Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV30146
(752 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_7564| Best HMM Match : Peptidase_M1 (HMM E-Value=6.8e-08) 139 3e-33
SB_9412| Best HMM Match : Peptidase_M1 (HMM E-Value=3.1e-07) 46 3e-05
SB_9130| Best HMM Match : Peptidase_M1 (HMM E-Value=0) 42 7e-04
SB_5727| Best HMM Match : Peptidase_M1 (HMM E-Value=0) 34 0.14
SB_51392| Best HMM Match : Peptidase_M1 (HMM E-Value=0) 33 0.19
SB_45004| Best HMM Match : Peptidase_M1 (HMM E-Value=0.0054) 32 0.57
SB_11560| Best HMM Match : Peptidase_M1 (HMM E-Value=0) 30 1.8
SB_54097| Best HMM Match : SERTA (HMM E-Value=4.1) 30 2.3
SB_15203| Best HMM Match : SERTA (HMM E-Value=4.1) 30 2.3
SB_3438| Best HMM Match : RVT_1 (HMM E-Value=1.3e-30) 30 2.3
SB_13021| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.1
SB_52174| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.4
SB_11383| Best HMM Match : rve (HMM E-Value=2.3e-18) 29 5.4
SB_42349| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.1
SB_49583| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.1
SB_18732| Best HMM Match : RVT_1 (HMM E-Value=2.2e-13) 28 7.1
SB_37892| Best HMM Match : rve (HMM E-Value=2.1e-16) 28 9.4
SB_26930| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.4
SB_3385| Best HMM Match : 3_5_exonuc (HMM E-Value=0.0015) 28 9.4
SB_14689| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.4
SB_8223| Best HMM Match : RVT_1 (HMM E-Value=4e-27) 28 9.4
SB_6571| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.4
>SB_7564| Best HMM Match : Peptidase_M1 (HMM E-Value=6.8e-08)
Length = 457
Score = 139 bits (336), Expect = 3e-33
Identities = 66/124 (53%), Positives = 85/124 (68%), Gaps = 2/124 (1%)
Frame = +1
Query: 325 VLDSSELTIESIEL--DGAQLTYKLDDPVPNYGSKLTIQLPKRASSGDKLKIKIKYTTSP 498
VLD+ +L ++S+ + QLT+ L +G+ L I LP SG +L I I Y TSP
Sbjct: 1 VLDTRDLNVQSVAVRPSNDQLTFSLGSKHKAFGTPLEISLPPGLKSGARLSIAISYRTSP 60
Query: 499 SATALQWLQPAQTSGKKHPYLFSQCQPIHARSILPCQDTPFVKFTYDAEVTAPEEFTVLM 678
A+ALQWL P QTSGKKHPY+F+QCQ IHARSI+PCQD+P VK TY A+V+ P++ LM
Sbjct: 61 DASALQWLTPEQTSGKKHPYMFTQCQAIHARSIIPCQDSPGVKATYSAKVSVPKDLVALM 120
Query: 679 SALR 690
SA R
Sbjct: 121 SAAR 124
>SB_9412| Best HMM Match : Peptidase_M1 (HMM E-Value=3.1e-07)
Length = 1844
Score = 46.0 bits (104), Expect = 3e-05
Identities = 25/70 (35%), Positives = 34/70 (48%)
Frame = +1
Query: 472 IKIKYTTSPSATALQWLQPAQTSGKKHPYLFSQCQPIHARSILPCQDTPFVKFTYDAEVT 651
+ IKY TSP +L W T P +FS I+ RS++PCQ+ P T+ A +
Sbjct: 1353 VVIKYHTSPEGQSLSWA----TDQDGRPCVFSPGAYINNRSLMPCQEPPIAMSTWQAAIH 1408
Query: 652 APEEFTVLMS 681
P LMS
Sbjct: 1409 VPHGCMALMS 1418
Score = 37.1 bits (82), Expect = 0.015
Identities = 23/74 (31%), Positives = 40/74 (54%), Gaps = 5/74 (6%)
Frame = +1
Query: 211 EQAVIKHVTLSLNVDFENKVLNGSATLDVD-----VLQDIGDVVLDSSELTIESIELDGA 375
++ ++KH L L VDF+ KVL GS L ++ Q+ + LDS+ + +ES+ +
