Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV30144
(650 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At2g36560.1 68415.m04484 DNA-binding protein-related contains Pf... 34 0.071
At2g45000.1 68415.m05603 expressed protein contains Pfam profile... 32 0.38
At1g67230.1 68414.m07652 expressed protein 32 0.38
At1g28210.2 68414.m03463 DNAJ heat shock protein, putative stron... 31 0.50
At1g28210.1 68414.m03462 DNAJ heat shock protein, putative stron... 31 0.50
At2g23480.1 68415.m02803 hypothetical protein contains Pfam prof... 31 0.88
At2g03000.1 68415.m00252 zinc finger (C3HC4-type RING finger) fa... 30 1.2
At3g60900.1 68416.m06813 fasciclin-like arabinogalactan-protein ... 29 3.5
At3g24880.1 68416.m03120 expressed protein 29 3.5
At3g24870.1 68416.m03119 expressed protein 29 3.5
At3g07200.1 68416.m00859 zinc finger (C3HC4-type RING finger) fa... 29 3.5
At1g47200.1 68414.m05223 MFP1 attachment factor, putative contai... 29 3.5
At1g72150.1 68414.m08342 SEC14 cytosolic factor family protein /... 28 4.7
At1g62700.1 68414.m07077 no apical meristem (NAM) family protein... 25 5.5
At5g55090.1 68418.m06867 protein kinase family protein contains ... 27 8.2
At3g49800.1 68416.m05445 BSD domain-containing protein contains ... 27 8.2
At1g27850.1 68414.m03413 expressed protein similar to En/Spm-lik... 27 8.2
>At2g36560.1 68415.m04484 DNA-binding protein-related contains Pfam
domain PF03479: Domain of unknown function (DUF296),
found in AT-hook motifs Pfam:PF02178
Length = 574
Score = 34.3 bits (75), Expect = 0.071
Identities = 16/54 (29%), Positives = 30/54 (55%)
Frame = -2
Query: 325 TTGPLLDISTVAPATLVDELVSVSTVAVLPSAVTETSAATDLTFLEGVTSSFQR 164
T P+ + APAT+V+ + ++ + P VT+T+ A T +EGV + ++
Sbjct: 9 TPFPVTKTAVAAPATVVEGVNDANSTPISPFPVTKTAEAAPATVVEGVNDASRK 62
>At2g45000.1 68415.m05603 expressed protein contains Pfam profile:
PF05064 Nsp1-like C-terminal region
Length = 739
Score = 31.9 bits (69), Expect = 0.38
Identities = 37/145 (25%), Positives = 57/145 (39%), Gaps = 5/145 (3%)
Frame = -2
Query: 649 TDTSSLITSVALTPVGDSITSFTTTAGAATIVLGPLETSFTAGVTSSLMVPLGSSLISLP 470
+ TS + S+A T S T T+A A++ + + GVTSS +S +
Sbjct: 386 SSTSGAVFSIATTTTTSSSTPAATSAPASSAPASTMAFP-SFGVTSSATNTTPASSAATF 444
Query: 469 STVGSSDRIVTIADEDEVSAETYSLPSEGEASFA-----TTAVVEIAASVIKSTTGPLLD 305
ST G T A S +++P + + T+ + STT P
Sbjct: 445 STTGFGLASSTPATGSTNSFTGFAVPKTSTPASSSQPQTTSPAFSFSLPSSTSTTAPATS 504
Query: 304 ISTVAPATLVDELVSVSTVAVLPSA 230
+T TLV S ++ AV P A
Sbjct: 505 SATTTQTTLVVPSSSGTSTAVAPVA 529
>At1g67230.1 68414.m07652 expressed protein
Length = 1132
Score = 31.9 bits (69), Expect = 0.38
Identities = 26/75 (34%), Positives = 32/75 (42%), Gaps = 2/75 (2%)
Frame = +3
Query: 417 TSSSSAIVTIRSDEPTVDGKLINEEPKGTINDEVTPAVNEVSSGPSTIVAAPAVVVNDV- 593
