Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV30164
(659 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY217747-1|AAP45005.1| 246|Apis mellifera short-chain dehydroge... 34 0.001
DQ468657-1|ABE02558.1| 322|Apis mellifera 1,4,5-trisphosphate r... 27 0.16
AB193550-1|BAD66824.1| 699|Apis mellifera soluble guanylyl cycl... 24 1.5
DQ325089-1|ABD14103.1| 185|Apis mellifera complementary sex det... 23 2.6
DQ325088-1|ABD14102.1| 185|Apis mellifera complementary sex det... 23 2.6
AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein. 23 2.6
AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein. 23 3.4
AF134818-1|AAD40234.1| 130|Apis mellifera lambda crystallin-lik... 22 4.5
AF388659-3|AAK71993.1| 548|Apis mellifera 1D-myo-inositol-trisp... 22 6.0
DQ435329-1|ABD92644.1| 150|Apis mellifera OBP12 protein. 21 7.9
>AY217747-1|AAP45005.1| 246|Apis mellifera short-chain
dehydrogenase/reductase protein.
Length = 246
Score = 34.3 bits (75), Expect = 0.001
Identities = 33/142 (23%), Positives = 65/142 (45%), Gaps = 6/142 (4%)
Frame = +3
Query: 18 VALVVGAASNLGYQVLKKLTETHKGKIYFTTEDDTAGFNILKSLERPDIEISYLQMDITY 197
VALV GA S +G +++ L I + D +++ L+ ++ LQ D++
Sbjct: 9 VALVTGANSGIGKCLIECLVGKGMKVIGIAPQVDKMK-TLVEELKSKPGKLVPLQCDLSN 67
Query: 198 TKSIIRLRHYIQDLDERIDLLINITDYVAEKNLSNFEKI--RRTLSVNFYGYINFGKLVY 371
I+++ +++ ID+LIN + L N E + ++ +N G + V
Sbjct: 68 QNDILKVIEWVEKNLGAIDILINNATINIDVTLQNDEVLDWKKIFDINLLGLTCMIQEVL 127
Query: 372 PLLNE----NARVVNVSGPAGL 425
L+ + N +VN++ +GL
Sbjct: 128 KLMKKKGINNGIIVNINDASGL 149
>DQ468657-1|ABE02558.1| 322|Apis mellifera 1,4,5-trisphosphate
receptor protein.
Length = 322
Score = 27.1 bits (57), Expect = 0.16
Identities = 15/59 (25%), Positives = 25/59 (42%)
Frame = +2
Query: 383 RER*SRKRVWTSWSSSHNRKRRYKKENQRSHIDRR*TGRFDPRIRTRRKKGSREDRRLG 559
R+ + +W S + KK+N+ D + P++ T KKGS D +G
Sbjct: 190 RQSVEKSELWVYKSKASEEHGNKKKKNKEDEDDGATPRKAPPQLSTTDKKGSAIDLDIG 248
>AB193550-1|BAD66824.1| 699|Apis mellifera soluble guanylyl cyclase
alpha 1 subunit protein.
Length = 699
Score = 23.8 bits (49), Expect = 1.5
Identities = 10/30 (33%), Positives = 16/30 (53%)
Frame = +1
Query: 88 KEKSTSLQKMTQPASTSSRAWRGPTSKSAT 177
+EK+ SL + P + R W G T ++ T
Sbjct: 457 REKNVSLLHLIFPPDIAKRLWLGETIEAKT 486
>DQ325089-1|ABD14103.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 23.0 bits (47), Expect = 2.6
Identities = 11/41 (26%), Positives = 18/41 (43%)
Frame = +2
Query: 422 SSSHNRKRRYKKENQRSHIDRR*TGRFDPRIRTRRKKGSRE 544
S S +R R Y+K+ + + + R +R SRE
Sbjct: 3 SCSRDRNREYRKDRRYEKLHNEKEKLLEERTNRKRNSRSRE 43
>DQ325088-1|ABD14102.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 23.0 bits (47), Expect = 2.6
Identities = 11/41 (26%), Positives = 18/41 (43%)
Frame = +2
Query: 422 SSSHNRKRRYKKENQRSHIDRR*TGRFDPRIRTRRKKGSRE 544
S S +R R Y+K+ + + + R +R SRE
Sbjct: 3 SCSRDRNREYRKDRRYEKLHNEKEKLLEERTNRKRNSRSRE 43
>AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 23.0 bits (47), Expect = 2.6
Identities = 19/88 (21%), Positives = 37/88 (42%), Gaps = 3/88 (3%)
Frame = +2
Query: 20 SAGRRRRKQPRIPSLKKTHRDSQRKNLLHYRR*HSRLQHPQEPGEARHRNQLLANGHHVY 199
S G R R R S + DS+ ++ YR R E + +++ H+V
Sbjct: 216 SLGSRSRSFQRTSSCHSRYEDSRHEDRNSYRNDGERSCSRDRSREYKKKDRRYDQLHNVE 275
Query: 200 KEH---HQTEALHPGSRRKDRFADKHHR 274
++H + + SR +++ + K+ R
Sbjct: 276 EKHLRERTSRRRYSRSREREQKSYKNER 303
>AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein.
Length = 400
Score = 22.6 bits (46), Expect = 3.4
Identities = 13/41 (31%), Positives = 17/41 (41%)
Frame = +2
Query: 422 SSSHNRKRRYKKENQRSHIDRR*TGRFDPRIRTRRKKGSRE 544
S S +R R YKK+ + + R RR SRE
Sbjct: 252 SCSRDRSREYKKDRRYDQLHNVEEKHLRERTSRRRYSRSRE 292
>AF134818-1|AAD40234.1| 130|Apis mellifera lambda crystallin-like
protein protein.
Length = 130
Score = 22.2 bits (45), Expect = 4.5
Identities = 9/21 (42%), Positives = 14/21 (66%)
Frame = +3
Query: 39 ASNLGYQVLKKLTETHKGKIY 101
A++L + +KK ET+K IY
Sbjct: 55 AAHLNAEGMKKYCETYKNSIY 75
>AF388659-3|AAK71993.1| 548|Apis mellifera
1D-myo-inositol-trisphosphate 3-kinaseisoform C protein.
Length = 548
Score = 21.8 bits (44), Expect = 6.0
Identities = 9/18 (50%), Positives = 11/18 (61%)
Frame = +2
Query: 434 NRKRRYKKENQRSHIDRR 487
+R RRY K S +DRR
Sbjct: 19 SRSRRYSKRFSSSIVDRR 36
>DQ435329-1|ABD92644.1| 150|Apis mellifera OBP12 protein.
Length = 150
Score = 21.4 bits (43), Expect = 7.9
Identities = 8/26 (30%), Positives = 16/26 (61%)
Frame = +3
Query: 42 SNLGYQVLKKLTETHKGKIYFTTEDD 119
SN+ + LKKL ++ + +I E++
Sbjct: 38 SNMTFHELKKLRDSSEARIKLINEEE 63
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 183,867
Number of Sequences: 438
Number of extensions: 3897
Number of successful extensions: 25
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 19855845
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -