Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV30164
(659 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_28806| Best HMM Match : No HMM Matches (HMM E-Value=.) 56 3e-08
SB_26063| Best HMM Match : No HMM Matches (HMM E-Value=.) 43 3e-04
SB_39030| Best HMM Match : adh_short (HMM E-Value=5.5e-34) 40 0.002
SB_40834| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.010
SB_6722| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.039
SB_30749| Best HMM Match : FARP (HMM E-Value=0.032) 34 0.089
SB_53468| Best HMM Match : E-MAP-115 (HMM E-Value=4.2) 34 0.12
SB_47084| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.12
SB_45236| Best HMM Match : PRP38 (HMM E-Value=0) 33 0.21
SB_13156| Best HMM Match : adh_short (HMM E-Value=0.00022) 33 0.27
SB_29494| Best HMM Match : Mpp10 (HMM E-Value=0.62) 32 0.48
SB_49989| Best HMM Match : GRP (HMM E-Value=2.3) 32 0.48
SB_19464| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.48
SB_44609| Best HMM Match : zf-CCHC (HMM E-Value=1.6e-24) 31 0.63
SB_26583| Best HMM Match : adh_short (HMM E-Value=2.4e-15) 31 1.1
SB_47412| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.1
SB_42091| Best HMM Match : E-MAP-115 (HMM E-Value=9.5) 30 1.5
SB_20320| Best HMM Match : Endonuclease_7 (HMM E-Value=0.24) 30 1.9
SB_47585| Best HMM Match : Umbravirus_LDM (HMM E-Value=1.7) 29 2.5
SB_32989| Best HMM Match : Umbravirus_LDM (HMM E-Value=3.4) 29 2.5
SB_20004| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.5
SB_16838| Best HMM Match : TolA (HMM E-Value=2) 29 2.5
SB_40518| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.4
SB_7499| Best HMM Match : zf-CCHC (HMM E-Value=0.00029) 29 3.4
SB_32768| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.4
SB_30317| Best HMM Match : Protamine_3 (HMM E-Value=0.091) 29 4.4
SB_50497| Best HMM Match : CH (HMM E-Value=0.0084) 28 5.9
SB_30234| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.9
SB_21078| Best HMM Match : P120R (HMM E-Value=0.44) 28 5.9
SB_15028| Best HMM Match : Drf_FH1 (HMM E-Value=0.84) 28 5.9
SB_16883| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.7
SB_3893| Best HMM Match : PaREP8 (HMM E-Value=2.4) 28 7.7
>SB_28806| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 614
Score = 55.6 bits (128), Expect = 3e-08
Identities = 35/127 (27%), Positives = 61/127 (48%), Gaps = 2/127 (1%)
Frame = +3
Query: 18 VALVVGAASNLGYQVLKKLTETHKGKIYFTTEDDTAGFNILKSLERPDIEISYLQMDITY 197
+A V G +GY V+++L + G I T D G +SL + Y ++D+T
Sbjct: 25 MAEVTGGNRGIGYCVVQQLVQQFDGNIILTARSDEQGEAACRSLNVGG-RVEYHKLDVTS 83
