Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30145
         (700 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggeri...    24   1.0  
AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    21   7.3  

>EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggering
           hormone receptorisoform A protein.
          Length = 434

 Score = 24.2 bits (50), Expect = 1.0
 Identities = 15/72 (20%), Positives = 33/72 (45%)
 Frame = +1

Query: 64  ENVSVQXXXXXXXXXXXYYVGYMCFVLKKKVVILWILINRT*VIYFVFTLRYFLSFHFSF 243
           +N+S++             + +   ++  +V ILWI++     +Y +   +Y+   +F  
Sbjct: 278 DNISLRARKQVVLMLGTVVLSFFLCLIPFRVFILWIILVPEEQVYHLEIEKYYNILYFC- 336

Query: 244 DRRKKIFLNSQI 279
             R  ++LNS I
Sbjct: 337 --RIMVYLNSAI 346


>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 8/22 (36%), Positives = 16/22 (72%)
 Frame = +2

Query: 521 FGLLVFILVELLSS*CSTATMN 586
           +G+LV I+  L+++  +T T+N
Sbjct: 379 WGILVLIIAPLIATLIATVTVN 400


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 139,842
Number of Sequences: 336
Number of extensions: 2620
Number of successful extensions: 2
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18426585
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)