Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30154
         (530 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF367178-1|AAK31264.1|  747|Drosophila melanogaster chromatin as...    28   6.9  
AE013599-1108|AAF58788.1|  747|Drosophila melanogaster CG12892-P...    28   6.9  
AF192484-1|AAF27346.1|  440|Drosophila melanogaster discs overgr...    28   9.1  
AF132558-1|AAD27857.1|  440|Drosophila melanogaster double-time ...    28   9.1  
AF055583-1|AAC39134.1|  440|Drosophila melanogaster casein kinas...    28   9.1  
AE014297-4701|AAF57109.1|  440|Drosophila melanogaster CG2048-PC...    28   9.1  
AE014297-4700|AAF57108.1|  440|Drosophila melanogaster CG2048-PB...    28   9.1  
AE014297-4699|AAF57110.1|  440|Drosophila melanogaster CG2048-PA...    28   9.1  

>AF367178-1|AAK31264.1|  747|Drosophila melanogaster chromatin
           assembly factor-1 p105subunit protein.
          Length = 747

 Score = 28.3 bits (60), Expect = 6.9
 Identities = 12/29 (41%), Positives = 18/29 (62%)
 Frame = +1

Query: 127 RACSPPDGEWLLSLMDVSNARGTVKPLPT 213
           R C  PDG+ LL+   +++  G VKP+ T
Sbjct: 245 RLCFTPDGKLLLTPSGITDYDGVVKPINT 273


>AE013599-1108|AAF58788.1|  747|Drosophila melanogaster CG12892-PA
           protein.
          Length = 747

 Score = 28.3 bits (60), Expect = 6.9
 Identities = 12/29 (41%), Positives = 18/29 (62%)
 Frame = +1

Query: 127 RACSPPDGEWLLSLMDVSNARGTVKPLPT 213
           R C  PDG+ LL+   +++  G VKP+ T
Sbjct: 245 RLCFTPDGKLLLTPSGITDYDGVVKPINT 273


>AF192484-1|AAF27346.1|  440|Drosophila melanogaster discs overgrown
           protein.
          Length = 440

 Score = 27.9 bits (59), Expect = 9.1
 Identities = 11/23 (47%), Positives = 15/23 (65%)
 Frame = -1

Query: 455 P*HTFLKKLFRNTYHYLDSCYDF 387
           P +  L+KLFRN +H L   YD+
Sbjct: 264 PDYCHLRKLFRNLFHRLGFTYDY 286


>AF132558-1|AAD27857.1|  440|Drosophila melanogaster double-time
           protein.
          Length = 440

 Score = 27.9 bits (59), Expect = 9.1
 Identities = 11/23 (47%), Positives = 15/23 (65%)
 Frame = -1

Query: 455 P*HTFLKKLFRNTYHYLDSCYDF 387
           P +  L+KLFRN +H L   YD+
Sbjct: 264 PDYCHLRKLFRNLFHRLGFTYDY 286


>AF055583-1|AAC39134.1|  440|Drosophila melanogaster casein kinase I
           homolog protein.
          Length = 440

 Score = 27.9 bits (59), Expect = 9.1
 Identities = 11/23 (47%), Positives = 15/23 (65%)
 Frame = -1

Query: 455 P*HTFLKKLFRNTYHYLDSCYDF 387
           P +  L+KLFRN +H L   YD+
Sbjct: 264 PDYCHLRKLFRNLFHRLGFTYDY 286


>AE014297-4701|AAF57109.1|  440|Drosophila melanogaster CG2048-PC,
           isoform C protein.
          Length = 440

 Score = 27.9 bits (59), Expect = 9.1
 Identities = 11/23 (47%), Positives = 15/23 (65%)
 Frame = -1

Query: 455 P*HTFLKKLFRNTYHYLDSCYDF 387
           P +  L+KLFRN +H L   YD+
Sbjct: 264 PDYCHLRKLFRNLFHRLGFTYDY 286


>AE014297-4700|AAF57108.1|  440|Drosophila melanogaster CG2048-PB,
           isoform B protein.
          Length = 440

 Score = 27.9 bits (59), Expect = 9.1
 Identities = 11/23 (47%), Positives = 15/23 (65%)
 Frame = -1

Query: 455 P*HTFLKKLFRNTYHYLDSCYDF 387
           P +  L+KLFRN +H L   YD+
Sbjct: 264 PDYCHLRKLFRNLFHRLGFTYDY 286


>AE014297-4699|AAF57110.1|  440|Drosophila melanogaster CG2048-PA,
           isoform A protein.
          Length = 440

 Score = 27.9 bits (59), Expect = 9.1
 Identities = 11/23 (47%), Positives = 15/23 (65%)
 Frame = -1

Query: 455 P*HTFLKKLFRNTYHYLDSCYDF 387
           P +  L+KLFRN +H L   YD+
Sbjct: 264 PDYCHLRKLFRNLFHRLGFTYDY 286


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,595,340
Number of Sequences: 53049
Number of extensions: 299591
Number of successful extensions: 774
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 765
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 771
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1991467008
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)