Query: 198 TKSIIRLRHYIQDLDERIDLLINITDYVAEKN--LSNFEKIRRTLSVNFYGYINFGKLVY 371
SI L ++Q+ +D+L+N + +++ S K + NF+G ++ +Y
Sbjct: 84 NDSIHELTLHVQEKYGGLDILVNNAGILKKESSGTSYARKAEDCVKTNFFGMLDVYNSMY 143
Query: 372 PLLNENA 392
PLL E A
Sbjct: 144 PLLKEQA 150
>SB_26063| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 426
Score = 42.7 bits (96), Expect = 3e-04
Identities = 31/144 (21%), Positives = 63/144 (43%), Gaps = 8/144 (5%)
Frame = +3
Query: 18 VALVVGAASNLGYQVLKKLTET--HKGKIYFTTEDDTAGFNILKSLERPDIEISYL--QM 185
+ L+ G ++ +G L + + K+Y T + IL+ R + + + Q+
Sbjct: 198 IVLITGCSTGIGLAAALLLAKDDGRRFKVYATMRN-LEKRGILEEAARRQLGDTLIVKQL 256
Query: 186 DITYTKSIIRLRHYIQDLDERIDLLINI--TDYVAEKNLSNFEKIRRTLSVNFYGYINFG 359
D+T +S+ + I + RID+L+N + +R +VNF+G +
Sbjct: 257 DVTSDESVTEVLQSIYSAERRIDVLVNNAGVGLIGVLETHTMSLVREMFNVNFFGVVRLT 316
Query: 360 KLVYPLL--NENARVVNVSGPAGL 425
K V P + N + ++N+ G+
Sbjct: 317 KAVIPKMKGNPSGHIINIPSIGGI 340
>SB_39030| Best HMM Match : adh_short (HMM E-Value=5.5e-34)
Length = 527
Score = 39.9 bits (89), Expect = 0.002
Identities = 27/142 (19%), Positives = 66/142 (46%), Gaps = 7/142 (4%)
Frame = +3
Query: 18 VALVVGAASNLGYQVLKKLTET--HKGKIYFTTEDDTAGFNILKSLERPDIEISYL-QMD 188
VA++ G +S +G L + + ++Y T + ++ + + + ++ ++D
Sbjct: 5 VAVITGCSSGIGLATASILAKDGEKRFRVYATMRNLDKKGSLESACQNALGDTLFIRELD 64
Query: 189 ITYTKSIIRLRHYIQDLDERIDLLINIT--DYVAEKNLSNFEKIRRTLSVNFYGYINFGK 362
++ S+ + I + + RID+L+N ++ ++ T + NF+G + K
Sbjct: 65 VSSDDSVEEALNAIYEEEGRIDILVNNAGISHIGMLETQTQSLVKETFNTNFFGVLRMSK 124
Query: 363 LVYPLL--NENARVVNVSGPAG 422
V P + + + ++N+S AG
Sbjct: 125 AVIPRMKSDHSGHIINISSTAG 146
>SB_40834| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1299
Score = 37.5 bits (83), Expect = 0.010
Identities = 38/184 (20%), Positives = 73/184 (39%)
Frame = +2
Query: 2 GRYVQRSAGRRRRKQPRIPSLKKTHRDSQRKNLLHYRR*HSRLQHPQEPGEARHRNQLLA 181
G + +R RRR+++ R ++ R +RK +R R + + + R + +
Sbjct: 1027 GSHERRKRKRRRKRKRRRKRKRRRKRKRRRKRKRRRKRKRRRKRKRRRKRQRRRKRKRRR 1086
Query: 182 NGHHVYKEHHQTEALHPGSRRKDRFADKHHRLCGREEFI*FRKNPKNFER*LLRIHKLWE 361
K + + R++ R + + R + RK + +R R K
Sbjct: 1087 KRKRRRKRKRRRKRKRRRKRKRRRKRKRRRKRQRRRKRKRRRKRKRRRKRQRRRKRKRRR 1146
Query: 362 ACVPATERER*SRKRVWTSWSSSHNRKRRYKKENQRSHIDRR*TGRFDPRIRTRRKKGSR 541
+R+R +++ RKRR K++ +R RR R R R R++K R
Sbjct: 1147 KRQRRRKRQRRRKRKRRRKRKRRRKRKRRRKRKRRRKRKRRRKRKRRRKRKRRRKRKRRR 1206
Query: 542 EDRR 553
+ +R
Sbjct: 1207 KRKR 1210
Score = 37.5 bits (83), Expect = 0.010
Identities = 40/182 (21%), Positives = 73/182 (40%), Gaps = 2/182 (1%)
Frame = +2
Query: 14 QRSAGRRRRKQPRIPSLKKTHRDSQRKNLLHYRR*HSRLQHPQEPGEARHRNQLLANGHH 193