Sbjct: 1030 DEVLVKHYILDLTVDFDEKVLRGSIVLFLEPTHEKATQNTFQLCLDSTLVNVESV----S 1085
Query: 376 QLTYKLDDPVPNYG 417
++ D +P YG
Sbjct: 1086 EVFLPDDFKIPFYG 1099
>SB_9130| Best HMM Match : Peptidase_M1 (HMM E-Value=0)
Length = 890
Score = 41.5 bits (93), Expect = 7e-04
Identities = 28/153 (18%), Positives = 68/153 (44%), Gaps = 4/153 (2%)
Frame = +1
Query: 229 HVTLSLNVDFENKVLNGSATLDVDVLQDIGDVVLDSSELTIESIEL--DGAQLTYKLDDP 402
H L LNV + +G + ++V + +++ + L + I++ G+Q + +
Sbjct: 113 HYNLFLNVTLDRDHFHGKVDIYINVFKATKIIIVHNRRLNVSDIDIRKTGSQGSLGIRQH 172
Query: 403 VPNYGSKLTIQLPKRASSGDKLKIKIKYTTSPSATALQWLQPA--QTSGKKHPYLFSQCQ 576
P ++ + +++ + I Y S + + + Q +G++ ++ +Q +
Sbjct: 173 FPFKKNQFYVMEAEQSLEPSLYVVSISYKGFYSKGLRGFYRSSFTQNNGQRVYFVATQFE 232
Query: 577 PIHARSILPCQDTPFVKFTYDAEVTAPEEFTVL 675
P+ AR PC D P +K T++ + ++ L
Sbjct: 233 PVKAREAFPCFDEPGMKATFNITIAHRPDYVAL 265
>SB_5727| Best HMM Match : Peptidase_M1 (HMM E-Value=0)
Length = 904
Score = 33.9 bits (74), Expect = 0.14
Identities = 33/171 (19%), Positives = 68/171 (39%), Gaps = 5/171 (2%)
Frame = +1
Query: 208 PEQAVIKHVTLSLNVDFENKVLNGSATLDVDVLQDIGDVVLDSSELTIESIE-LDGAQLT 384
P+ V H + LN+ + G++ + ++V Q +++ S+ + + S ++ A
Sbjct: 242 PKNVVPVHYNVYLNIILKELRFTGTSEIHLNVTQSTDLILVHSARMNVTSGSVMNKAGDQ 301
Query: 385 YKLDDPVPNYGSKLTIQLPKRASSGDKLKIKIKYTT--SPSATALQWLQPAQTSGKKHPY 558
+ ++ T+ + A + + + S L Q GK
Sbjct: 302 QAIKKRFWFEKNQFTVLQMETALEPGPYVVMLGFEAFLSDQLNGLYRSQYTHKDGKNVTI 361
Query: 559 LFSQCQPIHARSILPCQDTPFVKFTYDAEVTAPEEFTVL--MSALRGESRS 705
+Q QP AR PC D P +K T++ + +F + M + E+R+
Sbjct: 362 ATTQFQPTDARKAFPCLDEPALKATFNITIEHRPDFIAISNMPIWKNETRN 412
>SB_51392| Best HMM Match : Peptidase_M1 (HMM E-Value=0)
Length = 791
Score = 33.5 bits (73), Expect = 0.19
Identities = 12/36 (33%), Positives = 23/36 (63%)
Frame = +1
Query: 556 YLFSQCQPIHARSILPCQDTPFVKFTYDAEVTAPEE 663
++ +Q +P +AR+ PC D P +K T++ +T P +
Sbjct: 131 FVATQFEPHYARTAFPCFDEPALKATFNTTITHPSD 166
>SB_45004| Best HMM Match : Peptidase_M1 (HMM E-Value=0.0054)
Length = 236
Score = 31.9 bits (69), Expect = 0.57
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = +1
Query: 556 YLFSQCQPIHARSILPCQDTPFVKFTYDAEVT 651
Y+ SQ P ARS+ PC D P K T++ ++
Sbjct: 70 YVASQFGPAEARSVFPCFDEPAFKATFNLTIS 101
>SB_11560| Best HMM Match : Peptidase_M1 (HMM E-Value=0)
Length = 854
Score = 30.3 bits (65), Expect = 1.8
Identities = 12/34 (35%), Positives = 18/34 (52%)
Frame = +1
Query: 574 QPIHARSILPCQDTPFVKFTYDAEVTAPEEFTVL 675
+P AR LPC D P +K T+ + ++T L
Sbjct: 250 EPTDARKALPCFDEPAMKATFTTTIVHEPDYTAL 283
>SB_54097| Best HMM Match : SERTA (HMM E-Value=4.1)
Length = 195
Score = 29.9 bits (64), Expect = 2.3
Identities = 19/53 (35%), Positives = 29/53 (54%)
Frame = +1
Query: 187 DPSSFSRPEQAVIKHVTLSLNVDFENKVLNGSATLDVDVLQDIGDVVLDSSEL 345
DPSS +IK++ +N FEN VLN D + D+G++ ++S EL
Sbjct: 143 DPSSSDLRHDVIIKNIEQIINEYFEN-VLN---MPDAEPDTDLGELYMESKEL 191
>SB_15203| Best HMM Match : SERTA (HMM E-Value=4.1)
Length = 109
Score = 29.9 bits (64), Expect = 2.3
Identities = 19/53 (35%), Positives = 29/53 (54%)
Frame = +1
Query: 187 DPSSFSRPEQAVIKHVTLSLNVDFENKVLNGSATLDVDVLQDIGDVVLDSSEL 345
DPSS +IK++ +N FEN VLN D + D+G++ ++S EL
Sbjct: 57 DPSSSDLRHDVIIKNIEQIINEYFEN-VLN---MPDAEPDTDLGELYMESKEL 105
>SB_3438| Best HMM Match : RVT_1 (HMM E-Value=1.3e-30)
Length = 1405
Score = 29.9 bits (64), Expect = 2.3
Identities = 22/64 (34%), Positives = 31/64 (48%), Gaps = 2/64 (3%)
Frame = +1
Query: 211 EQAVIKHVTLSLNVDF--ENKVLNGSATLDVDVLQDIGDVVLDSSELTIESIELDGAQLT 384
E+ + +T +LN F V+ A + V Q GDV S E IE+DG +T
Sbjct: 81 EKTTFEEMTTALNTYFGARKNVIVDRARFNRRV-QKPGDVSKSSVEYWKAEIEVDGQPIT 139
Query: 385 YKLD 396
+KLD
Sbjct: 140 FKLD 143
>SB_13021| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 964
Score = 29.1 bits (62), Expect = 4.1
Identities = 24/90 (26%), Positives = 37/90 (41%)
Frame = +1
Query: 349 IESIELDGAQLTYKLDDPVPNYGSKLTIQLPKRASSGDKLKIKIKYTTSPSATALQWLQP 528
+E+I L+ T D+P Y ++ + R DK IKI PS+ P
Sbjct: 315 VENINLEYKNST-DADEPYWEYELEIEVDDAGRKHL-DKYDIKITVPRPPSSPPPSGAHP 372
Query: 529 AQTSGKKHPYLFSQCQPIHARSILPCQDTP 618
++ S + + + RSILP TP
Sbjct: 373 SRPSSHREVISIEAMRTLKPRSILPDGRTP 402
>SB_52174| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 685
Score = 28.7 bits (61), Expect = 5.4
Identities = 19/53 (35%), Positives = 28/53 (52%)
Frame = +1
Query: 187 DPSSFSRPEQAVIKHVTLSLNVDFENKVLNGSATLDVDVLQDIGDVVLDSSEL 345
DPSS +IK++ +N FEN VLN D + D+G + ++S EL
Sbjct: 633 DPSSSDLRHDVIIKNIKQIINEYFEN-VLN---MRDAEPDTDLGALYMESKEL 681
>SB_11383| Best HMM Match : rve (HMM E-Value=2.3e-18)
Length = 1003
Score = 28.7 bits (61), Expect = 5.4
Identities = 35/111 (31%), Positives = 51/111 (45%), Gaps = 10/111 (9%)
Frame = +1
Query: 103 SLINFGLHTKQTRSRFSQV--PVMG--AFSPLDPSSFSR-PEQAVIKHVTLS-LNVDFE- 261
++I + L+ T +V P+ G A P+ P R P Q + + L L VD E
Sbjct: 70 TVIPYNLYKSITNKPLKRVHQPLKGWLATKPIYPKGCVRLPTQYKDRKIDLLYLVVDGEF 129
Query: 262 NKVLNGSATLDVDVLQDIGDVVLDSSELTIESIELDGAQ---LTYKLDDPV 405
+L+ A LD++VLQ + +LDS +IEL Q T DPV
Sbjct: 130 TPLLSCEACLDLEVLQFMDLTLLDSPSAQTSNIELSREQSKSTTTLTSDPV 180
>SB_42349| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 980
Score = 28.3 bits (60), Expect = 7.1
Identities = 11/31 (35%), Positives = 20/31 (64%)
Frame = +3
Query: 516 MVTASSNFGEETSLSIQSVSADSCQIYSSVS 608
+VT++ NFGE T ++ + +SC+ +VS
Sbjct: 599 VVTSNGNFGETTIRDVRGCAVESCREIETVS 629
>SB_49583| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 163
Score = 28.3 bits (60), Expect = 7.1
Identities = 18/51 (35%), Positives = 26/51 (50%), Gaps = 2/51 (3%)
Frame = -1
Query: 245 NDKVTCFITACSGREKEDGSRGLKAPMTGT*LKRDLVCFVCKPK--FIREC 99
+DK C+ +C +K SR K P +G RD+VC+ C F R+C
Sbjct: 23 DDKPVCY--SCG--KKGHISRDCKNPSSGGSRNRDVVCYRCNMSGHFARDC 69
>SB_18732| Best HMM Match : RVT_1 (HMM E-Value=2.2e-13)
