Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30152
         (723 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI0000611C2B Cluster: Tripartite motif-containing prot...    33   5.4  
UniRef50_Q8IJP6 Cluster: Putative uncharacterized protein; n=1; ...    33   9.4  
UniRef50_Q7QIN3 Cluster: ENSANGP00000021839; n=2; Culicidae|Rep:...    33   9.4  

>UniRef50_UPI0000611C2B Cluster: Tripartite motif-containing protein
           42.; n=2; Gallus gallus|Rep: Tripartite motif-containing
           protein 42. - Gallus gallus
          Length = 706

 Score = 33.5 bits (73), Expect = 5.4
 Identities = 12/41 (29%), Positives = 21/41 (51%)
 Frame = +2

Query: 53  RKIGTYLVACCSTNVCNRCIYLYSCDSGSLCHSMNPNVETD 175
           R++ T     C  N+C+ C++LY  +SG+  H      + D
Sbjct: 252 RRVATKRCRTCGINMCSECLHLYHTESGAQDHIFTNTCQED 292


>UniRef50_Q8IJP6 Cluster: Putative uncharacterized protein; n=1;
           Plasmodium falciparum 3D7|Rep: Putative uncharacterized
           protein - Plasmodium falciparum (isolate 3D7)
          Length = 2279

 Score = 32.7 bits (71), Expect = 9.4
 Identities = 19/63 (30%), Positives = 30/63 (47%)
 Frame = -2

Query: 203 NFKLDIRPANRSPHLDSWNDKENQNRMNINKYIDYKR*SNNTQPSRYRFFERNQTGLSRV 24
           N K+    +      DS NDKEN N  NINK  +    SNN +     + + +   +++V
Sbjct: 475 NMKIKENDSKNDSENDSKNDKENDNDFNINKRYN----SNNVKDMLDYYIKGSDNTINKV 530

Query: 23  TSY 15
            +Y
Sbjct: 531 LTY 533


>UniRef50_Q7QIN3 Cluster: ENSANGP00000021839; n=2; Culicidae|Rep:
           ENSANGP00000021839 - Anopheles gambiae str. PEST
          Length = 225

 Score = 32.7 bits (71), Expect = 9.4
 Identities = 13/22 (59%), Positives = 16/22 (72%)
 Frame = +2

Query: 65  TYLVACCSTNVCNRCIYLYSCD 130
           T +  CCSTNV NRC ++Y CD
Sbjct: 142 TNVECCCSTNVGNRCFFVY-CD 162


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 660,464,811
Number of Sequences: 1657284
Number of extensions: 12211506
Number of successful extensions: 30169
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 28387
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30107
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 58677691418
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)