Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV30155
(526 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g20930.1 68417.m03033 3-hydroxyisobutyrate dehydrogenase, put... 84 5e-17
At1g18270.1 68414.m02280 ketose-bisphosphate aldolase class-II f... 66 2e-11
At4g29120.1 68417.m04168 6-phosphogluconate dehydrogenase NAD-bi... 65 2e-11
At1g71170.1 68414.m08212 6-phosphogluconate dehydrogenase NAD-bi... 65 2e-11
At1g71180.1 68414.m08213 6-phosphogluconate dehydrogenase NAD-bi... 64 4e-11
At3g25530.1 68416.m03174 6-phosphogluconate dehydrogenase NAD-bi... 62 3e-10
At1g17650.1 68414.m02185 6-phosphogluconate dehydrogenase NAD-bi... 58 4e-09
At5g34930.1 68418.m04119 arogenate dehydrogenase identical to ar... 36 0.017
At1g64190.1 68414.m07272 6-phosphogluconate dehydrogenase family... 33 0.089
At3g18240.2 68416.m02321 expressed protein 31 0.36
At3g18240.1 68416.m02320 expressed protein 31 0.36
At5g41670.2 68418.m05063 6-phosphogluconate dehydrogenase family... 31 0.63
At5g41670.1 68418.m05062 6-phosphogluconate dehydrogenase family... 31 0.63
At4g21460.1 68417.m03104 expressed protein 30 1.1
At1g15710.1 68414.m01885 prephenate dehydrogenase family protein... 29 1.9
At5g02330.1 68418.m00156 DC1 domain-containing protein contains ... 29 2.5
At3g06990.1 68416.m00830 DC1 domain-containing protein contains ... 29 2.5
At3g59130.1 68416.m06592 DC1 domain-containing protein contains ... 28 3.3
At4g23000.1 68417.m03318 calcineurin-like phosphoesterase family... 28 4.4
At2g36400.1 68415.m04467 expressed protein nearly identical to t... 28 4.4
At4g30790.1 68417.m04362 expressed protein 27 5.8
At2g02700.1 68415.m00210 DC1 domain-containing protein contains ... 27 5.8
At1g28690.1 68414.m03533 pentatricopeptide (PPR) repeat-containi... 27 5.8
At5g02360.1 68418.m00159 DC1 domain-containing protein contains ... 27 7.7
At2g45480.1 68415.m05656 expressed protein 27 7.7
At1g19110.1 68414.m02377 inter-alpha-trypsin inhibitor heavy cha... 27 7.7
>At4g20930.1 68417.m03033 3-hydroxyisobutyrate dehydrogenase,
putative similar to SP|P29266 3-hydroxyisobutyrate
dehydrogenase, mitochondrial precursor (EC 1.1.1.31)
{Rattus norvegicus}; contains Pfam profile PF03446: NAD
binding domain of 6-phosphogluconate dehydrogenase
Length = 347
Score = 84.2 bits (199), Expect = 5e-17
Identities = 54/163 (33%), Positives = 83/163 (50%), Gaps = 12/163 (7%)
Frame = +3
Query: 72 LYTAARRAYSSNTDKNVAFLGLGNMGGFMAANLVKKGFTVRGYDPSKDALNAAAKNGVTP 251
L+ + + +SN +NV F+GLGNMG M NL++ G+ V +D ++D + + GV+