+R RRR+++ R ++ R +RK +R R + + + R + +
Sbjct: 1055 RRKRKRRRKRKRRRKRKRRRKRQRRRKRKRRRKRKRRRKRKRRRKRKRRRKRKRRRKRKR 1114
Query: 194 VYKEHHQTEALHPGSRRKDRFADKHHRLCGREEFI*FRKNPKNFER*LLRIHKLWEACVP 373
K + + R++ R + + R + RK + +R R K
Sbjct: 1115 RRKRQRRRKRKRRRKRKRRRKRQRRRKRKRRRKRQRRRKRQRRRKRKRRRKRKRRRKRKR 1174
Query: 374 ATERER*SRKRVWTSWSSSHNRKRRYKKENQRSHIDRR*TGRFDPRIRTRRKKG--SRED 547
+R+R +++ RKRR K++ +R RR R R R R++K SRE+
Sbjct: 1175 RRKRKRRRKRKRRRKRKRRRKRKRRRKRKRRRKRKRRRKRKRRRKRKRRRKRKSLMSREN 1234
Query: 548 RR 553
RR
Sbjct: 1235 RR 1236
Score = 28.3 bits (60), Expect = 5.9
Identities = 31/111 (27%), Positives = 47/111 (42%), Gaps = 2/111 (1%)
Frame = +2
Query: 227 HPGS--RRKDRFADKHHRLCGREEFI*FRKNPKNFER*LLRIHKLWEACVPATERER*SR 400
H GS RRK + K R R+ RK + +R R K +R+R +
Sbjct: 1025 HAGSHERRKRKRRRKRKRRRKRKRR---RKRKRRRKRKRRRKRKRRRKRKRRRKRQRRRK 1081
Query: 401 KRVWTSWSSSHNRKRRYKKENQRSHIDRR*TGRFDPRIRTRRKKGSREDRR 553
++ RKRR K++ +R RR R R R R++K R+ +R
Sbjct: 1082 RKRRRKRKRRRKRKRRRKRKRRRKRKRRRKRKRRRKRQRRRKRKRRRKRKR 1132
>SB_6722| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 320
Score = 35.5 bits (78), Expect = 0.039
Identities = 25/108 (23%), Positives = 50/108 (46%), Gaps = 4/108 (3%)
Frame = +3
Query: 24 LVVGAASNLGYQVLKKLTETHKGKIYFTTEDDTAGFN----ILKSLERPDIEISYLQMDI 191
++ GA S +G +V + L K ++ D G I++S D+E+ ++D+
Sbjct: 76 IITGANSGIGMEVARDLA-WRKARVIMACRDVHKGMKAAAEIVQSAGNMDVEVK--KLDL 132
Query: 192 TYTKSIIRLRHYIQDLDERIDLLINITDYVAEKNLSNFEKIRRTLSVN 335
SI + + + R+D+LIN Y+ + +K+ TL ++
Sbjct: 133 ASFASIREFAKEVNEEESRVDVLINNAGYLGSQK-KTVDKLEYTLQLH 179
>SB_30749| Best HMM Match : FARP (HMM E-Value=0.032)
Length = 2565
Score = 34.3 bits (75), Expect = 0.089
Identities = 47/190 (24%), Positives = 76/190 (40%), Gaps = 5/190 (2%)
Frame = +2
Query: 5 RYVQRSAGRRRRKQPRIPSLKKTHRDSQRKNLLHYRR*HSRLQHPQEPGEARHRNQLLAN 184
R ++R RRRR+ RI ++ R +RK L RR + + G R R +
Sbjct: 363 RKLRRRRNRRRRRLRRIRRRRRRRRRRRRK-LRRRRRRRPLRRRRRRGGRRRRRGRQGRG 421
Query: 185 GHHVYKE-----HHQTEALHPGSRRKDRFADKHHRLCGREEFI*FRKNPKNFER*LLRIH 349
G+ + +E + +HP +K RF R+ R + RK P N L +
Sbjct: 422 GYDLPREIGIRSGEKRIVIHPRKDKK-RFLV---RVNNRRKPFNLRKIPPN----LSGLR 473
Query: 350 KLWEACVPATERER*SRKRVWTSWSSSHNRKRRYKKENQRSHIDRR*TGRFDPRIRTRRK 529
+ P + R R+R R+RR ++ ++ +R T R R RR+
Sbjct: 474 RFLVRRRPIRRQRRRRRRRRRRRRRQRRRRRRRRRRNRRKRRRRKRRTARRKRRELRRRR 533
Query: 530 KGSREDRRLG 559
+ RR G
Sbjct: 534 LRMKRGRRGG 543
Score = 29.5 bits (63), Expect = 2.5
Identities = 18/62 (29%), Positives = 31/62 (50%)
Frame = +2
Query: 437 RKRRYKKENQRSHIDRR*TGRFDPRIRTRRKKGSREDRRLGHECACREQSGIKRCNLSTA 616
R+R +++ +R RR R R R RR++ R+ RR A R++ ++R L
