Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30154
         (530 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI00015BD1C8 Cluster: UPI00015BD1C8 related cluster; n...    33   3.1  
UniRef50_Q7RRR2 Cluster: Putative uncharacterized protein PY0065...    33   3.1  
UniRef50_Q8IC38 Cluster: Putative uncharacterized protein PF07_0...    33   5.4  
UniRef50_UPI000023F6FC Cluster: hypothetical protein FG11026.1; ...    32   7.2  
UniRef50_Q11YG9 Cluster: Possible sensor protein; n=1; Cytophaga...    32   9.5  
UniRef50_Q9AW36 Cluster: Splicing factor Prp8; n=1; Guillardia t...    32   9.5  

>UniRef50_UPI00015BD1C8 Cluster: UPI00015BD1C8 related cluster; n=1;
           unknown|Rep: UPI00015BD1C8 UniRef100 entry - unknown
          Length = 257

 Score = 33.5 bits (73), Expect = 3.1
 Identities = 14/43 (32%), Positives = 29/43 (67%)
 Frame = -1

Query: 305 FSALYYVIFYISKLIFTLKSKNPKGFKILFMVGSGLTVPLALL 177
           F+ L+Y++ +IS L++TLK+KN   + ++F++   L   + L+
Sbjct: 6   FNILFYLMAFISFLLYTLKAKNTIKYSLIFIMLGNLFYLIKLI 48


>UniRef50_Q7RRR2 Cluster: Putative uncharacterized protein PY00656;
           n=2; Plasmodium (Vinckeia)|Rep: Putative uncharacterized
           protein PY00656 - Plasmodium yoelii yoelii
          Length = 319

 Score = 33.5 bits (73), Expect = 3.1
 Identities = 21/56 (37%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
 Frame = +2

Query: 284 LHNIKH*IVSILKYSVNFDNNQSYSIFIAISKANKNHN-MNLNSDKYYEIIFLKMY 448
           LHNI++ I+ ILK  VN  N     +   I+K NKN N + +N    + I  + MY
Sbjct: 101 LHNIEN-IIPILKKEVNISNMYVKKLLDEINKINKNRNDIFMNKINIFYIRHILMY 155


>UniRef50_Q8IC38 Cluster: Putative uncharacterized protein PF07_0012;
            n=2; Plasmodium|Rep: Putative uncharacterized protein
            PF07_0012 - Plasmodium falciparum (isolate 3D7)
          Length = 1540

 Score = 32.7 bits (71), Expect = 5.4
 Identities = 19/47 (40%), Positives = 27/47 (57%), Gaps = 2/47 (4%)
 Frame = +2

Query: 314  ILKYSVNFDNNQ-SY-SIFIAISKANKNHNMNLNSDKYYEIIFLKMY 448
            ++ YS   +NN  +Y SI +    A KN N N+N DKY   IFL ++
Sbjct: 933  VIDYSGRVNNNSFTYPSILLRNKNALKNLNRNVNVDKYKRYIFLGIH 979


>UniRef50_UPI000023F6FC Cluster: hypothetical protein FG11026.1; n=1;
            Gibberella zeae PH-1|Rep: hypothetical protein FG11026.1
            - Gibberella zeae PH-1
          Length = 4747

 Score = 32.3 bits (70), Expect = 7.2
 Identities = 18/45 (40%), Positives = 24/45 (53%), Gaps = 2/45 (4%)
 Frame = +1

Query: 118  HCSRACSPPDGEWLLSLMDVSNARGTVKPLPT--INNILNPLGFL 246
            H SR+ S PDG   L L D S    TV PL    + ++ + LGF+
Sbjct: 4569 HASRSLSSPDGTQTLDLTDASIPTLTVTPLSVDLVGSLKSQLGFI 4613


>UniRef50_Q11YG9 Cluster: Possible sensor protein; n=1; Cytophaga
           hutchinsonii ATCC 33406|Rep: Possible sensor protein -
           Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469)
          Length = 631

 Score = 31.9 bits (69), Expect = 9.5
 Identities = 17/38 (44%), Positives = 25/38 (65%)
 Frame = -1

Query: 329 LNILVLKQFSALYYVIFYISKLIFTLKSKNPKGFKILF 216
           ++ L+L+    LYYVI+ I  LI+ L SKN  GF+ L+
Sbjct: 218 ISFLILRVTHYLYYVIYAIGILIY-LMSKNGTGFQYLW 254


>UniRef50_Q9AW36 Cluster: Splicing factor Prp8; n=1; Guillardia
           theta|Rep: Splicing factor Prp8 - Guillardia theta
           (Cryptomonas phi)
          Length = 2057

 Score = 31.9 bits (69), Expect = 9.5
 Identities = 13/45 (28%), Positives = 25/45 (55%)
 Frame = +2

Query: 311 SILKYSVNFDNNQSYSIFIAISKANKNHNMNLNSDKYYEIIFLKM 445
           S ++Y+  F NN+ Y   +   +  KN    LN+ +YY ++F ++
Sbjct: 22  SFIRYNYKFFNNRKYESRVLGFENEKNRISLLNTFRYYPLVFYRL 66


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 376,556,249
Number of Sequences: 1657284
Number of extensions: 6853521
Number of successful extensions: 20716
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 19080
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20620
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 33873797511
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)