Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV30160
(709 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At2g21410.1 68415.m02548 vacuolar proton ATPase, putative simila... 143 9e-35
At4g39080.1 68417.m05534 vacuolar proton ATPase, putative simila... 142 3e-34
At2g28520.1 68415.m03465 vacuolar proton ATPase, putative simila... 136 1e-32
At2g28620.1 68415.m03479 kinesin motor protein-related 31 0.99
At1g08260.1 68414.m00911 DNA-directed DNA polymerase epsilon cat... 30 1.7
At4g36470.1 68417.m05179 S-adenosyl-L-methionine:carboxyl methyl... 29 3.0
At4g26965.1 68417.m03880 NADH:ubiquinone oxidoreductase family p... 29 4.0
At1g13920.1 68414.m01633 remorin family protein contains Pfam do... 28 5.3
At5g03420.1 68418.m00295 dentin sialophosphoprotein-related cont... 28 7.0
At3g08760.1 68416.m01018 protein kinase family protein contains ... 28 7.0
At1g61140.1 68414.m06888 SNF2 domain-containing protein / helica... 28 7.0
At5g48520.1 68418.m05999 expressed protein similar to unknown pr... 27 9.2
At1g68790.1 68414.m07863 expressed protein 27 9.2
At1g55540.1 68414.m06356 proline-rich family protein contains pr... 27 9.2
At1g06750.1 68414.m00717 hypothetical protein 27 9.2
At1g04280.1 68414.m00419 expressed protein 27 9.2
>At2g21410.1 68415.m02548 vacuolar proton ATPase, putative similar
to vacuolar proton ATPase 100-kDa subunit from
Dictyostelium discoideum P|1384136|gb|AAB49621
Length = 821
Score = 143 bits (347), Expect = 9e-35
Identities = 80/215 (37%), Positives = 130/215 (60%), Gaps = 13/215 (6%)
Frame = +2
Query: 98 MFRSEEMALCQLFIQPEAAYTSVSELGEAGSVQFRDLNPDVNAFQRKFVNEVRRCDEMER 277
+ RSE M L Q+ + E+A+ +VS LG+ G VQF+DLN + + FQR + +++RC EM R
Sbjct: 17 LMRSEPMQLVQVIVPMESAHLTVSYLGDLGLVQFKDLNSEKSPFQRTYAAQIKRCGEMAR 76
Query: 278 KLRYIEAEVHKDGVHIPAVKEAPRAPNPREIIDLEAHLEKTENEILELSHNAVNLKQNYL 457
K+R+ + ++ K GV KE N ++ D+E LE+ E E++E++ N L+++Y
Sbjct: 77 KIRFFKEQMSKAGV---TPKETLDRENDIDLDDVEVKLEELEAELVEINANNDKLQRSYN 133
Query: 458 ELTELRHVLEKTEAFF-------TAQ------EEIGMDSLTKSLISDETGQQAATRGRLG 598
EL E + VLEK FF TAQ E++G D L L+ +E + +LG
Sbjct: 134 ELVEYKLVLEKAGEFFASAHRSATAQQSEIETEQVGEDLLEAPLLQEEKSVDPTKQVKLG 193
Query: 599 FVAGVVQRERVPAFERMLWRISRGNVFLRRAELDK 703
F+ G+V RE+ FER+L+R +RGN+F+R++ +++
Sbjct: 194 FLTGLVPREKSMVFERILFRATRGNIFIRQSVIEE 228
>At4g39080.1 68417.m05534 vacuolar proton ATPase, putative similar
to Swiss-Prot:Q93050 vacuolar proton translocating
ATPase 116 kDa subunit A isoform 1 (Clathrin-coated
vesicle/synaptic vesicle proton pump 116 kDa subunit,
Vacuolar proton pump subunit 1, Vacuolar adenosine
triphosphatase subunit Ac116) [Homo sapiens]
Length = 821
Score = 142 bits (343), Expect = 3e-34
Identities = 79/217 (36%), Positives = 129/217 (59%), Gaps = 13/217 (5%)
Frame = +2
