Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30156
         (630 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M93691-1|AAA29366.1|  574|Anopheles gambiae protein ( Anopheles ...    29   0.092
AY578795-1|AAT07300.1|  441|Anopheles gambiae Gbb-60A2 protein.        25   2.6  
AY705405-1|AAU12514.1|  519|Anopheles gambiae nicotinic acetylch...    23   8.0  
AF008575-1|AAB87764.1|  525|Anopheles gambiae chitinase protein.       23   8.0  

>M93691-1|AAA29366.1|  574|Anopheles gambiae protein ( Anopheles
           gambiae RT2 retroposon. ).
          Length = 574

 Score = 29.5 bits (63), Expect = 0.092
 Identities = 18/58 (31%), Positives = 26/58 (44%), Gaps = 1/58 (1%)
 Frame = +1

Query: 217 REKALSHSLFYLKLGAGMTPDVAREPQSPTARRPSGSAVARAPPTTRFQ-RHAQPRVS 387
           R++ + +SL   K+G G      R+P +P  RR S     +     R Q    QPR S
Sbjct: 179 RDRDVLNSLLAAKVGGGQPSASPRQPPTPLPRRSSAQPQQQQQQQQRNQHEQEQPRAS 236


>AY578795-1|AAT07300.1|  441|Anopheles gambiae Gbb-60A2 protein.
          Length = 441

 Score = 24.6 bits (51), Expect = 2.6
 Identities = 14/61 (22%), Positives = 26/61 (42%), Gaps = 3/61 (4%)
 Frame = -2

Query: 236 WLNAFSRNTLRKSSVGGFSRRGIVISVKYNRLPNKRLL---IILSLFAHFSSYLRYMCSL 66
           W+   +   +++  V   + +GI + V Y   P K +L   + L L   F  Y  ++   
Sbjct: 220 WVELNATQAMQRWVVERVANKGIFVEVYYAESPRKEILPHEVGLILSNRFGRYQPFLVGY 279

Query: 65  C 63
           C
Sbjct: 280 C 280


>AY705405-1|AAU12514.1|  519|Anopheles gambiae nicotinic
           acetylcholine receptor subunitbeta 1 protein.
          Length = 519

 Score = 23.0 bits (47), Expect = 8.0
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = -1

Query: 609 RRHGLRWRGNIAWMRVPPKP 550
           R+  LRW   +  M VPP+P
Sbjct: 351 RKTRLRWMMEMPGMSVPPQP 370


>AF008575-1|AAB87764.1|  525|Anopheles gambiae chitinase protein.
          Length = 525

 Score = 23.0 bits (47), Expect = 8.0
 Identities = 8/21 (38%), Positives = 12/21 (57%)
 Frame = +2

Query: 350 QPASNDTRNHVSPSSCVASNP 412
           QP ++D  NH + S+    NP
Sbjct: 438 QPPTSDAPNHTTTSTTTEGNP 458


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 596,108
Number of Sequences: 2352
Number of extensions: 11773
Number of successful extensions: 31
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 31
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 61468785
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)