Sbjct: 478 RRRPIRRQRRRRRRRRRRRRRQRRRRRRRRRRNRRKRRRRKRRTARRKRRELRRRRLRMK 537
Query: 617 QG 622
+G
Sbjct: 538 RG 539
Score = 29.5 bits (63), Expect = 2.5
Identities = 22/91 (24%), Positives = 38/91 (41%)
Frame = +2
Query: 5 RYVQRSAGRRRRKQPRIPSLKKTHRDSQRKNLLHYRR*HSRLQHPQEPGEARHRNQLLAN 184
R ++R RRRR++ R ++ R +R+N RR R ++ E R R +
Sbjct: 480 RPIRRQRRRRRRRRRRRRRQRRRRRRRRRRNRRKRRR-RKRRTARRKRRELRRRRLRMKR 538
Query: 185 GHHVYKEHHQTEALHPGSRRKDRFADKHHRL 277
G + G +R+ R ++ RL
Sbjct: 539 GRRGGSRNRGLRRGRRGRKRRPRLGRRNRRL 569
Score = 28.3 bits (60), Expect = 5.9
Identities = 24/73 (32%), Positives = 32/73 (43%)
Frame = +2
Query: 398 RKRVWTSWSSSHNRKRRYKKENQRSHIDRR*TGRFDPRIRTRRKKGSREDRRLGHECACR 577
R+R + R+RR ++ R H RR R RIR R +K R RR +
Sbjct: 1638 RRRRRKRQARRRRRRRRRERRRLRRH-KRRVKRRIKRRIRRRIRKARRRIRRFRR---LQ 1693
Query: 578 EQSGIKRCNLSTA 616
+ GIKR L A
Sbjct: 1694 RRRGIKRQRLVPA 1706
>SB_53468| Best HMM Match : E-MAP-115 (HMM E-Value=4.2)
Length = 583
Score = 33.9 bits (74), Expect = 0.12
Identities = 19/91 (20%), Positives = 38/91 (41%), Gaps = 5/91 (5%)
Frame = +2
Query: 17 RSAGRRRRKQPRIPSLKKTHRDSQRKNLLHYRR*HSRLQHPQEPGEAR-HRNQLLANGH- 190
+ + +R + P +++H++ ++ H +R H H + E R H + H
Sbjct: 443 KERSQEKRSHEKRPHEERSHKERSQEKRSHEKRPHEERSHEERSEEERTHEERSHRKYHM 502
Query: 191 ---HVYKEHHQTEALHPGSRRKDRFADKHHR 274
H+ K+H + + +RKD H R
Sbjct: 503 RKDHMKKKHKRKDQKRKYHKRKDHMGKDHMR 533
Score = 31.5 bits (68), Expect = 0.63
Identities = 13/84 (15%), Positives = 35/84 (41%)
Frame = +2
Query: 17 RSAGRRRRKQPRIPSLKKTHRDSQRKNLLHYRR*HSRLQHPQEPGEARHRNQLLANGHHV 196
+ + +R + P +++H + + H R H + ++ + +H+ + +H
Sbjct: 463 KERSQEKRSHEKRPHEERSHEERSEEERTHEERSHRKYHMRKDHMKKKHKRKDQKRKYHK 522
Query: 197 YKEHHQTEALHPGSRRKDRFADKH 268
K+H + + +RK+ H
Sbjct: 523 RKDHMGKDHMRKDQKRKNHMRKDH 546
>SB_47084| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 355
Score = 33.9 bits (74), Expect = 0.12
Identities = 23/94 (24%), Positives = 43/94 (45%), Gaps = 5/94 (5%)
Frame = +3
Query: 204 SIIRLRHYIQDL---DERIDLLINITDYVAEKNLSNFEKIRRTLSVNFYGYINFGKLVYP 374
S+I +R + +D+ ++R+D+L+N N + VN G+ ++
Sbjct: 130 SLISVRKFAEDVMREEKRLDILVNNAGVYQPANKKTVDGFETQFGVNHLGHFLLTNMLLD 189
Query: 375 LLNENA--RVVNVSGPAGLLATIENEDIRKRISD 470
LL +A R+V VS G A ++ + K +D
Sbjct: 190 LLKASAPSRIVVVSSRLGFRANLDFDAFDKEDTD 223
>SB_45236| Best HMM Match : PRP38 (HMM E-Value=0)
Length = 381
Score = 33.1 bits (72), Expect = 0.21
Identities = 22/76 (28%), Positives = 34/76 (44%)
Frame = +2
Query: 371 PATERER*SRKRVWTSWSSSHNRKRRYKKENQRSHIDRR*TGRFDPRIRTRRKKGSREDR 550
P +R R S + + +R RR+ ++ R R + R R RR+ SRE R
