Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30143
         (520 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase ...    24   0.93 
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    24   0.93 
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    24   0.93 
AM292352-1|CAL23164.1|  250|Tribolium castaneum gustatory recept...    24   0.93 
EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2 p...    23   1.2  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    22   3.7  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    22   3.7  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    22   3.7  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    22   3.7  
DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          21   5.0  
AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory recept...    21   5.0  
AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450 ...    21   6.5  
AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450 ...    21   6.5  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    21   8.7  

>AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase
           protein.
          Length = 677

 Score = 23.8 bits (49), Expect = 0.93
 Identities = 10/25 (40%), Positives = 12/25 (48%)
 Frame = -1

Query: 271 WSWLASLRSWPLRSVHLWKDRSREL 197
           W WL  L S    SVH+W     +L
Sbjct: 219 WIWLVWLLSQAWISVHIWSPNCDKL 243


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 23.8 bits (49), Expect = 0.93
 Identities = 10/25 (40%), Positives = 12/25 (48%)
 Frame = -1

Query: 271 WSWLASLRSWPLRSVHLWKDRSREL 197
           W WL  L S    SVH+W     +L
Sbjct: 452 WIWLVWLLSQAWISVHIWSPNCDKL 476


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 23.8 bits (49), Expect = 0.93
 Identities = 10/25 (40%), Positives = 12/25 (48%)
 Frame = -1

Query: 271 WSWLASLRSWPLRSVHLWKDRSREL 197
           W WL  L S    SVH+W     +L
Sbjct: 452 WIWLVWLLSQAWISVHIWSPNCDKL 476


>AM292352-1|CAL23164.1|  250|Tribolium castaneum gustatory receptor
           candidate 31 protein.
          Length = 250

 Score = 23.8 bits (49), Expect = 0.93
 Identities = 16/56 (28%), Positives = 24/56 (42%)
 Frame = -1

Query: 427 WEHSDLSYSNRSEAILFSHEPQRHLCPGTRRARLYCWSIWKRPRRLHQRLQQWSWL 260
           W   D+     S A +F  +         + AR+   ++WK+ R  H RL Q S L
Sbjct: 102 WTFIDVFIMLTSTAFVFRLKQLNAKVEMLKNARVKNTALWKQLRYEHYRLYQLSVL 157


>EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2
           protein.
          Length = 535

 Score = 23.4 bits (48), Expect = 1.2
 Identities = 14/33 (42%), Positives = 15/33 (45%)
 Frame = -3

Query: 215 GS*PRTVKPFLTKFAAMNPPMFPRPRKATFLSV 117
           G  P T   FL   A M PP  P P   TF S+
Sbjct: 158 GRAPLTYHQFLAIIACMGPPPQPEP-PVTFNSL 189



 Score = 21.8 bits (44), Expect = 3.7
 Identities = 11/35 (31%), Positives = 14/35 (40%)
 Frame = -2

Query: 318 GQYGNDHVDSINGCSNGVGWRHSVLGRCVQCIFGR 214
           GQ G   +D+I       GW H +    V C   R
Sbjct: 346 GQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTR 380


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 21.8 bits (44), Expect = 3.7
 Identities = 8/25 (32%), Positives = 12/25 (48%)
 Frame = -1

Query: 271 WSWLASLRSWPLRSVHLWKDRSREL 197
           W WL  L S    ++H+W  +   L
Sbjct: 465 WIWLLWLLSQTWITLHIWTPKCERL 489


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 21.8 bits (44), Expect = 3.7
 Identities = 8/25 (32%), Positives = 12/25 (48%)
 Frame = -1

Query: 271 WSWLASLRSWPLRSVHLWKDRSREL 197
           W WL  L S    ++H+W  +   L
Sbjct: 465 WIWLLWLLSQTWITLHIWTPKCERL 489


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 21.8 bits (44), Expect = 3.7
 Identities = 8/25 (32%), Positives = 12/25 (48%)
 Frame = -1

Query: 271 WSWLASLRSWPLRSVHLWKDRSREL 197
           W WL  L S    ++H+W  +   L
Sbjct: 465 WIWLLWLLSQTWITLHIWTPKCERL 489


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 21.8 bits (44), Expect = 3.7
 Identities = 8/25 (32%), Positives = 12/25 (48%)
 Frame = -1

Query: 271 WSWLASLRSWPLRSVHLWKDRSREL 197
           W WL  L S    ++H+W  +   L
Sbjct: 465 WIWLLWLLSQTWITLHIWTPKCERL 489


>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 21.4 bits (43), Expect = 5.0
 Identities = 8/27 (29%), Positives = 14/27 (51%)
 Frame = -3

Query: 161 PPMFPRPRKATFLSVLELYARLAAVYK 81
           PP  P PR  +F   +   +++  +YK
Sbjct: 731 PPPPPPPRVESFAETVRTVSKIPPLYK 757


>AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory receptor
           candidate 50 protein.
          Length = 350

 Score = 21.4 bits (43), Expect = 5.0
 Identities = 12/35 (34%), Positives = 15/35 (42%)
 Frame = -3

Query: 479 GASVNPSPFSKAIGKICLGTFGSIVLESIRSDPFF 375
           G S+N    S  +    LG FG  VL  +    FF
Sbjct: 114 GYSINYRRISIFVNLAILGVFGEFVLVFVPDYVFF 148


>AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 491

 Score = 21.0 bits (42), Expect = 6.5
 Identities = 12/31 (38%), Positives = 15/31 (48%)
 Frame = +2

Query: 92  PPDGRIVLTPTRMWLSSASETWEDSWLRTWL 184
           P D  +VLT T+    S    +  SWL T L
Sbjct: 85  PEDVELVLTDTKQNTKSFIYHFLHSWLGTGL 115


>AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q4 protein.
          Length = 491

 Score = 21.0 bits (42), Expect = 6.5
 Identities = 12/31 (38%), Positives = 15/31 (48%)
 Frame = +2

Query: 92  PPDGRIVLTPTRMWLSSASETWEDSWLRTWL 184
           P D  +VLT T+    S    +  SWL T L
Sbjct: 85  PEDVELVLTDTKQNTKSFIYHFLHSWLGTGL 115


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
           adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 6/18 (33%), Positives = 11/18 (61%)
 Frame = -2

Query: 513 SVLSTHDSSRYRCICESQ 460
           + + T+D   YRC+  S+
Sbjct: 479 TAIHTNDGGLYRCVASSK 496


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.316    0.132    0.373 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 132,464
Number of Sequences: 336
Number of extensions: 2963
Number of successful extensions: 15
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12468463
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)