TS + I+ EP+V L ++EP+ T V GPST V A DV
Sbjct: 796 TSKMLKLSPIKMTEPSVTWNLADQEPQSTEQANV--------GGPSTTVQAATTYSFDVQ 847
Query: 594 -IESPTGVSATEVIN 635
ES TG EV N
Sbjct: 848 KAESETGTKEVEVTN 862
>At1g28210.2 68414.m03463 DNAJ heat shock protein, putative strong
similarity to mitochondrial DnaJ protein (AtJ1)
GI:564030 from [Arabidopsis thaliana]; contains Pfam
profiles PF00226: DnaJ domain, PF01556: DnaJ C terminal
region, PF00684: DnaJ central domain (4 repeats);
identical to cDNA DnaJ homolog AtJ1 (atj) GI:564029
Length = 427
Score = 31.5 bits (68), Expect = 0.50
Identities = 20/53 (37%), Positives = 33/53 (62%), Gaps = 2/53 (3%)
Frame = +3
Query: 366 VAKDAS-PSEGSE-YVSADTSSSSAIVTIRSDEPTVDGKLINEEPKGTINDEV 518
VA D++ +GS+ YV A+ S + AI+ + PT+ GK+ + PKGT D++
Sbjct: 288 VANDSTFTRDGSDIYVDANISFTQAILGGKVVVPTLSGKIQLDIPKGTQPDQL 340
>At1g28210.1 68414.m03462 DNAJ heat shock protein, putative strong
similarity to mitochondrial DnaJ protein (AtJ1)
GI:564030 from [Arabidopsis thaliana]; contains Pfam
profiles PF00226: DnaJ domain, PF01556: DnaJ C terminal
region, PF00684: DnaJ central domain (4 repeats);
identical to cDNA DnaJ homolog AtJ1 (atj) GI:564029
Length = 408
Score = 31.5 bits (68), Expect = 0.50
Identities = 20/53 (37%), Positives = 33/53 (62%), Gaps = 2/53 (3%)
Frame = +3
Query: 366 VAKDAS-PSEGSE-YVSADTSSSSAIVTIRSDEPTVDGKLINEEPKGTINDEV 518
VA D++ +GS+ YV A+ S + AI+ + PT+ GK+ + PKGT D++
Sbjct: 288 VANDSTFTRDGSDIYVDANISFTQAILGGKVVVPTLSGKIQLDIPKGTQPDQL 340
>At2g23480.1 68415.m02803 hypothetical protein contains Pfam profile
PF03384: Drosophila protein of unknown function, DUF287
Length = 705
Score = 30.7 bits (66), Expect = 0.88
Identities = 22/103 (21%), Positives = 47/103 (45%), Gaps = 3/103 (2%)
Frame = -2
Query: 502 VPLGSSLISLPSTVGSSDRIVTIADEDEVSAETYSLPSEGEASFATTAVVEIAASVIKST 323
VP + + P+ +++ A +++V A ++ +A+ TTA + A+ + +T
Sbjct: 38 VPAKKAKVQAPA---KKEKVQAPAKKEKVQAPAKK--AKVQATAKTTATAQTTATAMATT 92
Query: 322 TGPLLDISTVAPAT---LVDELVSVSTVAVLPSAVTETSAATD 203
P T AP T ++D+ + +P+ T+ + TD
Sbjct: 93 AAPTTTAPTTAPTTESPMLDDSTFYDALKHIPAEETQENMQTD 135
>At2g03000.1 68415.m00252 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 535
Score = 30.3 bits (65), Expect = 1.2
Identities = 24/89 (26%), Positives = 42/89 (47%)
Frame = -2
Query: 418 VSAETYSLPSEGEASFATTAVVEIAASVIKSTTGPLLDISTVAPATLVDELVSVSTVAVL 239
V T ++PS + T++ + S+T + S +AP T+ S+STV ++
Sbjct: 298 VPTSTTNVPSSNSSRVLQTSMSTRGTFPMSSSTRMSVQASMLAPGTVSS---SMSTVEIM 354
Query: 238 PSAVTETSAATDLTFLEGVTSSFQRLTVL 152
P TSA +T E V +SF + + +
Sbjct: 355 P-----TSARNMITMSEEVANSFTQTSYI 378
>At3g60900.1 68416.m06813 fasciclin-like arabinogalactan-protein
(FLA10)
Length = 422
Score = 28.7 bits (61), Expect = 3.5
