Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30158
         (748 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_04_0311 + 21936812-21937861                                         29   3.0  
04_04_0057 + 22410167-22411330                                         29   3.9  
05_03_0373 - 13194723-13195847,13196219-13196809                       29   5.2  
12_01_0951 - 9471391-9471597,9471857-9471966,9473173-9473278,947...    28   6.9  
10_08_0849 + 21040043-21040199,21040620-21040678,21040925-210424...    28   6.9  
03_02_0076 - 5451137-5452503,5453439-5453866,5453949-5454046,545...    28   9.1  
01_06_0751 + 31690411-31690443,31692900-31694240                       28   9.1  
01_03_0163 + 13346586-13347809                                         28   9.1  

>02_04_0311 + 21936812-21937861
          Length = 349

 Score = 29.5 bits (63), Expect = 3.0
 Identities = 16/44 (36%), Positives = 20/44 (45%)
 Frame = +3

Query: 501 WLEEKVDLPSIFENISEVPERVDPQPPAAVLASSPFVTSQPTEE 632
           WLE  V  P    N+ + P    P PPA   +SSP   +   EE
Sbjct: 154 WLEGHVTCPLCRANLEKQPA---PSPPAVEFSSSPAAAAAAAEE 194


>04_04_0057 + 22410167-22411330
          Length = 387

 Score = 29.1 bits (62), Expect = 3.9
 Identities = 13/35 (37%), Positives = 17/35 (48%)
 Frame = +3

Query: 501 WLEEKVDLPSIFENISEVPERVDPQPPAAVLASSP 605
           WLE +V  P    N+ + P    P P AA  + SP
Sbjct: 164 WLESRVTCPLCRANLEKPPPPPPPPPAAAAASPSP 198


>05_03_0373 - 13194723-13195847,13196219-13196809
          Length = 571

 Score = 28.7 bits (61), Expect = 5.2
 Identities = 13/32 (40%), Positives = 19/32 (59%)
 Frame = -3

Query: 446 VSEFGGTWFQLRR*WRVETRSVIDFDLRCSAR 351
           V+E G  + QL+R WR + R ++D D R   R
Sbjct: 502 VNEAGQRFLQLQREWRSDARGIVDGDGRFKFR 533


>12_01_0951 -
           9471391-9471597,9471857-9471966,9473173-9473278,
           9474719-9475060,9475598-9475647,9476745-9477717
          Length = 595

 Score = 28.3 bits (60), Expect = 6.9
 Identities = 14/31 (45%), Positives = 16/31 (51%)
 Frame = +2

Query: 578 PGSGSSFKSFCDLAAH*RTAAGIRNGLWCCR 670
           P  GS   S C +     TA G+  GLWCCR
Sbjct: 397 PSCGSYTASACPIYVESGTA-GVVIGLWCCR 426


>10_08_0849 +
           21040043-21040199,21040620-21040678,21040925-21042494,
           21042583-21042710,21042793-21043033,21043160-21043710
          Length = 901

 Score = 28.3 bits (60), Expect = 6.9
 Identities = 11/40 (27%), Positives = 24/40 (60%)
 Frame = +3

Query: 450 LLQQLDSQCKQENIFSNWLEEKVDLPSIFENISEVPERVD 569
           L+ +L   C ++N+   +LE+++  P +FE +    +R+D
Sbjct: 754 LVLELSELCAEQNLEVWYLEDELISPCMFEELQNQGDRID 793


>03_02_0076 -
           5451137-5452503,5453439-5453866,5453949-5454046,
           5454723-5454836,5455017-5455111,5455222-5455283,
           5455398-5455557,5456247-5456643
          Length = 906

 Score = 27.9 bits (59), Expect = 9.1
 Identities = 16/41 (39%), Positives = 21/41 (51%)
 Frame = +3

Query: 564 VDPQPPAAVLASSPFVTSQPTEELLREFETGYGAVEXTHLH 686
           VD   PAA+L  + F TS   EELL      Y ++  + LH
Sbjct: 292 VDAYQPAALLFCTSFETSYGVEELLNTLPRLYDSLLPSLLH 332


>01_06_0751 + 31690411-31690443,31692900-31694240
          Length = 457

 Score = 27.9 bits (59), Expect = 9.1
 Identities = 13/29 (44%), Positives = 16/29 (55%), Gaps = 1/29 (3%)
 Frame = +3

Query: 543 ISEVPERVD-PQPPAAVLASSPFVTSQPT 626
           I E+P+R + P PPAA     P  T Q T
Sbjct: 195 IDELPDRAEAPPPPAAASTEQPEATEQAT 223


>01_03_0163 + 13346586-13347809
          Length = 407

 Score = 27.9 bits (59), Expect = 9.1
 Identities = 13/22 (59%), Positives = 15/22 (68%)
 Frame = +3

Query: 249 SWAAAIDLLTNDECRLLLEVED 314
           SW AA+D +T DE R LLE  D
Sbjct: 115 SWDAALDGITADEARALLESID 136


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,013,270
Number of Sequences: 37544
Number of extensions: 386326
Number of successful extensions: 1122
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1080
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1121
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1980691104
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)