Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV30143
(520 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g20930.1 68417.m03033 3-hydroxyisobutyrate dehydrogenase, put... 77 5e-15
At1g18270.1 68414.m02280 ketose-bisphosphate aldolase class-II f... 62 2e-10
At1g71170.1 68414.m08212 6-phosphogluconate dehydrogenase NAD-bi... 61 4e-10
At4g29120.1 68417.m04168 6-phosphogluconate dehydrogenase NAD-bi... 61 5e-10
At1g71180.1 68414.m08213 6-phosphogluconate dehydrogenase NAD-bi... 60 7e-10
At3g25530.1 68416.m03174 6-phosphogluconate dehydrogenase NAD-bi... 60 1e-09
At1g17650.1 68414.m02185 6-phosphogluconate dehydrogenase NAD-bi... 55 2e-08
At5g34930.1 68418.m04119 arogenate dehydrogenase identical to ar... 36 0.016
At1g64190.1 68414.m07272 6-phosphogluconate dehydrogenase family... 33 0.087
At3g18240.2 68416.m02321 expressed protein 31 0.35
At3g18240.1 68416.m02320 expressed protein 31 0.35
At5g41670.2 68418.m05063 6-phosphogluconate dehydrogenase family... 31 0.61
At5g41670.1 68418.m05062 6-phosphogluconate dehydrogenase family... 31 0.61
At4g21460.1 68417.m03104 expressed protein 30 1.1
At1g15710.1 68414.m01885 prephenate dehydrogenase family protein... 29 1.9
At5g02330.1 68418.m00156 DC1 domain-containing protein contains ... 29 2.5
At3g06990.1 68416.m00830 DC1 domain-containing protein contains ... 29 2.5
At3g59130.1 68416.m06592 DC1 domain-containing protein contains ... 28 3.3
At4g23000.1 68417.m03318 calcineurin-like phosphoesterase family... 28 4.3
At2g36400.1 68415.m04467 expressed protein nearly identical to t... 28 4.3
At4g30790.1 68417.m04362 expressed protein 27 5.7
At2g02700.1 68415.m00210 DC1 domain-containing protein contains ... 27 5.7
At1g28690.1 68414.m03533 pentatricopeptide (PPR) repeat-containi... 27 5.7
At5g02360.1 68418.m00159 DC1 domain-containing protein contains ... 27 7.6
At2g45480.1 68415.m05656 expressed protein 27 7.6
At1g19110.1 68414.m02377 inter-alpha-trypsin inhibitor heavy cha... 27 7.6
>At4g20930.1 68417.m03033 3-hydroxyisobutyrate dehydrogenase,
putative similar to SP|P29266 3-hydroxyisobutyrate
dehydrogenase, mitochondrial precursor (EC 1.1.1.31)
{Rattus norvegicus}; contains Pfam profile PF03446: NAD
binding domain of 6-phosphogluconate dehydrogenase
Length = 347
Score = 77.4 bits (182), Expect = 5e-15
Identities = 51/158 (32%), Positives = 80/158 (50%), Gaps = 12/158 (7%)
Frame = +1
Query: 82 LYTAARRAYSSNTDKNVAFLGLGNMGGFMAANLVKKGFTVRGYDPSKDALNAAAKNGVTP 261
L+ + + +SN +NV F+GLGNMG M NL++ G+ V +D ++D + + GV+
