SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30142
         (695 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X76228-1|CAA53814.1|  226|Homo sapiens vacuolar H+ ATPase E subu...   220   4e-57
X71491-1|CAA50592.1|  226|Homo sapiens vacuolar proton ATPase pr...   220   4e-57
CR456385-1|CAG30271.1|  226|Homo sapiens ATP6E protein.               220   4e-57
BT007128-1|AAP35792.1|  226|Homo sapiens ATPase, H+ transporting...   220   4e-57
BC004443-1|AAH04443.1|  226|Homo sapiens ATPase, H+ transporting...   220   4e-57
BC034808-1|AAH34808.1|  226|Homo sapiens ATPase, H+ transporting...   195   1e-49
BC008981-1|AAH08981.1|  226|Homo sapiens ATPase, H+ transporting...   195   1e-49
AK058055-1|BAB71643.1|  226|Homo sapiens protein ( Homo sapiens ...   195   1e-49
AC018682-1|AAY14833.1|  226|Homo sapiens unknown protein.             195   1e-49
AB074759-1|BAC00847.1|  226|Homo sapiens V-ATPase E1 subunit pro...   195   1e-49
BC112028-1|AAI12029.1|  259|Homo sapiens hypothetical protein FL...    33   1.3  
BC112026-1|AAI12027.1|  259|Homo sapiens hypothetical protein LO...    33   1.3  
AK097823-1|BAC05178.1|  259|Homo sapiens protein ( Homo sapiens ...    33   1.3  
AJ320497-1|CAC60121.1| 4523|Homo sapiens axonemal beta heavy cha...    30   9.1  

>X76228-1|CAA53814.1|  226|Homo sapiens vacuolar H+ ATPase E subunit
           protein.
          Length = 226

 Score =  220 bits (537), Expect = 4e-57
 Identities = 114/223 (51%), Positives = 149/223 (66%)
 Frame = +2

Query: 2   SDADVQKQIKHMMAFIEQXXXXXXXXXXXXXXXXFNIEKGRLVQQQRLKIMXXXXXXXXX 181
           SDADVQKQIKHMMAFIEQ                FNIEKGRLVQ QRLKIM         
Sbjct: 4   SDADVQKQIKHMMAFIEQEANEKAEEIDAKAEEEFNIEKGRLVQTQRLKIMEYYEKKEKQ 63

Query: 182 XXXXXXIQSSNMLNQARLKVLKVREDHVRNVLDEARKRLAEVPKDTKLYPELLVTLIVQA 361
                 IQ SN++NQARLKVL+ R+D + ++L+EA++RL++V KDT  Y  LL  L++Q 
Sbjct: 64  IEQQKKIQMSNLMNQARLKVLRARDDLITDLLNEAKQRLSKVVKDTTRYQVLLDGLVLQG 123

Query: 362 LFQLMEPTVTIRVRQTDKALVESLLGKAQTDYKNKIKKDVVLKVDTENFLSPDTCGGIEL 541
           L+QL+EP + +R R+ D  LV++ + KA   YK   K DV +++D E++L  D  GG+E+
Sbjct: 124 LYQLLEPRMIVRCRKQDFPLVKAAVQKAIPMYKIATKNDVDVQIDQESYLPEDIAGGVEI 183

Query: 542 VAARGRIKISNTLESRLELIAQQLLPEIRNALFGRNPNRKFTD 670
                +IK+SNTLESRL+LIAQQ++PE+R ALFG N NRKF D
Sbjct: 184 YNGDRKIKVSNTLESRLDLIAQQMMPEVRGALFGANANRKFLD 226


>X71491-1|CAA50592.1|  226|Homo sapiens vacuolar proton ATPase
           protein.
          Length = 226

 Score =  220 bits (537), Expect = 4e-57
 Identities = 114/223 (51%), Positives = 149/223 (66%)
 Frame = +2

Query: 2   SDADVQKQIKHMMAFIEQXXXXXXXXXXXXXXXXFNIEKGRLVQQQRLKIMXXXXXXXXX 181
           SDADVQKQIKHMMAFIEQ                FNIEKGRLVQ QRLKIM         
Sbjct: 4   SDADVQKQIKHMMAFIEQEANEKAEEIDRKAEEEFNIEKGRLVQTQRLKIMEYYEKKEKQ 63

Query: 182 XXXXXXIQSSNMLNQARLKVLKVREDHVRNVLDEARKRLAEVPKDTKLYPELLVTLIVQA 361
                 IQ SN++NQARLKVL+ R+D + ++L+EA++RL++V KDT  Y  LL  L++Q 
Sbjct: 64  IEQQKKIQMSNLMNQARLKVLRARDDLITDLLNEAKQRLSKVVKDTTRYQVLLDGLVLQG 123

Query: 362 LFQLMEPTVTIRVRQTDKALVESLLGKAQTDYKNKIKKDVVLKVDTENFLSPDTCGGIEL 541
           L+QL+EP + +R R+ D  LV++ + KA   YK   K DV +++D E++L  D  GG+E+
Sbjct: 124 LYQLLEPRMIVRCRKQDFPLVKAAVQKAIPMYKIATKNDVDVQIDQESYLPEDIAGGVEI 183

Query: 542 VAARGRIKISNTLESRLELIAQQLLPEIRNALFGRNPNRKFTD 670
                +IK+SNTLESRL+LIAQQ++PE+R ALFG N NRKF D
Sbjct: 184 YNGDRKIKVSNTLESRLDLIAQQMMPEVRGALFGANANRKFLD 226


>CR456385-1|CAG30271.1|  226|Homo sapiens ATP6E protein.
          Length = 226

 Score =  220 bits (537), Expect = 4e-57
 Identities = 114/223 (51%), Positives = 149/223 (66%)
 Frame = +2