Sbjct: 277 PDRDRPRDSERDRYRDIERDRHRDRRHSRDRDRKRSRSRDRRKSRSRSRDRRRSRSRERR 336
Query: 551 RLGHECACREQSGIKR 598
R + RE+S +R
Sbjct: 337 RDDRKRRSRERSPKRR 352
>SB_13156| Best HMM Match : adh_short (HMM E-Value=0.00022)
Length = 233
Score = 32.7 bits (71), Expect = 0.27
Identities = 16/42 (38%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
Frame = +3
Query: 306 EKIRRTLSVNFYGYINFGKLVYPLLN-ENARVVNVSGPAGLL 428
E+ ++ VN +G + K PLL E RVVN+S AG++
Sbjct: 59 EEYKQIAEVNLWGTVRMTKAFLPLLKREKGRVVNISSVAGMV 100
>SB_29494| Best HMM Match : Mpp10 (HMM E-Value=0.62)
Length = 631
Score = 31.9 bits (69), Expect = 0.48
Identities = 24/80 (30%), Positives = 40/80 (50%)
Frame = +2
Query: 80 DSQRKNLLHYRR*HSRLQHPQEPGEARHRNQLLANGHHVYKEHHQTEALHPGSRRKDRFA 259
+ ++ N + SRLQ P + +A RN+L +Y E ++T L PGS ++D
Sbjct: 258 EKEKVNSSEIEKESSRLQSPNKGKQATVRNKLT-----IYAEPNKTATL-PGSNQQDSKK 311
Query: 260 DKHHRLCGREEFI*FRKNPK 319
D + G+ + F+K PK
Sbjct: 312 DSISKPLGKNLGV-FKKMPK 330
>SB_49989| Best HMM Match : GRP (HMM E-Value=2.3)
Length = 181
Score = 31.9 bits (69), Expect = 0.48
Identities = 26/96 (27%), Positives = 41/96 (42%), Gaps = 6/96 (6%)
Frame = +2
Query: 17 RSAGRRRRKQPRIPSLKKTHRDSQRKNLLHYRR*HSRLQHPQEPGEAR--HRNQLLANGH 190
R +G+ ++ K+ HR+S + H+R QH + G+A+ HR A H
Sbjct: 45 RGSGQAKQHHRVSGQAKQHHRESGQAKQ-HHRGSGQAKQHHRGSGQAKQHHRGSGQAKQH 103
Query: 191 H----VYKEHHQTEALHPGSRRKDRFADKHHRLCGR 286
H K+HH+ R A +HHR G+
Sbjct: 104 HRGSGQAKQHHRGSGQAKQHHRGSGQAKQHHRGSGQ 139
>SB_19464| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1653
Score = 31.9 bits (69), Expect = 0.48
Identities = 25/83 (30%), Positives = 36/83 (43%), Gaps = 2/83 (2%)
Frame = +2
Query: 383 RER*SRKRVWTSWSSSHNRKRRYKKENQRSHIDRR*TGRFDPRIRTRRKKGSREDRRLGH 562
R+R R+R +R+ R ++ +R +RR FD R R RR+K R R
Sbjct: 809 RDREDRERRDREDRERRDREDRERERREREDRERREKEEFDKRDRERREKDDRRPREDDR 868
Query: 563 E--CACREQSGIKRCNLSTAQGN 625
E RE+ K +S Q N
Sbjct: 869 ERVRGRREEHVPKPAEVSRTQAN 891
>SB_44609| Best HMM Match : zf-CCHC (HMM E-Value=1.6e-24)
Length = 283
Score = 31.5 bits (68), Expect = 0.63
Identities = 18/70 (25%), Positives = 41/70 (58%), Gaps = 1/70 (1%)
Frame = +2
Query: 416 SWSSSHNRKRRYKKENQRSH-IDRR*TGRFDPRIRTRRKKGSREDRRLGHECACREQSGI 592
SW++S ++ + K +++ I+ + D +I ++KK RED++LG E + ++S
Sbjct: 38 SWTTSEGKQSKNKDTGEKTESIELK-----DRKIEKKKKKRQREDKQLGEEPSKVKKSKT 92
Query: 593 KRCNLSTAQG 622
++ ++ T +G
Sbjct: 93 EQEHVKTEKG 102
>SB_26583| Best HMM Match : adh_short (HMM E-Value=2.4e-15)
Length = 355
Score = 30.7 bits (66), Expect = 1.1
Identities = 35/141 (24%), Positives = 58/141 (41%), Gaps = 11/141 (7%)
Frame = +3