Sbjct: 24 LHRFSSSSQNSNQFQNVGFIGLGNMGFRMVNNLIRAGYKVTVHDINRDVMKMFTEMGVSS 83
Query: 262 ANSIXXXXXXXXXXXSILTSNKVVLDVYLGKDGVVAHAK--KGSLLIDSSTIDPNVPKQI 435
+ ++L S+ V+DVY G +G++ + +L IDSSTIDP ++I
Sbjct: 84 RETPYEVAQDSEVVITMLPSSSHVMDVYTGTNGLLLGENDIRPALFIDSSTIDPQTTRKI 143
Query: 436 FPIALEKGLG----------FTDAPVSGGVMGAQNATL 519
L DAPVSGGV+ A+ TL
Sbjct: 144 SLAVSNCNLKEKRDNWEKPVMLDAPVSGGVLAAEAGTL 181
>At1g18270.1 68414.m02280 ketose-bisphosphate aldolase class-II
family protein low similarity to KbaY
(tagatose-1,6-bisphosphate aldolase) [Escherichia coli]
GI:8895753; contains Pfam profile PF01116:
Fructose-bisphosphate aldolase class-II
Length = 1373
Score = 62.1 bits (144), Expect = 2e-10
Identities = 46/128 (35%), Positives = 60/128 (46%), Gaps = 3/128 (2%)
Frame = +1
Query: 130 VAFLGLGNMGGFMAANLVKKGFTVRGYDPSKDALNAAAKNGVTPANSIXXXXXXXXXXXS 309
+ F+GLG MG MAA+L+K F+V GYD K L G ANS
Sbjct: 324 IGFIGLGAMGFGMAAHLLKSNFSVCGYDVYKPTLVRFENAGGLAANSPAEVTKDVDVLVI 383
Query: 310 ILTSNKVVLDVYLGKDGVVAHAKKGSLLIDSSTIDPNVPKQIFPIALE---KGLGFTDAP 480
++T+ DV G G V G+ ++ +ST+ P Q+ LE K L DAP
Sbjct: 384 MVTNEVQAEDVLYGHLGAVEAIPSGATVVLASTVSPAFVSQL-ERRLENEGKDLKLVDAP 442
Query: 481 VSGGVMGA 504
VSGGV A
Sbjct: 443 VSGGVKRA 450
Score = 39.5 bits (88), Expect = 0.001
Identities = 24/94 (25%), Positives = 47/94 (50%)
Frame = +1
Query: 130 VAFLGLGNMGGFMAANLVKKGFTVRGYDPSKDALNAAAKNGVTPANSIXXXXXXXXXXXS 309
V F+GL + +A++L++ GF V+ ++ S + + + G +S
Sbjct: 5 VGFVGLDSFSFELASSLLRSGFKVQAFEISTELVEKFIELGGHKCDSPADVGKAAAAVVV 64
Query: 310 ILTSNKVVLDVYLGKDGVVAHAKKGSLLIDSSTI 411
+L+ + DV G +GV+ +K ++L+ SSTI
Sbjct: 65 VLSHPDQIQDVIFGDEGVMKGLQKDAVLLLSSTI 98
>At1g71170.1 68414.m08212 6-phosphogluconate dehydrogenase
NAD-binding domain-containing protein contains Pfam
profile: PF03446 NAD binding domain of
6-phosphogluconate
Length = 299
Score = 61.3 bits (142), Expect = 4e-10
Identities = 35/130 (26%), Positives = 62/130 (47%)
Frame = +1
Query: 130 VAFLGLGNMGGFMAANLVKKGFTVRGYDPSKDALNAAAKNGVTPANSIXXXXXXXXXXXS 309
+ ++G+G MG M ++++ G++V Y G ANS +
Sbjct: 16 IGWIGIGIMGSAMVSHILAAGYSVTVYARDLRKTKDLQTKGGRTANSPKELGEMSDVVFT 75
Query: 310 ILTSNKVVLDVYLGKDGVVAHAKKGSLLIDSSTIDPNVPKQIFPIALEKGLGFTDAPVSG 489
I+ ++ V + LG DGV++ K G + +D ++ P + ++I+ A + DAPVSG
Sbjct: 76 IVGNSNDVRSLLLGDDGVLSGLKPGGVTVDMTSSKPGLAREIYAEARRRDCWAVDAPVSG 135
Query: 490 GVMGAQNATL 519
G GA+ L
Sbjct: 136 GDAGAREGKL 145
>At4g29120.1 68417.m04168 6-phosphogluconate dehydrogenase
NAD-binding domain-containing protein similar to
SP|P23523 2-hydroxy-3-oxopropionate reductase (EC
1.1.1.60) (Tartronate semialdehyde reductase)