Query: 98 MFRSEEMALCQLFIQPEAAYTSVSELGEAGSVQFRDLNPDVNAFQRKFVNEVRRCDEMER 277
+ RSE M L QL + E+A+ +VS LG+ G VQF+DLN + + FQR + +++RC EM R
Sbjct: 16 LMRSETMQLVQLIVPMESAHLTVSYLGDLGLVQFKDLNSEKSPFQRTYAAQIKRCGEMAR 75
Query: 278 KLRYIEAEVHKDGVHIPAVKEAPRAPNPREIIDLEAHLEKTENEILELSHNAVNLKQNYL 457
K+R+ ++ K GV PA KE N ++ D+E L + E E++E++ N L+++Y
Sbjct: 76 KIRFFRDQMSKAGV--PA-KEMQGKENDIDLDDVEVKLGELEAELVEINANNDKLQRSYN 132
Query: 458 ELTELRHVLEKTEAFF-------------TAQEEIGMDSLTKSLISDETGQQAATRGRLG 598
EL E + VL+K FF T ++ G D L L+ +E + + +LG
Sbjct: 133 ELMEYKLVLQKAGEFFSSAHRSAADQQRETESQQAGEDLLESPLLQEEKSIDSTKQVKLG 192
Query: 599 FVAGVVQRERVPAFERMLWRISRGNVFLRRAELDKPL 709
F+ G+V RE+ FER+L+R +RGN+F+R+ +++P+
Sbjct: 193 FLTGLVPREKSMVFERILFRATRGNIFIRQTVIEEPV 229
>At2g28520.1 68415.m03465 vacuolar proton ATPase, putative similar
to Swiss-Prot:Q93050 vacuolar proton translocating
ATPase 116 kDa subunit A isoform 1 (Clathrin-coated
vesicle/synaptic vesicle proton pump 116 kDa subunit,
Vacuolar proton pump subunit 1, Vacuolar adenosine
triphosphatase subunit Ac116) [Homo sapiens]
Length = 817
Score = 136 bits (330), Expect = 1e-32
Identities = 81/221 (36%), Positives = 124/221 (56%), Gaps = 17/221 (7%)
Frame = +2
Query: 98 MFRSEEMALCQLFIQPEAAYTSVSELGEAGSVQFRDLNPDVNAFQRKFVNEVRRCDEMER 277
+ RSE+M L QL I E+A+ S++ LGE G +QFRDLN D + FQR F N+V+RC EM R
Sbjct: 13 LMRSEKMTLVQLIIPVESAHRSITYLGELGLLQFRDLNADKSPFQRTFANQVKRCGEMSR 72
Query: 278 KLRYIEAEVHKDGVHIPAVKEAPRAPNPREII--DLEAHLEKTENEILELSHNAVNLKQN 451
KLR+ + ++ K G+ +PR +I DLE L E+E+LE++ N+ L+Q
Sbjct: 73 KLRFFKDQIDKAGLRC-----SPRLEIEPDIALGDLERQLADHEHEVLEMNSNSEKLRQT 127
Query: 452 YLELTELRHVLEKTEAFFTAQ------EEIGMDSL---------TKSLISDETGQQAATR 586
Y EL E + VLEK F + EEI + T SL+ E + +
Sbjct: 128 YNELLEFKIVLEKASGFLVSSNTHAIGEEIELHESTYSNNGFIETASLLEQEMNPGHSNQ 187
Query: 587 GRLGFVAGVVQRERVPAFERMLWRISRGNVFLRRAELDKPL 709
L F++G++ ++++ FERML+R +RGN+ + D+ +
Sbjct: 188 SGLRFISGIINKDKLLKFERMLFRATRGNMLFNQTTSDEEI 228
>At2g28620.1 68415.m03479 kinesin motor protein-related
Length = 1076
Score = 30.7 bits (66), Expect = 0.99
Identities = 30/111 (27%), Positives = 49/111 (44%), Gaps = 4/111 (3%)
Frame = +2
Query: 212 PDVNAFQRKFVNEVRRCDEMERKLRYIEAEVHKDGVHIP----AVKEAPRAPNPREIIDL 379
P+VN K E+ER + + A K+G++IP +EA + +I +
Sbjct: 396 PEVNQKMMKSAIMKDLYSEIERLKQEVYAAREKNGIYIPKERYTQEEAEKKAMADKIEQM 455
Query: 380 EAHLEKTENEILELSHNAVNLKQNYLELTELRHVLEKTEAFFTAQEEIGMD 532
E E + +I++L N +Q L LR L+KTE E+ +D
Sbjct: 456 EVEGEAKDKQIIDL-QELYNSEQ--LVTAGLREKLDKTEKKLYETEQALLD 503
>At1g08260.1 68414.m00911 DNA-directed DNA polymerase epsilon
catalytic subunit, putative similar to SP|Q07864 DNA
polymerase epsilon, catalytic subunit A (EC 2.7.7.7)
(DNA polymerase II subunit A) {Homo sapiens}; contains
Pfam profiles: PF03175 DNA polymerase type B, organellar
and viral, PF00136 DNA polymerase family B, PF03104 DNA
