Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30152
         (723 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At5g36850.1 68418.m04415 hypothetical protein similar to At1g277...    29   3.1  
At1g34740.1 68414.m04319 Ulp1 protease family protein contains P...    29   3.1  
At1g27780.1 68414.m03399 Ulp1 protease family protein similar to...    29   3.1  
At1g57750.1 68414.m06552 cytochrome P450, putative similar to cy...    28   7.2  
At4g17140.1 68417.m02580 pleckstrin homology (PH) domain-contain...    27   9.5  
At2g05562.1 68415.m00589 hypothetical protein                          27   9.5  

>At5g36850.1 68418.m04415 hypothetical protein similar to At1g27780,
           At2g05560, At4g05280, At3g24385, At3g42590, At2g12110,
           At2g12100
          Length = 231

 Score = 29.1 bits (62), Expect = 3.1
 Identities = 12/20 (60%), Positives = 15/20 (75%)
 Frame = +2

Query: 68  YLVACCSTNVCNRCIYLYSC 127
           Y+V+    NVCNRC YL+SC
Sbjct: 205 YMVSGAFQNVCNRC-YLWSC 223


>At1g34740.1 68414.m04319 Ulp1 protease family protein contains Pfam
            profile PF02902: Ulp1 protease family, C-terminal
            catalytic domain; similar to At3g24380, At5g36840,
            At5g35010, At3g42740, At4g05290, At2g14770, At3g43390,
            At2g05560, At4g08880, At1g34730, At1g27790, At1g27780,
            At5g36850, At3g42730, At1g52020, At3g24390, At4g05280,
            At1g25886, At4g03300
          Length = 1383

 Score = 29.1 bits (62), Expect = 3.1
 Identities = 12/20 (60%), Positives = 15/20 (75%)
 Frame = +2

Query: 68   YLVACCSTNVCNRCIYLYSC 127
            Y+V+    NVCNRC YL+SC
Sbjct: 1357 YMVSGAFQNVCNRC-YLWSC 1375


>At1g27780.1 68414.m03399 Ulp1 protease family protein similar to
            At3g24380, At5g36840, At5g35010, At3g42740, At4g05290,
            At2g14770, At3g43390, At2g05560, At4g08880, At1g34730,
            At1g27790, At1g34740, At5g36850, At3g42730, At1g52020,
            At3g24390, At4g05280, At1g25886, At4g03300; contains Pfam
            profile PF02902: Ulp1 protease family, C-terminal
            catalytic domain
          Length = 1468

 Score = 29.1 bits (62), Expect = 3.1
 Identities = 12/20 (60%), Positives = 15/20 (75%)
 Frame = +2

Query: 68   YLVACCSTNVCNRCIYLYSC 127
            Y+V+    NVCNRC YL+SC
Sbjct: 1442 YMVSGAFQNVCNRC-YLWSC 1460


>At1g57750.1 68414.m06552 cytochrome P450, putative similar to
           cytochrome P450 GI:4688670 from [Catharanthus roseus]
          Length = 497

 Score = 27.9 bits (59), Expect = 7.2
 Identities = 11/24 (45%), Positives = 14/24 (58%)
 Frame = -3

Query: 391 LVCIGTIFIIQNLTQNGEIIKPWP 320
           LVC+ T F +Q   Q   I+K WP
Sbjct: 14  LVCLFTYFFLQKKPQGQPILKNWP 37


>At4g17140.1 68417.m02580 pleckstrin homology (PH) domain-containing
            protein contains Pfam profile PF00169: PH domain
          Length = 1322

 Score = 27.5 bits (58), Expect = 9.5
 Identities = 9/20 (45%), Positives = 14/20 (70%)
 Frame = +1

Query: 118  IFMRFWFSLSFHESKCGDRL 177
            + +R+W  +SFH S CG R+
Sbjct: 1148 LLLRYWLFVSFHFSLCGMRM 1167


>At2g05562.1 68415.m00589 hypothetical protein
          Length = 264

 Score = 27.5 bits (58), Expect = 9.5
 Identities = 12/20 (60%), Positives = 14/20 (70%)
 Frame = +2

Query: 68  YLVACCSTNVCNRCIYLYSC 127
           Y+V+    NVCNRC YL SC
Sbjct: 238 YMVSGAFQNVCNRC-YLSSC 256


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,249,317
Number of Sequences: 28952
Number of extensions: 265596
Number of successful extensions: 608
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 598
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 608
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1575119672
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)