Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30147
         (738 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.               23   3.0  
AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamat...    23   4.0  
AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamat...    23   4.0  
AY268030-1|AAP23055.1|  602|Apis mellifera dorsal protein protein.     22   6.9  
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat...    21   9.1  

>DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.
          Length = 828

 Score = 23.0 bits (47), Expect = 3.0
 Identities = 9/24 (37%), Positives = 14/24 (58%)
 Frame = -2

Query: 443 WLLELFEIIP*HLMYHRIETEFIP 372
           W+ E  E+IP H+M   ++  F P
Sbjct: 629 WVYEWKELIPSHIMAGLLDKFFFP 652


>AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamate
           receptor 1 protein.
          Length = 843

 Score = 22.6 bits (46), Expect = 4.0
 Identities = 9/16 (56%), Positives = 10/16 (62%)
 Frame = +2

Query: 119 TVCLIWLLAVTISSGT 166
           T C+IWL  V I  GT
Sbjct: 714 TTCIIWLAFVPIYFGT 729


>AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 933

 Score = 22.6 bits (46), Expect = 4.0
 Identities = 9/16 (56%), Positives = 10/16 (62%)
 Frame = +2

Query: 119 TVCLIWLLAVTISSGT 166
           T C+IWL  V I  GT
Sbjct: 804 TTCIIWLAFVPIYFGT 819


>AY268030-1|AAP23055.1|  602|Apis mellifera dorsal protein protein.
          Length = 602

 Score = 21.8 bits (44), Expect = 6.9
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = +3

Query: 579 DSGPQTPYKFFLLPL*ADE 635
           D     P+ F +LPL AD+
Sbjct: 311 DGATSEPFPFLMLPLGADD 329


>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 1040

 Score = 21.4 bits (43), Expect = 9.1
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = +2

Query: 119 TVCLIWLLAVTISSGT 166
           T C+IWL  V +  GT
Sbjct: 856 TTCVIWLAFVPLYFGT 871


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 196,939
Number of Sequences: 438
Number of extensions: 4246
Number of successful extensions: 14
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23023035
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)