Query: 33 GAASNLGYQVLK-----KLTETHKGKIYFTTEDDTAGFNILKSLERPDIEISYLQMDITY 197
G NL Y++ K L+ + ++ E A + D +I L MD+T
Sbjct: 53 GIGENLAYELAKFGCKLVLSARRRSELERVKEQCIAIAKEANTSYNADQDILVLPMDVTE 112
Query: 198 TKSIIRLRHYIQDLDERIDLLINITDYVAEKNLS----NFEKIRRTLSVNFYGYINFGKL 365
L + D +ID+LIN + +++ L+ E + L +NF ++ K
Sbjct: 113 YDKHTELVRSVLDHFNKIDILINNSGR-SQRGLAVETPGIEVEKAMLDLNFLAVVSLTKA 171
Query: 366 VYPLLNE--NARVVNVSGPAG 422
V P + E N +V S AG
Sbjct: 172 VLPHMIERKNGHIVVTSSVAG 192
>SB_47412| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 252
Score = 30.7 bits (66), Expect = 1.1
Identities = 24/75 (32%), Positives = 30/75 (40%), Gaps = 4/75 (5%)
Frame = +2
Query: 344 IHKLWEACV----PATERER*SRKRVWTSWSSSHNRKRRYKKENQRSHIDRR*TGRFDPR 511
+H EAC P + R R R+ T H R+ R R H R R PR
Sbjct: 140 VHGAREACAIGPYPLSRRHT-RRPRLHTRRPRLHRRRTRLHTRRPRLHTRRPRLHRRRPR 198
Query: 512 IRTRRKKGSREDRRL 556
+ TRR + R RL
Sbjct: 199 LHTRRPRRHRRRPRL 213
>SB_42091| Best HMM Match : E-MAP-115 (HMM E-Value=9.5)
Length = 274
Score = 30.3 bits (65), Expect = 1.5
Identities = 19/71 (26%), Positives = 31/71 (43%)
Frame = +2
Query: 341 RIHKLWEACVPATERER*SRKRVWTSWSSSHNRKRRYKKENQRSHIDRR*TGRFDPRIRT 520
R + L E T R R+ + + S+ RK++ KKE ++ R R R +
Sbjct: 58 RFYSLLEESTTTTVMPRAKRRSIACLYKSTEERKKKKKKERKKVREREREREREREREKE 117
Query: 521 RRKKGSREDRR 553
R ++ RE R
Sbjct: 118 RERERERERER 128
>SB_20320| Best HMM Match : Endonuclease_7 (HMM E-Value=0.24)
Length = 417
Score = 29.9 bits (64), Expect = 1.9
Identities = 17/40 (42%), Positives = 22/40 (55%)
Frame = +3
Query: 258 LINITDYVAEKNLSNFEKIRRTLSVNFYGYINFGKLVYPL 377
L IT +A + FE+ LSVN +GY N K +YPL
Sbjct: 84 LSGITFPMALNEIDKFERNNTELSVNVFGYEN--KSIYPL 121
>SB_47585| Best HMM Match : Umbravirus_LDM (HMM E-Value=1.7)
Length = 421
Score = 29.5 bits (63), Expect = 2.5
Identities = 16/42 (38%), Positives = 22/42 (52%)
Frame = +2
Query: 131 QHPQEPGEARHRNQLLANGHHVYKEHHQTEALHPGSRRKDRF 256
+HP H +QL+A HHV K HHQ + G+ R+ F
Sbjct: 265 KHPVLLPRKHHVSQLVALHHHV-KVHHQGRLITSGATRQAGF 305
>SB_32989| Best HMM Match : Umbravirus_LDM (HMM E-Value=3.4)
Length = 279
Score = 29.5 bits (63), Expect = 2.5
Identities = 16/42 (38%), Positives = 22/42 (52%)
Frame = +2
Query: 131 QHPQEPGEARHRNQLLANGHHVYKEHHQTEALHPGSRRKDRF 256
+HP H +QL+A HHV K HHQ + G+ R+ F
Sbjct: 123 KHPVLLPRKHHVSQLVALHHHV-KVHHQGRLITSGATRQAGF 163
>SB_20004| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 297
Score = 29.5 bits (63), Expect = 2.5
Identities = 16/42 (38%), Positives = 22/42 (52%)
Frame = +2
Query: 131 QHPQEPGEARHRNQLLANGHHVYKEHHQTEALHPGSRRKDRF 256
+HP H +QL+A HHV K HHQ + G+ R+ F