Sbjct: 24 LHRFSSSSQNSNQFQNVGFIGLGNMGFRMVNNLIRAGYKVTVHDINRDVMKMFTEMGVSS 83
Query: 252 ANSIXXXXXXXXXXXSILTSNKVVLDVYLGKDGVVAHAK--KGSLLIDSSTIDPNVPKQI 425
+ ++L S+ V+DVY G +G++ + +L IDSSTIDP ++I
Sbjct: 84 RETPYEVAQDSEVVITMLPSSSHVMDVYTGTNGLLLGENDIRPALFIDSSTIDPQTTRKI 143
Query: 426 FPIALEKGLG----------FTDAPVSGGVMGAQNATLAFMAG 524
L DAPVSGGV+ A+ TL FM G
Sbjct: 144 SLAVSNCNLKEKRDNWEKPVMLDAPVSGGVLAAEAGTLTFMVG 186
>At1g18270.1 68414.m02280 ketose-bisphosphate aldolase class-II
family protein low similarity to KbaY
(tagatose-1,6-bisphosphate aldolase) [Escherichia coli]
GI:8895753; contains Pfam profile PF01116:
Fructose-bisphosphate aldolase class-II
Length = 1373
Score = 65.7 bits (153), Expect = 2e-11
Identities = 49/137 (35%), Positives = 63/137 (45%), Gaps = 3/137 (2%)
Frame = +3
Query: 120 VAFLGLGNMGGFMAANLVKKGFTVRGYDPSKDALNAAAKNGVTPANSIXXXXXXXXXXXS 299
+ F+GLG MG MAA+L+K F+V GYD K L G ANS
Sbjct: 324 IGFIGLGAMGFGMAAHLLKSNFSVCGYDVYKPTLVRFENAGGLAANSPAEVTKDVDVLVI 383
Query: 300 ILTSNKVVLDVYLGKDGVVAHAKKGSLLIDSSTIDPNVPKQIFPIALE---KGLGFTDAP 470
++T+ DV G G V G+ ++ +ST+ P Q+ LE K L DAP
Sbjct: 384 MVTNEVQAEDVLYGHLGAVEAIPSGATVVLASTVSPAFVSQL-ERRLENEGKDLKLVDAP 442
Query: 471 VSGGVMGAQNATLAFMA 521
VSGGV A L MA
Sbjct: 443 VSGGVKRAAMGELTIMA 459
Score = 39.5 bits (88), Expect = 0.001
Identities = 24/94 (25%), Positives = 47/94 (50%)
Frame = +3
Query: 120 VAFLGLGNMGGFMAANLVKKGFTVRGYDPSKDALNAAAKNGVTPANSIXXXXXXXXXXXS 299
V F+GL + +A++L++ GF V+ ++ S + + + G +S
Sbjct: 5 VGFVGLDSFSFELASSLLRSGFKVQAFEISTELVEKFIELGGHKCDSPADVGKAAAAVVV 64
Query: 300 ILTSNKVVLDVYLGKDGVVAHAKKGSLLIDSSTI 401
+L+ + DV G +GV+ +K ++L+ SSTI
Sbjct: 65 VLSHPDQIQDVIFGDEGVMKGLQKDAVLLLSSTI 98
>At4g29120.1 68417.m04168 6-phosphogluconate dehydrogenase
NAD-binding domain-containing protein similar to
SP|P23523 2-hydroxy-3-oxopropionate reductase (EC
1.1.1.60) (Tartronate semialdehyde reductase)
{Escherichia coli}; contains Pfam profile PF03446: NAD
binding domain of 6-phosphogluconate dehydrogenase
Length = 334
Score = 65.3 bits (152), Expect = 2e-11
Identities = 43/142 (30%), Positives = 70/142 (49%), Gaps = 1/142 (0%)
Frame = +3
Query: 102 SNTDKNVAFLGLGNMGGFMAANLVKKGFTVRGYDPSKDALNAAAKNGVTPANSIXXXXXX 281
SNT + ++G G MG M +L+K G+TV ++ + G A+S
Sbjct: 36 SNT--KIGWIGTGVMGRSMCGHLIKAGYTVTVFNRTISKAQTLIDMGANVADSPNSVAEQ 93
Query: 282 XXXXXSILTSNKVVLDVYLG-KDGVVAHAKKGSLLIDSSTIDPNVPKQIFPIALEKGLGF 458
+I+ V V L K G ++ ++G +L+D +T +P++ ++I A K
Sbjct: 94 SDVVFTIVGYPSDVRHVLLDPKSGALSGLRQGGVLVDMTTSEPSLAEEIAKAASFKNCFS 153
Query: 459 TDAPVSGGVMGAQNATLAFMAG 524
DAPVSGG +GA+N L+ AG
Sbjct: 154 IDAPVSGGDLGAKNGKLSIFAG 175
>At1g71170.1 68414.m08212 6-phosphogluconate dehydrogenase
NAD-binding domain-containing protein contains Pfam
profile: PF03446 NAD binding domain of
6-phosphogluconate
Length = 299
Score = 65.3 bits (152), Expect = 2e-11
Identities = 37/135 (27%), Positives = 64/135 (47%)
Frame = +3
Query: 120 VAFLGLGNMGGFMAANLVKKGFTVRGYDPSKDALNAAAKNGVTPANSIXXXXXXXXXXXS 299
+ ++G+G MG M ++++ G++V Y G ANS +
Sbjct: 16 IGWIGIGIMGSAMVSHILAAGYSVTVYARDLRKTKDLQTKGGRTANSPKELGEMSDVVFT 75
Query: 300 ILTSNKVVLDVYLGKDGVVAHAKKGSLLIDSSTIDPNVPKQIFPIALEKGLGFTDAPVSG 479
I+ ++ V + LG DGV++ K G + +D ++ P + ++I+ A + DAPVSG
Sbjct: 76 IVGNSNDVRSLLLGDDGVLSGLKPGGVTVDMTSSKPGLAREIYAEARRRDCWAVDAPVSG 135
Query: 480 GVMGAQNATLAFMAG 524
G GA+ L AG
Sbjct: 136 GDAGAREGKLTIFAG 150
>At1g71180.1 68414.m08213 6-phosphogluconate dehydrogenase
NAD-binding domain-containing protein similar to
SP|P23523 2-hydroxy-3-oxopropionate reductase (EC
1.1.1.60) (Tartronate semialdehyde reductase)
{Escherichia coli}; contains Pfam profile PF03446: NAD
binding domain of 6-phosphogluconate dehydrogenase
Length = 318
Score = 64.5 bits (150), Expect = 4e-11
Identities = 43/160 (26%), Positives = 70/160 (43%), Gaps = 3/160 (1%)
Frame = +3
Query: 54 ILSTQCLYTAARRAYSSNTDKN---VAFLGLGNMGGFMAANLVKKGFTVRGYDPSKDALN 224
IL + C T Y D + + ++G+G MG M ++++ G++V Y
Sbjct: 12 ILHSFCGNTEMETPYPKLIDPSKTRIGWIGIGIMGSAMVSHIIAAGYSVTVYARDLRKTK 71
Query: 225 AAAKNGVTPANSIXXXXXXXXXXXSILTSNKVVLDVYLGKDGVVAHAKKGSLLIDSSTID 404
G ANS +I+ + V + LG DGV++ G + +D ++
Sbjct: 72 DLQTKGARIANSPKELAEMSDVVFTIVGNFNDVRSLLLGDDGVLSGLTPGGVTVDMTSSK 131
Query: 405 PNVPKQIFPIALEKGLGFTDAPVSGGVMGAQNATLAFMAG 524
P + ++I A + DAPVSGG GA+ TL AG
Sbjct: 132 PGLAREIHAEARRRNCWAVDAPVSGGDAGAREGTLGIFAG 171
>At3g25530.1 68416.m03174 6-phosphogluconate dehydrogenase
NAD-binding domain-containing protein low similarity to
SP|P23523 2-hydroxy-3-oxopropionate reductase (EC
1.1.1.60) (Tartronate semialdehyde reductase)
{Escherichia coli}; contains Pfam profile PF03446: NAD
binding domain of 6-phosphogluconate dehydrogenase;
supporting cDNA gi|15375067|gb|AY044183.1|
Length = 289
Score = 61.7 bits (143), Expect = 3e-10
Identities = 40/134 (29%), Positives = 60/134 (44%)
Frame = +3
Query: 120 VAFLGLGNMGGFMAANLVKKGFTVRGYDPSKDALNAAAKNGVTPANSIXXXXXXXXXXXS 299
V FLGLG MG M+ NL+K GF V ++ + + ++G + S +
Sbjct: 3 VGFLGLGIMGKAMSMNLLKNGFKVTVWNRTLSKCDELVEHGASVCESPAEVIKKCKYTIA 62
Query: 300 ILTSNKVVLDVYLGKDGVVAHAKKGSLLIDSSTIDPNVPKQIFPIALEKGLGFTDAPVSG 479
+L+ L V K GV+ +G ID ST+D +I KG F + PVSG
Sbjct: 63 MLSDPCAALSVVFDKGGVLEQICEGKGYIDMSTVDAETSLKINEAITGKGGRFVEGPVSG 122
Query: 480 GVMGAQNATLAFMA 521
A++ L +A
Sbjct: 123 SKKPAEDGQLIILA 136
>At1g17650.1 68414.m02185 6-phosphogluconate dehydrogenase
NAD-binding domain-containing protein low similarity to
SP|P23523 2-hydroxy-3-oxopropionate reductase (EC
1.1.1.60) (Tartronate semialdehyde reductase)
{Escherichia coli}; contains Pfam profile PF03446: NAD
binding domain of 6-phosphogluconate dehydrogenase
Length = 343
Score = 58.0 bits (134), Expect = 4e-09
Identities = 38/134 (28%), Positives = 60/134 (44%)
Frame = +3
Query: 117 NVAFLGLGNMGGFMAANLVKKGFTVRGYDPSKDALNAAAKNGVTPANSIXXXXXXXXXXX 296
++ FLG+G MG MA NL+K G V ++ +K + G +S
Sbjct: 53 SIGFLGMGIMGSPMAQNLIKAGCDVTVWNRTKSKCDPLVGLGAKYKSSPEEVTATCDLTF 112
Query: 297 SILTSNKVVLDVYLGKDGVVAHAKKGSLLIDSSTIDPNVPKQIFPIALEKGLGFTDAPVS 476
++L + +DV GK+G + G +D ST+D I + G F +APVS
Sbjct: 113 AMLADPESAIDVACGKNGAIFGISSGKGYVDVSTVDVASSILISKQIKDTGALFLEAPVS 172
Query: 477 GGVMGAQNATLAFM 518
G A++ L F+
Sbjct: 173 GSKKPAEDGQLIFL 186
>At5g34930.1 68418.m04119 arogenate dehydrogenase identical to
arogenate dehydrogenase GI:16903098 from [Arabidopsis
thaliana]; contains Pfam profile: PF02153: prephenate
dehydrogenase
Length = 640
Score = 35.9 bits (79), Expect = 0.017
Identities = 18/43 (41%), Positives = 25/43 (58%)
Frame = +3
Query: 120 VAFLGLGNMGGFMAANLVKKGFTVRGYDPSKDALNAAAKNGVT 248
+ +G GN G F+ +VK+G TV Y S D + AAK GV+
Sbjct: 367 IGIVGFGNFGQFLGKTMVKQGHTVLAYSRS-DYTDEAAKLGVS 408
Score = 29.9 bits (64), Expect = 1.1
Identities = 15/43 (34%), Positives = 25/43 (58%)
Frame = +3
Query: 120 VAFLGLGNMGGFMAANLVKKGFTVRGYDPSKDALNAAAKNGVT 248
+A +G GN G F+A L+ +G + + S D +AA + GV+
Sbjct: 55 IAIIGFGNYGQFLAETLISQGHILFAHSRS-DHSSAARRLGVS 96
>At1g64190.1 68414.m07272 6-phosphogluconate dehydrogenase family
protein contains Pfam profiles: PF00393
6-phosphogluconate dehydrogenase C-terminal domain,
PF03446 NAD binding domain of 6-phosphogluconate
Length = 487
Score = 33.5 bits (73), Expect = 0.089
Identities = 36/134 (26%), Positives = 55/134 (41%), Gaps = 7/134 (5%)
Frame = +3
Query: 120 VAFLGLGNMGGFMAANLVKKGFTVRGYD--PSK--DALNAAAKNGVTPAN---SIXXXXX 278
+ GL MG +A N+ +KGF + Y+ SK + L+ AA G P + S
Sbjct: 9 IGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETLDRAAVEGNLPVSGQYSPRDFVL 68
Query: 279 XXXXXXSILTSNKVVLDVYLGKDGVVAHAKKGSLLIDSSTIDPNVPKQIFPIALEKGLGF 458
S++ K V D + + G +ID ++ A +KGL +
Sbjct: 69 SIQRPRSLIILVKAGAPVDQTIDAFSEYMEPGDCIIDGGNEWYQNTERRISEAEQKGLLY 128
Query: 459 TDAPVSGGVMGAQN 500
VSGG GA+N
Sbjct: 129 LGMGVSGGEEGARN 142
>At3g18240.2 68416.m02321 expressed protein
Length = 419
Score = 31.5 bits (68), Expect = 0.36
Identities = 20/51 (39%), Positives = 28/51 (54%), Gaps = 3/51 (5%)
Frame = +2
Query: 311 Q*SRARRVPGQRWRCGSCEKRIASDRFEY---DRSECSQTDLPYSLRERAG 454
Q R R + G+R+ G E I S+RFE+ +R +C +T Y L E AG
Sbjct: 328 QAKRLRELVGKRYHSGKDELTITSERFEHREENRKDCLRT--LYGLIEEAG 376
>At3g18240.1 68416.m02320 expressed protein
Length = 419
Score = 31.5 bits (68), Expect = 0.36
Identities = 20/51 (39%), Positives = 28/51 (54%), Gaps = 3/51 (5%)
Frame = +2
Query: 311 Q*SRARRVPGQRWRCGSCEKRIASDRFEY---DRSECSQTDLPYSLRERAG 454
Q R R + G+R+ G E I S+RFE+ +R +C +T Y L E AG
Sbjct: 328 QAKRLRELVGKRYHSGKDELTITSERFEHREENRKDCLRT--LYGLIEEAG 376
>At5g41670.2 68418.m05063 6-phosphogluconate dehydrogenase family
protein contains Pfam profiles: PF00393
6-phosphogluconate dehydrogenase C-terminal domain,
PF03446 NAD binding domain of 6-phosphogluconate
Length = 487
Score = 30.7 bits (66), Expect = 0.63
Identities = 38/138 (27%), Positives = 59/138 (42%), Gaps = 11/138 (7%)
Frame = +3
Query: 120 VAFLGLGNMGGFMAANLVKKGFTVRGYD--PSK--DALNAAAKNGVTPANSIXXXXXXXX 287
+ GL MG +A N+ KGF + Y+ SK + L+ A+ G P +
Sbjct: 9 IGLAGLAVMGQNLALNIADKGFPISVYNRTTSKVDETLDRASNEGKLP---VAGQYSPRD 65
Query: 288 XXXSILTSNKVVLDVYLGK--DGVVA----HAKKGSLLIDSSTI-DPNVPKQIFPIALEK 446
SI V++ V G D ++ + + G +ID N ++I A +K
Sbjct: 66 FVLSIQRPRSVIILVKAGAPVDQTISALSEYMEPGDCIIDGGNEWYQNTERRIVE-AEKK 124
Query: 447 GLGFTDAPVSGGVMGAQN 500
GL + VSGG GA+N
Sbjct: 125 GLLYLGMGVSGGEEGARN 142
>At5g41670.1 68418.m05062 6-phosphogluconate dehydrogenase family
protein contains Pfam profiles: PF00393
6-phosphogluconate dehydrogenase C-terminal domain,
PF03446 NAD binding domain of 6-phosphogluconate
Length = 487
Score = 30.7 bits (66), Expect = 0.63
Identities = 38/138 (27%), Positives = 59/138 (42%), Gaps = 11/138 (7%)
Frame = +3
Query: 120 VAFLGLGNMGGFMAANLVKKGFTVRGYD--PSK--DALNAAAKNGVTPANSIXXXXXXXX 287
+ GL MG +A N+ KGF + Y+ SK + L+ A+ G P +
Sbjct: 9 IGLAGLAVMGQNLALNIADKGFPISVYNRTTSKVDETLDRASNEGKLP---VAGQYSPRD 65
Query: 288 XXXSILTSNKVVLDVYLGK--DGVVA----HAKKGSLLIDSSTI-DPNVPKQIFPIALEK 446
SI V++ V G D ++ + + G +ID N ++I A +K
Sbjct: 66 FVLSIQRPRSVIILVKAGAPVDQTISALSEYMEPGDCIIDGGNEWYQNTERRIVE-AEKK 124
Query: 447 GLGFTDAPVSGGVMGAQN 500
GL + VSGG GA+N
Sbjct: 125 GLLYLGMGVSGGEEGARN 142
>At4g21460.1 68417.m03104 expressed protein
Length = 415
Score = 29.9 bits (64), Expect = 1.1
Identities = 19/53 (35%), Positives = 28/53 (52%), Gaps = 3/53 (5%)
Frame = +2
Query: 305 DQQ*SRARRVPGQRWRCGSCEKRIASDRFEY---DRSECSQTDLPYSLRERAG 454
+ Q R R + G+R+ G E I +RFE+ +R +C +T Y L E AG
Sbjct: 322 NHQAKRLRELVGKRYHSGKDELTITCERFEHREENRKDCLRT--LYGLIEEAG 372
>At1g15710.1 68414.m01885 prephenate dehydrogenase family protein
contains Pfam profile: PF02153 prephenate dehydrogenase
Length = 358
Score = 29.1 bits (62), Expect = 1.9
Identities = 15/52 (28%), Positives = 26/52 (50%), Gaps = 2/52 (3%)
Frame = +3
Query: 78 TAARRAYSSNTDKNVAFLGLGNMGGFMAANLVKKGFTVRGYDPS--KDALNA 227
T + Y ++ +A LG GN G F++ L++ G + + S DA N+
Sbjct: 47 TQLKSEYRKSSALKIAVLGFGNFGQFLSKTLIRHGHDLITHSRSDYSDAANS 98
>At5g02330.1 68418.m00156 DC1 domain-containing protein contains
Pfam profile PF03107: DC1 domain
Length = 656
Score = 28.7 bits (61), Expect = 2.5
Identities = 9/28 (32%), Positives = 17/28 (60%)
Frame = +2
Query: 332 VPGQRWRCGSCEKRIASDRFEYDRSECS 415
+P +W CG C K++ ++ Y ++CS
Sbjct: 301 LPSGKWSCGVCRKKVDNNCGAYTCNKCS 328
>At3g06990.1 68416.m00830 DC1 domain-containing protein contains
Pfam profile PF03107: DC1 domain
Length = 539
Score = 28.7 bits (61), Expect = 2.5
Identities = 13/44 (29%), Positives = 21/44 (47%)
Frame = +2
Query: 263 CCSR*WSRRGRFHIDQQ*SRARRVPGQRWRCGSCEKRIASDRFE 394
C S +R HID+ R + G ++C SC+K R++
Sbjct: 300 CASLPRRKRSILHIDKLDLRVKNKAGNHYKCRSCQKLFDGFRYK 343
>At3g59130.1 68416.m06592 DC1 domain-containing protein contains
Pfam profile PF03107: DC1 domain
Length = 329
Score = 28.3 bits (60), Expect = 3.3
Identities = 13/45 (28%), Positives = 23/45 (51%), Gaps = 1/45 (2%)
Frame = +2
Query: 377 ASDRFEYDRSECSQTDLPYSLRERAGIHRCT-CIWRSHGCSERYP 508
+ + ++D C ++D+P+ +RER + CT C H YP
Sbjct: 30 SEQKVKHDCFGCGKSDVPWEIRERPLYYYCTICDLEFHKNCLEYP 74
>At4g23000.1 68417.m03318 calcineurin-like phosphoesterase family
protein contains Pfam profile: PF00149 calcineurin-like
phosphoesterase
Length = 932
Score = 27.9 bits (59), Expect = 4.4
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = +2
Query: 356 GSCEKRIASDRFEYDRSECSQTDLP 430
G C+ R+A D Y R C+Q+D P
Sbjct: 630 GRCKLRMAGDLHHYMRHSCTQSDGP 654
>At2g36400.1 68415.m04467 expressed protein nearly identical to
transcription activator GRL3 [Arabidopsis thaliana]
GI:21539884 (unpublished); supporting cDNA
gi|21539883|gb|AY102636.1|
Length = 398
Score = 27.9 bits (59), Expect = 4.4
Identities = 10/22 (45%), Positives = 14/22 (63%)
Frame = +2
Query: 290 GRFHIDQQ*SRARRVPGQRWRC 355
GR +D + R RR G++WRC
Sbjct: 139 GRAAMDPEPGRCRRTDGKKWRC 160
>At4g30790.1 68417.m04362 expressed protein
Length = 1148
Score = 27.5 bits (58), Expect = 5.8
Identities = 14/39 (35%), Positives = 22/39 (56%)
Frame = -2
Query: 384 SEAILFSHEPQRHLCPGTRRARLYCWSIWKRPRRLHQRL 268
+EA+ E ++HL + +++C S KR R L QRL
Sbjct: 632 AEALQAKDEYEKHLLLMLKEKQMHCDSYEKRIRELEQRL 670
>At2g02700.1 68415.m00210 DC1 domain-containing protein contains
Pfam profile PF03107: DC1 domain
Length = 499
Score = 27.5 bits (58), Expect = 5.8
Identities = 10/27 (37%), Positives = 14/27 (51%)
Frame = +2
Query: 332 VPGQRWRCGSCEKRIASDRFEYDRSEC 412
+P +W CG C + I SD Y + C
Sbjct: 288 LPSGKWCCGICRREIDSDYGAYSCNVC 314
>At1g28690.1 68414.m03533 pentatricopeptide (PPR) repeat-containing
protein contains six TIGRFAM TIGR00756:
pentatricopeptide repeat domains; contains five Pfam
PF01535: PPR repeats
Length = 520
Score = 27.5 bits (58), Expect = 5.8
Identities = 15/33 (45%), Positives = 21/33 (63%), Gaps = 2/33 (6%)
Frame = +3
Query: 297 SILTSNKVVLDVY--LGKDGVVAHAKKGSLLID 389
S+LTS++V V+ + K GV H K GS L+D
Sbjct: 284 SVLTSHEVGQQVHAQIMKSGVYTHIKMGSSLLD 316
>At5g02360.1 68418.m00159 DC1 domain-containing protein contains
Pfam profile PF03107: DC1 domain
Length = 342
Score = 27.1 bits (57), Expect = 7.7
Identities = 8/27 (29%), Positives = 15/27 (55%)
Frame = +2
Query: 332 VPGQRWRCGSCEKRIASDRFEYDRSEC 412
+P +W CG C + + +D Y ++C
Sbjct: 130 LPSGKWSCGVCRQMVDNDYGAYSCNKC 156
>At2g45480.1 68415.m05656 expressed protein
Length = 429
Score = 27.1 bits (57), Expect = 7.7
Identities = 12/30 (40%), Positives = 18/30 (60%), Gaps = 3/30 (10%)
Frame = +2
Query: 281 SRRGRFHIDQ---Q*SRARRVPGQRWRCGS 361
S +G HID + +R RR G++WRC +
Sbjct: 76 SNKGVTHIDTLETEPTRCRRTDGKKWRCSN 105
>At1g19110.1 68414.m02377 inter-alpha-trypsin inhibitor heavy
chain-related similar to SP|Q61704 Inter-alpha-trypsin
inhibitor heavy chain H3 precursor {Mus musculus};
contains Pfam profile PF00092: von Willebrand factor
type A domain
Length = 754
Score = 27.1 bits (57), Expect = 7.7
Identities = 16/52 (30%), Positives = 23/52 (44%)
Frame = +3
Query: 315 KVVLDVYLGKDGVVAHAKKGSLLIDSSTIDPNVPKQIFPIALEKGLGFTDAP 470
K+ +Y GKD VA + + + SST P +P A+ G D P
Sbjct: 14 KLAKRIYFGKDRAVAAPRPPAPMDRSSTTQPYLPTAPMVYAVIPDPGIVDNP 65
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,716,799
Number of Sequences: 28952
Number of extensions: 277220
Number of successful extensions: 935
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 890
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 928
length of database: 12,070,560
effective HSP length: 76
effective length of database: 9,870,208
effective search space used: 967280384
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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