{Escherichia coli}; contains Pfam profile PF03446: NAD
binding domain of 6-phosphogluconate dehydrogenase
Length = 334
Score = 60.9 bits (141), Expect = 5e-10
Identities = 41/137 (29%), Positives = 67/137 (48%), Gaps = 1/137 (0%)
Frame = +1
Query: 112 SNTDKNVAFLGLGNMGGFMAANLVKKGFTVRGYDPSKDALNAAAKNGVTPANSIXXXXXX 291
SNT + ++G G MG M +L+K G+TV ++ + G A+S
Sbjct: 36 SNT--KIGWIGTGVMGRSMCGHLIKAGYTVTVFNRTISKAQTLIDMGANVADSPNSVAEQ 93
Query: 292 XXXXXSILTSNKVVLDVYLG-KDGVVAHAKKGSLLIDSSTIDPNVPKQIFPIALEKGLGF 468
+I+ V V L K G ++ ++G +L+D +T +P++ ++I A K
Sbjct: 94 SDVVFTIVGYPSDVRHVLLDPKSGALSGLRQGGVLVDMTTSEPSLAEEIAKAASFKNCFS 153
Query: 469 TDAPVSGGVMGAQNATL 519
DAPVSGG +GA+N L
Sbjct: 154 IDAPVSGGDLGAKNGKL 170
>At1g71180.1 68414.m08213 6-phosphogluconate dehydrogenase
NAD-binding domain-containing protein similar to
SP|P23523 2-hydroxy-3-oxopropionate reductase (EC
1.1.1.60) (Tartronate semialdehyde reductase)
{Escherichia coli}; contains Pfam profile PF03446: NAD
binding domain of 6-phosphogluconate dehydrogenase
Length = 318
Score = 60.5 bits (140), Expect = 7e-10
Identities = 41/155 (26%), Positives = 68/155 (43%), Gaps = 3/155 (1%)
Frame = +1
Query: 64 ILSTQCLYTAARRAYSSNTDKN---VAFLGLGNMGGFMAANLVKKGFTVRGYDPSKDALN 234
IL + C T Y D + + ++G+G MG M ++++ G++V Y
Sbjct: 12 ILHSFCGNTEMETPYPKLIDPSKTRIGWIGIGIMGSAMVSHIIAAGYSVTVYARDLRKTK 71
Query: 235 AAAKNGVTPANSIXXXXXXXXXXXSILTSNKVVLDVYLGKDGVVAHAKKGSLLIDSSTID 414
G ANS +I+ + V + LG DGV++ G + +D ++
Sbjct: 72 DLQTKGARIANSPKELAEMSDVVFTIVGNFNDVRSLLLGDDGVLSGLTPGGVTVDMTSSK 131
Query: 415 PNVPKQIFPIALEKGLGFTDAPVSGGVMGAQNATL 519
P + ++I A + DAPVSGG GA+ TL
Sbjct: 132 PGLAREIHAEARRRNCWAVDAPVSGGDAGAREGTL 166
>At3g25530.1 68416.m03174 6-phosphogluconate dehydrogenase
NAD-binding domain-containing protein low similarity to
SP|P23523 2-hydroxy-3-oxopropionate reductase (EC
1.1.1.60) (Tartronate semialdehyde reductase)
{Escherichia coli}; contains Pfam profile PF03446: NAD
binding domain of 6-phosphogluconate dehydrogenase;
supporting cDNA gi|15375067|gb|AY044183.1|
Length = 289
Score = 59.7 bits (138), Expect = 1e-09
Identities = 39/130 (30%), Positives = 58/130 (44%)
Frame = +1
Query: 130 VAFLGLGNMGGFMAANLVKKGFTVRGYDPSKDALNAAAKNGVTPANSIXXXXXXXXXXXS 309
V FLGLG MG M+ NL+K GF V ++ + + ++G + S +
Sbjct: 3 VGFLGLGIMGKAMSMNLLKNGFKVTVWNRTLSKCDELVEHGASVCESPAEVIKKCKYTIA 62
Query: 310 ILTSNKVVLDVYLGKDGVVAHAKKGSLLIDSSTIDPNVPKQIFPIALEKGLGFTDAPVSG 489
+L+ L V K GV+ +G ID ST+D +I KG F + PVSG
Sbjct: 63 MLSDPCAALSVVFDKGGVLEQICEGKGYIDMSTVDAETSLKINEAITGKGGRFVEGPVSG 122