Sbjct: 92 KHPVLLPRKHHVSQLVALHHHV-KVHHQGRLITSGATRQAGF 132
>SB_16838| Best HMM Match : TolA (HMM E-Value=2)
Length = 371
Score = 29.5 bits (63), Expect = 2.5
Identities = 16/76 (21%), Positives = 32/76 (42%)
Frame = +2
Query: 14 QRSAGRRRRKQPRIPSLKKTHRDSQRKNLLHYRR*HSRLQHPQEPGEARHRNQLLANGHH 193
+R +++R+Q ++ R Q+K RR + + PQ+ + + + Q H
Sbjct: 66 KRQQQKQKRQQQEQKLQQQQRRQQQQKRQPQQRRQQQQQRQPQQKSQQQQQQQQPQQPSH 125
Query: 194 VYKEHHQTEALHPGSR 241
+E HQ G +
Sbjct: 126 GQQEPHQRRLFQNGQQ 141
>SB_40518| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1000
Score = 29.1 bits (62), Expect = 3.4
Identities = 18/41 (43%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
Frame = +3
Query: 6 AMCNVALVVGAASNLGYQVLKKL-TETHKGKIYFTTEDDTA 125
A N V+G AS+ VLK + T H G I FT ED+ A
Sbjct: 190 ATINAMEVIGIASSTRNTVLKLVATVLHLGNIQFTEEDNQA 230
>SB_7499| Best HMM Match : zf-CCHC (HMM E-Value=0.00029)
Length = 846
Score = 29.1 bits (62), Expect = 3.4
Identities = 15/42 (35%), Positives = 22/42 (52%)
Frame = +2
Query: 131 QHPQEPGEARHRNQLLANGHHVYKEHHQTEALHPGSRRKDRF 256
+HP H +QL+A HH+ K HHQ + G+ R+ F
Sbjct: 475 KHPVLLPRKHHVSQLVALHHHI-KVHHQGRLITSGATRQAGF 515
>SB_32768| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1393
Score = 28.7 bits (61), Expect = 4.4
Identities = 38/160 (23%), Positives = 70/160 (43%), Gaps = 2/160 (1%)
Frame = +2
Query: 125 RLQHPQEPGEARHRNQLLANGHHVYKEHHQTEALHPGSRRKDRFADKHHRLCGREEFI*F 304
R++ +E GE+R R +++ +E + EA R ++R A++ R EE +
Sbjct: 1019 RVRGRRERGESRSREEIMREE----EERERREA--DRRREEERIAEQKRR--DDEERLRR 1070
Query: 305 RKNPKNFER*LLRIH--KLWEACVPATERER*SRKRVWTSWSSSHNRKRRYKKENQRSHI 478
+ + E R K E ER+R +R+ R+R+ ++E +R
Sbjct: 1071 EEEERRLEEERRREEERKREEVRRLEEERKREEERRLAEQRRVEEERRRKEEEEQRRREE 1130
Query: 479 DRR*TGRFDPRIRTRRKKGSREDRRLGHECACREQSGIKR 598
+ R + R+R ++ E+RRL E RE+ +R
Sbjct: 1131 EERRRREEEDRLREEARR-REEERRLEDERWEREREEERR 1169
>SB_30317| Best HMM Match : Protamine_3 (HMM E-Value=0.091)
Length = 761
Score = 28.7 bits (61), Expect = 4.4
Identities = 25/70 (35%), Positives = 30/70 (42%), Gaps = 9/70 (12%)
Frame = +2
Query: 416 SWSSSHNRKRRYKKENQRSHIDRR*TGRFDPR-------IRTRRKKGSREDR-RLGH-EC 568
SWS + +R R + + RSH R R R RT R K S E R R H E
Sbjct: 430 SWSHTRSRSRSHTRSRSRSHTRSRSRSRIRSRSRSQELDSRTLRSKKSFERRSRASHRES 489
Query: 569 ACREQSGIKR 598
R +S KR
Sbjct: 490 RSRSKSRTKR 499
>SB_50497| Best HMM Match : CH (HMM E-Value=0.0084)
Length = 2086
Score = 28.3 bits (60), Expect = 5.9
Identities = 17/57 (29%), Positives = 29/57 (50%)
Frame = +1
Query: 28 SSAPQATSDTKS*KNSQRLTKEKSTSLQKMTQPASTSSRAWRGPTSKSATCKWTSRI 198
SSA T + K + + +T +K T+PA+T++ + P S +A K TS +
