Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30147
         (738 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At3g20460.1 68416.m02590 sugar transporter, putative similar to ...    29   3.2  
At5g27350.1 68418.m03266 sugar-porter family protein 1 (SFP1) id...    27   9.8  
At1g67140.1 68414.m07638 expressed protein                             27   9.8  

>At3g20460.1 68416.m02590 sugar transporter, putative similar to
           ERD6 protein [Arabidopsis thaliana] GI:3123712,
           sugar-porter family proteins 1 and 2 [Arabidopsis
           thaliana] GI:14585699, GI:14585701; contains Pfam
           profile PF00083: major facilitator superfamily protein
          Length = 488

 Score = 29.1 bits (62), Expect = 3.2
 Identities = 16/37 (43%), Positives = 21/37 (56%)
 Frame = -3

Query: 127 THGLACLQIQIQVPTLRSYISYLSTSFKAAGFSKTVG 17
           T G+  L +Q Q+  L  Y  YLS+ FK +GF   VG
Sbjct: 290 TVGIGLLVLQ-QLGGLSGYTFYLSSIFKKSGFPNNVG 325


>At5g27350.1 68418.m03266 sugar-porter family protein 1 (SFP1)
           identical to sugar-porter family protein 1 [Arabidopsis
           thaliana] GI:14585699
          Length = 474

 Score = 27.5 bits (58), Expect = 9.8
 Identities = 15/35 (42%), Positives = 20/35 (57%)
 Frame = -3

Query: 121 GLACLQIQIQVPTLRSYISYLSTSFKAAGFSKTVG 17
           G+  + IQ Q     + ISY ST F+ AGFS  +G
Sbjct: 270 GIGLMLIQ-QFSGSAAVISYASTIFRKAGFSVAIG 303


>At1g67140.1 68414.m07638 expressed protein
          Length = 2158

 Score = 27.5 bits (58), Expect = 9.8
 Identities = 12/37 (32%), Positives = 22/37 (59%)
 Frame = -1

Query: 168  EVPELIVTANNHMRHTVLLAYKYRFKSLLYGLISLIY 58
            E+P L+   N  +  T++L + Y + + LY + SLI+
Sbjct: 899  EIPTLLEYVNAFLFATIILIHCYYYMNYLYPVSSLIF 935


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,767,004
Number of Sequences: 28952
Number of extensions: 298993
Number of successful extensions: 610
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 598
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 610
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1624036432
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)