Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30147
         (738 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q0VJV2 Cluster: Like moricin; n=3; Manduca sexta|Rep: L...    44   0.005
UniRef50_Q7UI44 Cluster: Type IV fimbrial assembly protein PilB;...    34   3.2  
UniRef50_Q89AQ0 Cluster: Peptidoglycan synthetase ftsI; n=1; Buc...    34   3.2  
UniRef50_O05699 Cluster: Glycosyl transferase; n=5; Rhizobium|Re...    33   5.5  

>UniRef50_Q0VJV2 Cluster: Like moricin; n=3; Manduca sexta|Rep: Like
           moricin - Manduca sexta (Tobacco hawkmoth) (Tobacco
           hornworm)
          Length = 248

 Score = 43.6 bits (98), Expect = 0.005
 Identities = 19/28 (67%), Positives = 22/28 (78%)
 Frame = -1

Query: 675 MGDGNNSPSGGPYARLPTRAIKKIYRVF 592
           MGDGN+SPSG PYA LPTRA  K+  +F
Sbjct: 1   MGDGNHSPSGRPYASLPTRAKMKLTSLF 28


>UniRef50_Q7UI44 Cluster: Type IV fimbrial assembly protein PilB;
           n=3; Planctomycetaceae|Rep: Type IV fimbrial assembly
           protein PilB - Rhodopirellula baltica
          Length = 701

 Score = 34.3 bits (75), Expect = 3.2
 Identities = 13/39 (33%), Positives = 23/39 (58%)
 Frame = -2

Query: 692 WDY*NPWVTVIIHHQVGRMLVCLQGQ*KKFIGCLRSRVR 576
           W   NP+ + ++ H+V R L C+ G+  +  GC R+ +R
Sbjct: 35  WSTPNPFCSSVVPHRVERNLTCIPGEVHRTTGCYRTLLR 73


>UniRef50_Q89AQ0 Cluster: Peptidoglycan synthetase ftsI; n=1;
           Buchnera aphidicola (Baizongia pistaciae)|Rep:
           Peptidoglycan synthetase ftsI - Buchnera aphidicola
           subsp. Baizongia pistaciae
          Length = 576

 Score = 34.3 bits (75), Expect = 3.2
 Identities = 29/138 (21%), Positives = 56/138 (40%), Gaps = 2/138 (1%)
 Frame = -1

Query: 474 NTIYLITCYNVAFRII*NYSVTSNVPSHRD*VHPYLRDYLKSLHFSTIYISPRFKAFFIT 295
           +T+  I    + +RI   YS  ++       V+P + +Y+  LH   IYI   FK F+  
Sbjct: 113 STVLSIPLSEIFYRI--KYSKNNHFIYLAHKVNPEISEYISQLHIPGIYILDDFKRFYPF 170

Query: 294 FHSALQEISF-QLPN-AMTSIQLRFKKVVQTXXXXXXXXXXFHLEVPELIVTANNHMRHT 121
                Q I F  + N  +  ++  F K++             +  + E     N    H 
Sbjct: 171 GKLTSQLIGFTNIDNEGIEGVEKSFNKLLMGKPGKKQIITDRYGRIIEQHNLVNKIQSHD 230

Query: 120 VLLAYKYRFKSLLYGLIS 67
           ++L+    F+  +Y +++
Sbjct: 231 IILSIDCSFQKFIYHILN 248


>UniRef50_O05699 Cluster: Glycosyl transferase; n=5; Rhizobium|Rep:
           Glycosyl transferase - Rhizobium leguminosarum
          Length = 294

 Score = 33.5 bits (73), Expect = 5.5
 Identities = 13/30 (43%), Positives = 20/30 (66%)
 Frame = -1

Query: 726 QKLVGSGLAQTLGLLKSMGDGNNSPSGGPY 637
           + LV  G+A+T  LLK  G+  N+ +GGP+
Sbjct: 239 KSLVAGGIAETTSLLKLRGEARNTVAGGPF 268


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 683,478,177
Number of Sequences: 1657284
Number of extensions: 13561371
Number of successful extensions: 27942
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 27111
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27914
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 60088620670
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)