Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30152
         (723 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggeri...    23   3.3  
AY321476-1|AAQ23386.1|  253|Tribolium castaneum Ash protein.           22   4.4  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    21   7.6  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    21   7.6  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    21   7.6  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    21   7.6  
AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory recept...    21   7.6  

>EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggering
           hormone receptorisoform A protein.
          Length = 434

 Score = 22.6 bits (46), Expect = 3.3
 Identities = 9/27 (33%), Positives = 14/27 (51%)
 Frame = -2

Query: 200 FKLDIRPANRSPHLDSWNDKENQNRMN 120
           + +  RP N S  + ++ND    NR N
Sbjct: 401 YNVCFRPRNNSILIKNFNDSPESNRSN 427


>AY321476-1|AAQ23386.1|  253|Tribolium castaneum Ash protein.
          Length = 253

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 14/42 (33%), Positives = 21/42 (50%)
 Frame = -3

Query: 349 QNGEIIKPWPP*DPKNSQ*KSPTPNSYTHSADMQLFKYVNTI 224
           Q+ +I+ P P     +S   SPTP+  + S+      Y NTI
Sbjct: 185 QSYQILLPTPTCSEASS---SPTPSHSSESSFSAASSYTNTI 223



 Score = 21.4 bits (43), Expect = 7.6
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = +3

Query: 681 QKNELLDLVFHWQ 719
           +  ELLD +F WQ
Sbjct: 238 EDEELLDAIFSWQ 250


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 6/14 (42%), Positives = 10/14 (71%)
 Frame = +1

Query: 43  WLRSKNRYLLGCVL 84
           WL+    +++GCVL
Sbjct: 786 WLQKATEHVIGCVL 799


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 6/14 (42%), Positives = 10/14 (71%)
 Frame = +1

Query: 43  WLRSKNRYLLGCVL 84
           WL+    +++GCVL
Sbjct: 786 WLQKATEHVIGCVL 799


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 6/14 (42%), Positives = 10/14 (71%)
 Frame = +1

Query: 43  WLRSKNRYLLGCVL 84
           WL+    +++GCVL
Sbjct: 786 WLQKATEHVIGCVL 799


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 6/14 (42%), Positives = 10/14 (71%)
 Frame = +1

Query: 43  WLRSKNRYLLGCVL 84
           WL+    +++GCVL
Sbjct: 786 WLQKATEHVIGCVL 799


>AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory receptor
           candidate 33 protein.
          Length = 321

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 8/23 (34%), Positives = 16/23 (69%)
 Frame = +1

Query: 577 LKFAKTMLTVCNLFIIFESTIIK 645
           ++ A+  +T  + FI+ +STI+K
Sbjct: 282 IRDAQVKITAADFFILDKSTILK 304


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 167,121
Number of Sequences: 336
Number of extensions: 3649
Number of successful extensions: 14
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19259425
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)