Query: 490 GVMGAQNATL 519
A++ L
Sbjct: 123 SKKPAEDGQL 132
>At1g17650.1 68414.m02185 6-phosphogluconate dehydrogenase
NAD-binding domain-containing protein low similarity to
SP|P23523 2-hydroxy-3-oxopropionate reductase (EC
1.1.1.60) (Tartronate semialdehyde reductase)
{Escherichia coli}; contains Pfam profile PF03446: NAD
binding domain of 6-phosphogluconate dehydrogenase
Length = 343
Score = 55.2 bits (127), Expect = 2e-08
Identities = 37/131 (28%), Positives = 58/131 (44%)
Frame = +1
Query: 127 NVAFLGLGNMGGFMAANLVKKGFTVRGYDPSKDALNAAAKNGVTPANSIXXXXXXXXXXX 306
++ FLG+G MG MA NL+K G V ++ +K + G +S
Sbjct: 53 SIGFLGMGIMGSPMAQNLIKAGCDVTVWNRTKSKCDPLVGLGAKYKSSPEEVTATCDLTF 112
Query: 307 SILTSNKVVLDVYLGKDGVVAHAKKGSLLIDSSTIDPNVPKQIFPIALEKGLGFTDAPVS 486
++L + +DV GK+G + G +D ST+D I + G F +APVS
Sbjct: 113 AMLADPESAIDVACGKNGAIFGISSGKGYVDVSTVDVASSILISKQIKDTGALFLEAPVS 172
Query: 487 GGVMGAQNATL 519
G A++ L
Sbjct: 173 GSKKPAEDGQL 183
>At5g34930.1 68418.m04119 arogenate dehydrogenase identical to
arogenate dehydrogenase GI:16903098 from [Arabidopsis
thaliana]; contains Pfam profile: PF02153: prephenate
dehydrogenase
Length = 640
Score = 35.9 bits (79), Expect = 0.016
Identities = 18/43 (41%), Positives = 25/43 (58%)
Frame = +1
Query: 130 VAFLGLGNMGGFMAANLVKKGFTVRGYDPSKDALNAAAKNGVT 258
+ +G GN G F+ +VK+G TV Y S D + AAK GV+
Sbjct: 367 IGIVGFGNFGQFLGKTMVKQGHTVLAYSRS-DYTDEAAKLGVS 408
Score = 29.9 bits (64), Expect = 1.1
Identities = 15/43 (34%), Positives = 25/43 (58%)
Frame = +1
Query: 130 VAFLGLGNMGGFMAANLVKKGFTVRGYDPSKDALNAAAKNGVT 258
+A +G GN G F+A L+ +G + + S D +AA + GV+
Sbjct: 55 IAIIGFGNYGQFLAETLISQGHILFAHSRS-DHSSAARRLGVS 96
>At1g64190.1 68414.m07272 6-phosphogluconate dehydrogenase family
protein contains Pfam profiles: PF00393
6-phosphogluconate dehydrogenase C-terminal domain,
PF03446 NAD binding domain of 6-phosphogluconate
Length = 487
Score = 33.5 bits (73), Expect = 0.087
Identities = 36/134 (26%), Positives = 55/134 (41%), Gaps = 7/134 (5%)
Frame = +1
Query: 130 VAFLGLGNMGGFMAANLVKKGFTVRGYD--PSK--DALNAAAKNGVTPAN---SIXXXXX 288
+ GL MG +A N+ +KGF + Y+ SK + L+ AA G P + S
Sbjct: 9 IGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETLDRAAVEGNLPVSGQYSPRDFVL 68
Query: 289 XXXXXXSILTSNKVVLDVYLGKDGVVAHAKKGSLLIDSSTIDPNVPKQIFPIALEKGLGF 468
S++ K V D + + G +ID ++ A +KGL +
Sbjct: 69 SIQRPRSLIILVKAGAPVDQTIDAFSEYMEPGDCIIDGGNEWYQNTERRISEAEQKGLLY 128
Query: 469 TDAPVSGGVMGAQN 510
VSGG GA+N
Sbjct: 129 LGMGVSGGEEGARN 142
>At3g18240.2 68416.m02321 expressed protein
Length = 419
Score = 31.5 bits (68), Expect = 0.35