Sbjct: 1781 SSAKTTTRPASTTKKLATSSTKPATDDKKQTKPATTTNASKTRPASSAAKPKPTSAV 1837
>SB_30234| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 5222
Score = 28.3 bits (60), Expect = 5.9
Identities = 21/81 (25%), Positives = 35/81 (43%), Gaps = 1/81 (1%)
Frame = +3
Query: 315 RRTLSVNFYGYINFGKLVYPLLNENARVVNVSGPAGLLATIENEDIRKRISDPTL-TEDE 491
R L + Y + + L E A S + A E E+++K++ + ED+
Sbjct: 4471 RAKLELKEKHYKEYADCLNQLTPEQAEEHRKSVEKAMAAARELEEVKKKLDEQRAENEDK 4530
Query: 492 LVALIQEYEHAARRGVEKTEG 554
L QE+E RR +E+ G
Sbjct: 4531 LRQQNQEFEEEQRRRLEEEMG 4551
>SB_21078| Best HMM Match : P120R (HMM E-Value=0.44)
Length = 585
Score = 28.3 bits (60), Expect = 5.9
Identities = 20/74 (27%), Positives = 33/74 (44%)
Frame = +1
Query: 34 APQATSDTKS*KNSQRLTKEKSTSLQKMTQPASTSSRAWRGPTSKSATCKWTSRIQRASS 213
A Q + + Q T+ + TSLQ QPA +G + A + ++ +Q AS
Sbjct: 111 AQQQQQQQQQQQQQQPATQPQHTSLQAGAQPAPNQGSTGQGAAPQGAPLQKSTNLQGASV 170
Query: 214 D*GTTSRI*TKGSI 255
TT+ + KG +
Sbjct: 171 ---TTAGLLAKGGL 181
>SB_15028| Best HMM Match : Drf_FH1 (HMM E-Value=0.84)
Length = 944
Score = 28.3 bits (60), Expect = 5.9
Identities = 17/57 (29%), Positives = 29/57 (50%)
Frame = +1
Query: 28 SSAPQATSDTKS*KNSQRLTKEKSTSLQKMTQPASTSSRAWRGPTSKSATCKWTSRI 198
SSA T + K + + +T +K T+PA+T++ + P S +A K TS +
Sbjct: 639 SSAKTTTRPASTTKKLATSSTKPATDDKKQTKPATTTNASKTRPASSAAKPKPTSAV 695
>SB_16883| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 181
Score = 27.9 bits (59), Expect = 7.7
Identities = 16/45 (35%), Positives = 26/45 (57%), Gaps = 4/45 (8%)
Frame = +3
Query: 237 LDERIDLLINITDYVAEKNLSNFEKIRRTLS----VNFYGYINFG 359
LD+R L ++ T Y K +S E++R+T S +F G+I+ G
Sbjct: 61 LDKRTYLTLDETGYTIRKTISQGEEVRKTESHFSPEDFQGFISEG 105
>SB_3893| Best HMM Match : PaREP8 (HMM E-Value=2.4)
Length = 339
Score = 27.9 bits (59), Expect = 7.7
Identities = 21/76 (27%), Positives = 30/76 (39%), Gaps = 1/76 (1%)
Frame = +2
Query: 401 KRVWT-SWSSSHNRKRRYKKENQRSHIDRR*TGRFDPRIRTRRKKGSREDRRLGHECACR 577
KRV T SS H K+E+ SH + + D R R + R + H+
Sbjct: 167 KRVETFPGSSRHEHSGSRKREHMESHRHSKHSHGQDKDQRKERIEDERRSKDGHHDLGHE 226
Query: 578 EQSGIKRCNLSTAQGN 625
++ KR QGN
Sbjct: 227 DKKSTKRSEKEKPQGN 242
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,718,098
Number of Sequences: 59808
Number of extensions: 445380
Number of successful extensions: 1930
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 1573
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1856
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1693527500
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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