Identities = 23/92 (25%), Positives = 39/92 (42%), Gaps = 5/92 (5%)
Frame = +3
Query: 318 PVVDLITDAAISTTAVVAKDASPSEGSEYVSADT-SSSSAIVTIRSDEPTVDG----KLI 482
PVV D + + K +SP+ E VSA T + + + + + PT +
Sbjct: 317 PVVIFTVDNVLLPAELFGKSSSPAPAPEPVSAPTPTPAKSPSPVEAPSPTAASPPAPPVD 376
Query: 483 NEEPKGTINDEVTPAVNEVSSGPSTIVAAPAV 578
P+G +D T + N + + V APA+
Sbjct: 377 ESSPEGAPSDSPTSSENSNAKNAAFHVNAPAL 408
>At3g24880.1 68416.m03120 expressed protein
Length = 1957
Score = 28.7 bits (61), Expect = 3.5
Identities = 25/102 (24%), Positives = 44/102 (43%), Gaps = 2/102 (1%)
Frame = -2
Query: 586 FTTTAGAATIVLGPLETSFTAGVTS--SLMVPLGSSLISLPSTVGSSDRIVTIADEDEVS 413
++ +GA + L +E+ T S S+ + +S +G + VT DEDE
Sbjct: 728 YSVPSGAMEVYLKSIESHLTRCEKSGSSMQEEVDTSAYDTAGDIGYN---VTAFDEDEGE 784
Query: 412 AETYSLPSEGEASFATTAVVEIAASVIKSTTGPLLDISTVAP 287
TY LP E+S + + +++KS + D+ P
Sbjct: 785 TSTYYLPGAFESSRSFNISHKKRKNLMKSHSARSYDLGDDLP 826
>At3g24870.1 68416.m03119 expressed protein
Length = 1841
Score = 28.7 bits (61), Expect = 3.5
Identities = 25/102 (24%), Positives = 44/102 (43%), Gaps = 2/102 (1%)
Frame = -2
Query: 586 FTTTAGAATIVLGPLETSFTAGVTS--SLMVPLGSSLISLPSTVGSSDRIVTIADEDEVS 413
++ +GA + L +E+ T S S+ + +S +G + VT DEDE
Sbjct: 723 YSVPSGAMEVYLKSIESHLTRCEKSGSSMQEEVDTSAYDTAGDIGYN---VTAFDEDEGE 779
Query: 412 AETYSLPSEGEASFATTAVVEIAASVIKSTTGPLLDISTVAP 287
TY LP E+S + + +++KS + D+ P
Sbjct: 780 TSTYYLPGAFESSRSFNISHKKRKNLMKSHSARSYDLGDDLP 821
>At3g07200.1 68416.m00859 zinc finger (C3HC4-type RING finger)
family protein contains Pfam PF00097: Zinc finger, C3HC4
type (RING finger)
Length = 182
Score = 28.7 bits (61), Expect = 3.5
Identities = 18/70 (25%), Positives = 32/70 (45%)
Frame = +3
Query: 327 DLITDAAISTTAVVAKDASPSEGSEYVSADTSSSSAIVTIRSDEPTVDGKLINEEPKGTI 506
D++ A + K S GS+ V +++ ++ RSD+ +VD +N+ K
Sbjct: 56 DVVESTASAFAQAKNKSRSARRGSQVVDVESAGANRSTRRRSDQTSVDSVELNKPRK--- 112
Query: 507 NDEVTPAVNE 536
+ V P V E
Sbjct: 113 SKAVAPPVEE 122
>At1g47200.1 68414.m05223 MFP1 attachment factor, putative contains
similarity to MFP1 attachment factor 1 GI:7546725 from
[Lycopersicon esculentum] similar to MFP1 attachment
factor 1 [Glycine max] gi|7546729|gb|AAF63659
Length = 180
Score = 28.7 bits (61), Expect = 3.5
Identities = 16/50 (32%), Positives = 27/50 (54%)
Frame = +3
Query: 372 KDASPSEGSEYVSADTSSSSAIVTIRSDEPTVDGKLINEEPKGTINDEVT 521
+DA + E +S ++ S T++SD+ T KLI EE G ++ V+
Sbjct: 68 RDAVLNRLIETLSTESILSKRYGTLKSDDATTVAKLIEEEAYGVASNAVS 117
>At1g72150.1 68414.m08342 SEC14 cytosolic factor family protein /
phosphoglyceride transfer family protein similar to
SEC14-like protein 2 (Alpha-tocopherol associated
protein) (TAP) (bTAP) (Fragment) (SP:P58875) {Bos
taurus}; similar to GI:807956 from [Saccharomyces
cerevisiae]; contains Pfam PF00650 : CRAL/TRIO domain;