polymerase family B, exonuclease domain
Length = 2271
Score = 29.9 bits (64), Expect = 1.7
Identities = 17/53 (32%), Positives = 32/53 (60%), Gaps = 1/53 (1%)
Frame = +2
Query: 362 REIIDLEAHLEKTENEILELSHNAVNLKQNYLEL-TELRHVLEKTEAFFTAQE 517
+E +DL+ HL + + L++S + V Q +E+ +L H++E+ +A F A E
Sbjct: 122 KEDLDLKNHLSGLQKKYLKISFDTV---QQLMEVKRDLLHIVERNQAKFDALE 171
>At4g36470.1 68417.m05179 S-adenosyl-L-methionine:carboxyl
methyltransferase family protein similar to SAM:jasmonic
acid carboxyl methyltransferase (JMT)[GI:13676829] and
to SAM:salicylic acid carboxyl methyltransferase
(SAMT)[GI:6002712][Clarkia breweri]
Length = 371
Score = 29.1 bits (62), Expect = 3.0
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = -2
Query: 432 ALCDSSRISFSVFSKCASKSMISLG 358
A C + FS+F +C SK M+S G
Sbjct: 197 AYCSQFKEDFSIFLRCRSKEMVSAG 221
>At4g26965.1 68417.m03880 NADH:ubiquinone oxidoreductase family
protein contains Pfam profile PF05071: NADH:ubiquinone
oxidoreductase 17.2 kD subunit
Length = 184
Score = 28.7 bits (61), Expect = 4.0
Identities = 16/62 (25%), Positives = 30/62 (48%), Gaps = 6/62 (9%)
Frame = +2
Query: 236 KFVNEVRRCDEMERKLRYIEAEVHKDGVHIPAV------KEAPRAPNPREIIDLEAHLEK 397
K+ + + D ++ R+++ +D IP + RAP P E+I+LEA E+
Sbjct: 26 KYFSRMEEIDGFVKEKRWVKFRREEDPTSIPVEWICWLNGQRKRAPTPEEMIELEARRER 85
Query: 398 TE 403
+
Sbjct: 86 VK 87
>At1g13920.1 68414.m01633 remorin family protein contains Pfam
domain, PF03763: Remorin, C-terminal region
Length = 345
Score = 28.3 bits (60), Expect = 5.3
Identities = 13/46 (28%), Positives = 23/46 (50%)
Frame = -3
Query: 155 KPPRAE*RVGTKPSPRSGT*PPSCTISRTPFKVKQRCARSSIKTHT 18
+PPR + + T+ PR+ PP +S +P ++ R + HT
Sbjct: 187 EPPRIQPPLRTRSEPRAPPPPPPPLLSPSPLRLPPRETKRQSSEHT 232
>At5g03420.1 68418.m00295 dentin sialophosphoprotein-related
contains weak similarity to Swiss-Prot:Q9NZW4 dentin
sialophosphoprotein precursor [Homo sapiens]
Length = 583
Score = 27.9 bits (59), Expect = 7.0
Identities = 21/69 (30%), Positives = 35/69 (50%), Gaps = 5/69 (7%)
Frame = +2
Query: 308 KDGVHIPAVKEAPRAPNPREI---IDLEAHLE--KTENEILELSHNAVNLKQNYLELTEL 472
K+ +H V + R + R+ +D + H E K EN++ E+ L Q LEL+ L
Sbjct: 406 KEIIHATEVNSSDRNSDQRDGSVGLDTDPHHETRKRENQV-EIDRLRFMLDQKELELSRL 464
Query: 473 RHVLEKTEA 499
+ +EK +A
Sbjct: 465 KEQIEKEKA 473
>At3g08760.1 68416.m01018 protein kinase family protein contains
protein kinase domain, Pfam:PF00069
Length = 557
Score = 27.9 bits (59), Expect = 7.0
Identities = 11/19 (57%), Positives = 14/19 (73%)
Frame = +3
Query: 318 STFPPSRKPPVLPTRGKSL 374
S PP R+P V PTRG++L
Sbjct: 501 SPSPPPRRPSVSPTRGRTL 519
>At1g61140.1 68414.m06888 SNF2 domain-containing protein / helicase
domain-containing protein / zinc finger protein-related
similar to ATPase [Homo sapiens] GI:531196; contains