Identities = 20/51 (39%), Positives = 28/51 (54%), Gaps = 3/51 (5%)
Frame = +3
Query: 321 Q*SRARRVPGQRWRCGSCEKRIASDRFEY---DRSECSQTDLPYSLRERAG 464
Q R R + G+R+ G E I S+RFE+ +R +C +T Y L E AG
Sbjct: 328 QAKRLRELVGKRYHSGKDELTITSERFEHREENRKDCLRT--LYGLIEEAG 376
>At3g18240.1 68416.m02320 expressed protein
Length = 419
Score = 31.5 bits (68), Expect = 0.35
Identities = 20/51 (39%), Positives = 28/51 (54%), Gaps = 3/51 (5%)
Frame = +3
Query: 321 Q*SRARRVPGQRWRCGSCEKRIASDRFEY---DRSECSQTDLPYSLRERAG 464
Q R R + G+R+ G E I S+RFE+ +R +C +T Y L E AG
Sbjct: 328 QAKRLRELVGKRYHSGKDELTITSERFEHREENRKDCLRT--LYGLIEEAG 376
>At5g41670.2 68418.m05063 6-phosphogluconate dehydrogenase family
protein contains Pfam profiles: PF00393
6-phosphogluconate dehydrogenase C-terminal domain,
PF03446 NAD binding domain of 6-phosphogluconate
Length = 487
Score = 30.7 bits (66), Expect = 0.61
Identities = 38/138 (27%), Positives = 59/138 (42%), Gaps = 11/138 (7%)
Frame = +1
Query: 130 VAFLGLGNMGGFMAANLVKKGFTVRGYD--PSK--DALNAAAKNGVTPANSIXXXXXXXX 297
+ GL MG +A N+ KGF + Y+ SK + L+ A+ G P +
Sbjct: 9 IGLAGLAVMGQNLALNIADKGFPISVYNRTTSKVDETLDRASNEGKLP---VAGQYSPRD 65
Query: 298 XXXSILTSNKVVLDVYLGK--DGVVA----HAKKGSLLIDSSTI-DPNVPKQIFPIALEK 456
SI V++ V G D ++ + + G +ID N ++I A +K
Sbjct: 66 FVLSIQRPRSVIILVKAGAPVDQTISALSEYMEPGDCIIDGGNEWYQNTERRIVE-AEKK 124
Query: 457 GLGFTDAPVSGGVMGAQN 510
GL + VSGG GA+N
Sbjct: 125 GLLYLGMGVSGGEEGARN 142
>At5g41670.1 68418.m05062 6-phosphogluconate dehydrogenase family
protein contains Pfam profiles: PF00393
6-phosphogluconate dehydrogenase C-terminal domain,
PF03446 NAD binding domain of 6-phosphogluconate
Length = 487
Score = 30.7 bits (66), Expect = 0.61
Identities = 38/138 (27%), Positives = 59/138 (42%), Gaps = 11/138 (7%)
Frame = +1
Query: 130 VAFLGLGNMGGFMAANLVKKGFTVRGYD--PSK--DALNAAAKNGVTPANSIXXXXXXXX 297
+ GL MG +A N+ KGF + Y+ SK + L+ A+ G P +
Sbjct: 9 IGLAGLAVMGQNLALNIADKGFPISVYNRTTSKVDETLDRASNEGKLP---VAGQYSPRD 65
Query: 298 XXXSILTSNKVVLDVYLGK--DGVVA----HAKKGSLLIDSSTI-DPNVPKQIFPIALEK 456
SI V++ V G D ++ + + G +ID N ++I A +K
Sbjct: 66 FVLSIQRPRSVIILVKAGAPVDQTISALSEYMEPGDCIIDGGNEWYQNTERRIVE-AEKK 124
Query: 457 GLGFTDAPVSGGVMGAQN 510
GL + VSGG GA+N
Sbjct: 125 GLLYLGMGVSGGEEGARN 142
>At4g21460.1 68417.m03104 expressed protein
Length = 415
Score = 29.9 bits (64), Expect = 1.1
Identities = 19/53 (35%), Positives = 28/53 (52%), Gaps = 3/53 (5%)
Frame = +3
Query: 315 DQQ*SRARRVPGQRWRCGSCEKRIASDRFEY---DRSECSQTDLPYSLRERAG 464
+ Q R R + G+R+ G E I +RFE+ +R +C +T Y L E AG