Length = 1582
Score = 28.3 bits (60), Expect = 7.1
Identities = 17/37 (45%), Positives = 21/37 (56%)
Frame = +1
Query: 493 SPSATALQWLQPAQTSGKKHPYLFSQCQPIHARSILP 603
SPSA + WL +G+KH L + PIH RSI P
Sbjct: 655 SPSAV-MGWL-----TGQKHRNLSKEISPIHVRSINP 685
>SB_37892| Best HMM Match : rve (HMM E-Value=2.1e-16)
Length = 824
Score = 27.9 bits (59), Expect = 9.4
Identities = 21/63 (33%), Positives = 31/63 (49%), Gaps = 2/63 (3%)
Frame = +1
Query: 214 QAVIKHVTLSLNVDF--ENKVLNGSATLDVDVLQDIGDVVLDSSELTIESIELDGAQLTY 387
+A + +T +LN F V+ A + V Q G+V S E IE+DG +T+
Sbjct: 82 KATFEEMTTALNTYFGARKNVIVDRARFNRRV-QKPGEVSKSSVEYWKAEIEVDGQPITF 140
Query: 388 KLD 396
KLD
Sbjct: 141 KLD 143
>SB_26930| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1533
Score = 27.9 bits (59), Expect = 9.4
Identities = 23/92 (25%), Positives = 33/92 (35%)
Frame = +1
Query: 463 KLKIKIKYTTSPSATALQWLQPAQTSGKKHPYLFSQCQPIHARSILPCQDTPFVKFTYDA 642
K+ + + T+P A Q S H YL ++ +P P D V A
Sbjct: 519 KIHLNYDFATAPEHMAALPSSAIQLSQDDHQYLVAEKRP-DCLDATPATDLARVDACLPA 577
Query: 643 EVTAPEEFTVLMSALRGESRSTKRPSISRCLC 738
+ P V SA GE R + P + C
Sbjct: 578 -IAVPNPVFVPKSASFGEERQGENPDLKHHEC 608
>SB_3385| Best HMM Match : 3_5_exonuc (HMM E-Value=0.0015)
Length = 437
Score = 27.9 bits (59), Expect = 9.4
Identities = 19/50 (38%), Positives = 28/50 (56%), Gaps = 4/50 (8%)
Frame = +1
Query: 196 SFSRPEQAVIKHVTLSLNVDFENKVLNGSATLD----VDVLQDIGDVVLD 333
SF + E ++ T + DFE+ V +GSA++D + VL D DV LD
Sbjct: 133 SFEKIEAVSVETRTENNLSDFESTVGDGSASVDHIPNIGVLDDYPDVPLD 182
>SB_14689| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1900
Score = 27.9 bits (59), Expect = 9.4
Identities = 14/36 (38%), Positives = 22/36 (61%)
Frame = +3
Query: 555 LSIQSVSADSCQIYSSVSRHSICKVHL*CRSHGARG 662
LS +S++ S + +S HS+C+V L +HG RG
Sbjct: 433 LSTKSMATFSRKRFSGTELHSLCRVAL-SNTHGIRG 467
>SB_8223| Best HMM Match : RVT_1 (HMM E-Value=4e-27)
Length = 1307
Score = 27.9 bits (59), Expect = 9.4
Identities = 14/36 (38%), Positives = 22/36 (61%)
Frame = +3
Query: 555 LSIQSVSADSCQIYSSVSRHSICKVHL*CRSHGARG 662
LS +S++ S + +S HS+C+V L +HG RG
Sbjct: 1147 LSTKSMATFSRKRFSGTELHSLCRVAL-SNTHGIRG 1181
>SB_6571| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 182
Score = 27.9 bits (59), Expect = 9.4
Identities = 9/19 (47%), Positives = 12/19 (63%)
Frame = +1
Query: 547 KHPYLFSQCQPIHARSILP 603
KH +LFS C P H + +P
Sbjct: 14 KHQHLFSSCHPHHTKKAIP 32
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,567,664
Number of Sequences: 59808
Number of extensions: 399290
Number of successful extensions: 1000
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 941
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 999
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 2046258890
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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