contains Pfam PF03765 : CRAL/TRIO, N-terminus
Length = 573
Score = 28.3 bits (60), Expect = 4.7
Identities = 21/100 (21%), Positives = 43/100 (43%)
Frame = +3
Query: 351 STTAVVAKDASPSEGSEYVSADTSSSSAIVTIRSDEPTVDGKLINEEPKGTINDEVTPAV 530
+TT V ++ P+ + + SS +A V +S+E + + E + ++ T V
Sbjct: 147 TTTEVKVEEEKPAVPA--AEEEKSSEAAPVETKSEEKPEEKAEVTTEKASSAEEDGTKTV 204
Query: 531 NEVSSGPSTIVAAPAVVVNDVIESPTGVSATEVINDEVSV 650
+ ++ + V V+E+ A V +EVS+
Sbjct: 205 EAIEESIVSVSPPESAVAPVVVETVAVAEAEPVEPEEVSI 244
>At1g62700.1 68414.m07077 no apical meristem (NAM) family protein
similar to NAC2 (GI:6456751) [Arabidopsis thaliana];
contains Pfam PF02365 : No apical meristem (NAM) protein
Length = 394
Score = 25.4 bits (53), Expect(2) = 5.5
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = +1
Query: 40 HHHGMLQHQNLTHRLRPT*ILKL 108
H++ M+QHQ H LR + L+L
Sbjct: 234 HYNQMVQHQQQNHHLRESMFLQL 256
Score = 21.0 bits (42), Expect(2) = 5.5
Identities = 7/21 (33%), Positives = 13/21 (61%)
Frame = +1
Query: 4 LMTSSP*RLTQHHHHGMLQHQ 66
+++SSP + +HH+ HQ
Sbjct: 188 IISSSPRQFLPNHHYNRHHHQ 208
>At5g55090.1 68418.m06867 protein kinase family protein contains
protein kinase domain, Pfam:PF00069
Length = 448
Score = 27.5 bits (58), Expect = 8.2
Identities = 14/42 (33%), Positives = 20/42 (47%), Gaps = 1/42 (2%)
Frame = +3
Query: 102 EASETALPASDAEKSETNTVS-LWNDDVTPSKNVKSVAADVS 224
E S + D E N+ + LW+DD P +K +A D S
Sbjct: 288 ETSRSRFIKEDHEDPFANSTNFLWDDDSLPGDRIKKLAGDES 329
>At3g49800.1 68416.m05445 BSD domain-containing protein contains
Pfam profile PF03909: BSD domain
Length = 428
Score = 27.5 bits (58), Expect = 8.2
Identities = 16/60 (26%), Positives = 29/60 (48%), Gaps = 2/60 (3%)
Frame = +3
Query: 399 EYVSADTSSSSAIVTIRSDEPTVDGKLINEEPKGTIND--EVTPAVNEVSSGPSTIVAAP 572
EY +T +++I SD+P+ L + P+G D E+T + G ++ +A P
Sbjct: 18 EYDQKETIKTNSIENSGSDQPSSPSVLQTQSPRGVKEDISELTKTLRSQLWGVASFLAPP 77
>At1g27850.1 68414.m03413 expressed protein similar to En/Spm-like
transposon protein GB:AAB95292 GI:2088658 from
[Arabidopsis thaliana]
Length = 1148
Score = 27.5 bits (58), Expect = 8.2
Identities = 16/48 (33%), Positives = 25/48 (52%)
Frame = +3
Query: 489 EPKGTINDEVTPAVNEVSSGPSTIVAAPAVVVNDVIESPTGVSATEVI 632
+P G ++ TP +S+G ST +A+PAV + S G S + I
Sbjct: 197 KPSGPVSRSPTPTSRRMSTG-STTMASPAVRGTSPVSSSRGNSPSPKI 243
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,446,980
Number of Sequences: 28952
Number of extensions: 184252
Number of successful extensions: 788
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 737
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 786
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1354097952
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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