Sbjct: 322 NHQAKRLRELVGKRYHSGKDELTITCERFEHREENRKDCLRT--LYGLIEEAG 372
>At1g15710.1 68414.m01885 prephenate dehydrogenase family protein
contains Pfam profile: PF02153 prephenate dehydrogenase
Length = 358
Score = 29.1 bits (62), Expect = 1.9
Identities = 15/52 (28%), Positives = 26/52 (50%), Gaps = 2/52 (3%)
Frame = +1
Query: 88 TAARRAYSSNTDKNVAFLGLGNMGGFMAANLVKKGFTVRGYDPS--KDALNA 237
T + Y ++ +A LG GN G F++ L++ G + + S DA N+
Sbjct: 47 TQLKSEYRKSSALKIAVLGFGNFGQFLSKTLIRHGHDLITHSRSDYSDAANS 98
>At5g02330.1 68418.m00156 DC1 domain-containing protein contains
Pfam profile PF03107: DC1 domain
Length = 656
Score = 28.7 bits (61), Expect = 2.5
Identities = 9/28 (32%), Positives = 17/28 (60%)
Frame = +3
Query: 342 VPGQRWRCGSCEKRIASDRFEYDRSECS 425
+P +W CG C K++ ++ Y ++CS
Sbjct: 301 LPSGKWSCGVCRKKVDNNCGAYTCNKCS 328
>At3g06990.1 68416.m00830 DC1 domain-containing protein contains
Pfam profile PF03107: DC1 domain
Length = 539
Score = 28.7 bits (61), Expect = 2.5
Identities = 13/44 (29%), Positives = 21/44 (47%)
Frame = +3
Query: 273 CCSR*WSRRGRFHIDQQ*SRARRVPGQRWRCGSCEKRIASDRFE 404
C S +R HID+ R + G ++C SC+K R++
Sbjct: 300 CASLPRRKRSILHIDKLDLRVKNKAGNHYKCRSCQKLFDGFRYK 343
>At3g59130.1 68416.m06592 DC1 domain-containing protein contains
Pfam profile PF03107: DC1 domain
Length = 329
Score = 28.3 bits (60), Expect = 3.3
Identities = 13/45 (28%), Positives = 23/45 (51%), Gaps = 1/45 (2%)
Frame = +3
Query: 387 ASDRFEYDRSECSQTDLPYSLRERAGIHRCT-CIWRSHGCSERYP 518
+ + ++D C ++D+P+ +RER + CT C H YP
Sbjct: 30 SEQKVKHDCFGCGKSDVPWEIRERPLYYYCTICDLEFHKNCLEYP 74
>At4g23000.1 68417.m03318 calcineurin-like phosphoesterase family
protein contains Pfam profile: PF00149 calcineurin-like
phosphoesterase
Length = 932
Score = 27.9 bits (59), Expect = 4.3
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = +3
Query: 366 GSCEKRIASDRFEYDRSECSQTDLP 440
G C+ R+A D Y R C+Q+D P
Sbjct: 630 GRCKLRMAGDLHHYMRHSCTQSDGP 654
>At2g36400.1 68415.m04467 expressed protein nearly identical to
transcription activator GRL3 [Arabidopsis thaliana]
GI:21539884 (unpublished); supporting cDNA
gi|21539883|gb|AY102636.1|
Length = 398
Score = 27.9 bits (59), Expect = 4.3
Identities = 10/22 (45%), Positives = 14/22 (63%)
Frame = +3
Query: 300 GRFHIDQQ*SRARRVPGQRWRC 365
GR +D + R RR G++WRC
Sbjct: 139 GRAAMDPEPGRCRRTDGKKWRC 160
>At4g30790.1 68417.m04362 expressed protein
Length = 1148
Score = 27.5 bits (58), Expect = 5.7
Identities = 14/39 (35%), Positives = 22/39 (56%)
Frame = -1
Query: 394 SEAILFSHEPQRHLCPGTRRARLYCWSIWKRPRRLHQRL 278
+EA+ E ++HL + +++C S KR R L QRL