Pfam profiles PF00271: Helicase conserved C-terminal
domain, PF00176: SNF2 family N-terminal domain, PF00097:
Zinc finger, C3HC4 type (RING finger)
Length = 1287
Score = 27.9 bits (59), Expect = 7.0
Identities = 13/37 (35%), Positives = 17/37 (45%)
Frame = +3
Query: 579 PLAAASGSLRAWSSASACPHSNGCCGVSREATSSCDV 689
P S SL+ W S S CGVS+ +SC +
Sbjct: 96 PAHTCSASLKDWFSLSQGEQPVETCGVSQSEMTSCSI 132
>At5g48520.1 68418.m05999 expressed protein similar to unknown
protein (gb|AAB97010.1)
Length = 671
Score = 27.5 bits (58), Expect = 9.2
Identities = 17/57 (29%), Positives = 27/57 (47%)
Frame = +2
Query: 449 NYLELTELRHVLEKTEAFFTAQEEIGMDSLTKSLISDETGQQAATRGRLGFVAGVVQ 619
N+L RH K + +G SL K + S+ G +ATR R+G + ++Q
Sbjct: 436 NHLVNQLARHQFLKLACQLEKKNMLGAFSLLKVIESELQGYLSATRSRVGRCSALIQ 492
>At1g68790.1 68414.m07863 expressed protein
Length = 1085
Score = 27.5 bits (58), Expect = 9.2
Identities = 29/115 (25%), Positives = 55/115 (47%), Gaps = 4/115 (3%)
Frame = +2
Query: 230 QRKFVNEVRRCDEMERKLRYIEA--EVH-KDGVHIPAVKEAPRAPNPREIIDLEAHLEKT 400
+ KF R+ E+ERKL+ +E +VH ++ + + +EA A ++ DL+ +K
Sbjct: 191 EEKFSVMNRKSSELERKLKEVETREKVHQREHLSLVTEREAHEAVFYKQREDLQEWEKKL 250
Query: 401 ENEILELSHNAVNLKQNYLELTELRHVLEKTEAFF-TAQEEIGMDSLTKSLISDE 562
E LS ++ + E +EK E Q++I S+ KS ++++
Sbjct: 251 TLEEDRLSEVKRSINHREERVMENERTIEKKEKILENLQQKI---SVAKSELTEK 302
>At1g55540.1 68414.m06356 proline-rich family protein contains
proline rich extensin domain, INTERPRO:IPR002965
Length = 915
Score = 27.5 bits (58), Expect = 9.2
Identities = 20/55 (36%), Positives = 29/55 (52%)
Frame = -2
Query: 612 TPATNPRRPRVAAC*PVSSDIKDLVKESMPISSCAVKKASVFSRTCLNSVNSR*F 448
TP + A+ PVSS +D V S+PISS V + FS T ++V++ F
Sbjct: 347 TPLDSTSTLFTASSAPVSSSSQDPVPASIPISSAPVPQ--TFSVTSTSTVSATGF 399
>At1g06750.1 68414.m00717 hypothetical protein
Length = 495
Score = 27.5 bits (58), Expect = 9.2
Identities = 21/59 (35%), Positives = 24/59 (40%)
Frame = +2
Query: 86 RMGAMFRSEEMALCQLFIQPEAAYTSVSELGEAGSVQFRDLNPDVNAFQRKFVNEVRRC 262
+MG R E LC+L A Y S SE E F PD + K V E RC
Sbjct: 44 QMGFKDRRECPNLCKL----AAEYISKSECCEEDIYSFFSEEPDADTLFIKLVEEFERC 98
>At1g04280.1 68414.m00419 expressed protein
Length = 480
Score = 27.5 bits (58), Expect = 9.2
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = +3
Query: 282 SGTSRPRCTKMVSTFPPSRKPPVLPTRG 365
SG+S P CT+++S +++ PVL G
Sbjct: 156 SGSSEPHCTEVMSPVAHNKRSPVLLLMG 183
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,829,508
Number of Sequences: 28952
Number of extensions: 384388
Number of successful extensions: 1316
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1248
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1311
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1526202912
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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