Sbjct: 632 AEALQAKDEYEKHLLLMLKEKQMHCDSYEKRIRELEQRL 670
>At2g02700.1 68415.m00210 DC1 domain-containing protein contains
Pfam profile PF03107: DC1 domain
Length = 499
Score = 27.5 bits (58), Expect = 5.7
Identities = 10/27 (37%), Positives = 14/27 (51%)
Frame = +3
Query: 342 VPGQRWRCGSCEKRIASDRFEYDRSEC 422
+P +W CG C + I SD Y + C
Sbjct: 288 LPSGKWCCGICRREIDSDYGAYSCNVC 314
>At1g28690.1 68414.m03533 pentatricopeptide (PPR) repeat-containing
protein contains six TIGRFAM TIGR00756:
pentatricopeptide repeat domains; contains five Pfam
PF01535: PPR repeats
Length = 520
Score = 27.5 bits (58), Expect = 5.7
Identities = 15/33 (45%), Positives = 21/33 (63%), Gaps = 2/33 (6%)
Frame = +1
Query: 307 SILTSNKVVLDVY--LGKDGVVAHAKKGSLLID 399
S+LTS++V V+ + K GV H K GS L+D
Sbjct: 284 SVLTSHEVGQQVHAQIMKSGVYTHIKMGSSLLD 316
>At5g02360.1 68418.m00159 DC1 domain-containing protein contains
Pfam profile PF03107: DC1 domain
Length = 342
Score = 27.1 bits (57), Expect = 7.6
Identities = 8/27 (29%), Positives = 15/27 (55%)
Frame = +3
Query: 342 VPGQRWRCGSCEKRIASDRFEYDRSEC 422
+P +W CG C + + +D Y ++C
Sbjct: 130 LPSGKWSCGVCRQMVDNDYGAYSCNKC 156
>At2g45480.1 68415.m05656 expressed protein
Length = 429
Score = 27.1 bits (57), Expect = 7.6
Identities = 12/30 (40%), Positives = 18/30 (60%), Gaps = 3/30 (10%)
Frame = +3
Query: 291 SRRGRFHIDQ---Q*SRARRVPGQRWRCGS 371
S +G HID + +R RR G++WRC +
Sbjct: 76 SNKGVTHIDTLETEPTRCRRTDGKKWRCSN 105
>At1g19110.1 68414.m02377 inter-alpha-trypsin inhibitor heavy
chain-related similar to SP|Q61704 Inter-alpha-trypsin
inhibitor heavy chain H3 precursor {Mus musculus};
contains Pfam profile PF00092: von Willebrand factor
type A domain
Length = 754
Score = 27.1 bits (57), Expect = 7.6
Identities = 16/52 (30%), Positives = 23/52 (44%)
Frame = +1
Query: 325 KVVLDVYLGKDGVVAHAKKGSLLIDSSTIDPNVPKQIFPIALEKGLGFTDAP 480
K+ +Y GKD VA + + + SST P +P A+ G D P
Sbjct: 14 KLAKRIYFGKDRAVAAPRPPAPMDRSSTTQPYLPTAPMVYAVIPDPGIVDNP 65
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.316 0.132 0.373
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,552,884
Number of Sequences: 28952
Number of extensions: 271563
Number of successful extensions: 905
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 862
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 900
length of database: 12,070,560
effective HSP length: 76
effective length of database: 9,870,208
effective search space used: 947539968
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
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