Query: 2   SDADVQKQIKHMMAFIEQXXXXXXXXXXXXXXXXFNIEKGRLVQQQRLKIMXXXXXXXXX 181
           SDADVQKQIKHMMAFIEQ                FNIEKGRLVQ QRLKIM         
Sbjct: 4   SDADVQKQIKHMMAFIEQEANEKAEEIDAKAEEEFNIEKGRLVQTQRLKIMEYYEKKEKQ 63

Query: 182 XXXXXXIQSSNMLNQARLKVLKVREDHVRNVLDEARKRLAEVPKDTKLYPELLVTLIVQA 361
                 IQ SN++NQARLKVL+ R+D + ++L+EA++RL++V KDT  Y  LL  L++Q 
Sbjct: 64  IEQQKKIQMSNLMNQARLKVLRARDDLITDLLNEAKQRLSKVVKDTTRYQVLLDGLVLQG 123

Query: 362 LFQLMEPTVTIRVRQTDKALVESLLGKAQTDYKNKIKKDVVLKVDTENFLSPDTCGGIEL 541
           L+QL+EP + +R R+ D  LV++ + KA   YK   K DV +++D E++L  D  GG+E+
Sbjct: 124 LYQLLEPRMIVRCRKQDFPLVKAAVQKAIPMYKIATKNDVDVQIDQESYLPEDIAGGVEI 183

Query: 542 VAARGRIKISNTLESRLELIAQQLLPEIRNALFGRNPNRKFTD 670
                +IK+SNTLESRL+LIAQQ++PE+R ALFG N NRKF D
Sbjct: 184 YNGDRKIKVSNTLESRLDLIAQQMMPEVRGALFGANANRKFLD 226


>BT007128-1|AAP35792.1|  226|Homo sapiens ATPase, H+ transporting,
           lysosomal 31kDa, V1 subunit E isoform 1 protein.
          Length = 226

 Score =  220 bits (537), Expect = 4e-57
 Identities = 114/223 (51%), Positives = 149/223 (66%)
 Frame = +2

Query: 2   SDADVQKQIKHMMAFIEQXXXXXXXXXXXXXXXXFNIEKGRLVQQQRLKIMXXXXXXXXX 181
           SDADVQKQIKHMMAFIEQ                FNIEKGRLVQ QRLKIM         
Sbjct: 4   SDADVQKQIKHMMAFIEQEANEKAEEIDAKAEEEFNIEKGRLVQTQRLKIMEYYEKKEKQ 63

Query: 182 XXXXXXIQSSNMLNQARLKVLKVREDHVRNVLDEARKRLAEVPKDTKLYPELLVTLIVQA 361
                 IQ SN++NQARLKVL+ R+D + ++L+EA++RL++V KDT  Y  LL  L++Q 
Sbjct: 64  IEQQKKIQMSNLMNQARLKVLRARDDLITDLLNEAKQRLSKVVKDTTRYQVLLDGLVLQG 123

Query: 362 LFQLMEPTVTIRVRQTDKALVESLLGKAQTDYKNKIKKDVVLKVDTENFLSPDTCGGIEL 541
           L+QL+EP + +R R+ D  LV++ + KA   YK   K DV +++D E++L  D  GG+E+
Sbjct: 124 LYQLLEPRMIVRCRKQDFPLVKAAVQKAIPMYKIATKNDVDVQIDQESYLPEDIAGGVEI 183

Query: 542 VAARGRIKISNTLESRLELIAQQLLPEIRNALFGRNPNRKFTD 670
                +IK+SNTLESRL+LIAQQ++PE+R ALFG N NRKF D
Sbjct: 184 YNGDRKIKVSNTLESRLDLIAQQMMPEVRGALFGANANRKFLD 226


>BC004443-1|AAH04443.1|  226|Homo sapiens ATPase, H+ transporting,
           lysosomal 31kDa, V1 subunit E1 protein.
          Length = 226

 Score =  220 bits (537), Expect = 4e-57
 Identities = 114/223 (51%), Positives = 149/223 (66%)
 Frame = +2

Query: 2   SDADVQKQIKHMMAFIEQXXXXXXXXXXXXXXXXFNIEKGRLVQQQRLKIMXXXXXXXXX 181
           SDADVQKQIKHMMAFIEQ                FNIEKGRLVQ QRLKIM         
Sbjct: 4   SDADVQKQIKHMMAFIEQEANEKAEEIDAKAEEEFNIEKGRLVQTQRLKIMEYYEKKEKQ 63

Query: 182 XXXXXXIQSSNMLNQARLKVLKVREDHVRNVLDEARKRLAEVPKDTKLYPELLVTLIVQA 361
                 IQ SN++NQARLKVL+ R+D + ++L+EA++RL++V KDT  Y  LL  L++Q 
Sbjct: 64  IEQQKKIQMSNLMNQARLKVLRARDDLITDLLNEAKQRLSKVVKDTTRYQVLLDGLVLQG 123

Query: 362 LFQLMEPTVTIRVRQTDKALVESLLGKAQTDYKNKIKKDVVLKVDTENFLSPDTCGGIEL 541
           L+QL+EP + +R R+ D  LV++ + KA   YK   K DV +++D E++L  D  GG+E+
Sbjct: 124 LYQLLEPRMIVRCRKQDFPLVKAAVQKAIPMYKIATKNDVDVQIDQESYLPEDIAGGVEI 183

Query: 542 VAARGRIKISNTLESRLELIAQQLLPEIRNALFGRNPNRKFTD 670
                +IK+SNTLESRL+LIAQQ++PE+R ALFG N NRKF D
Sbjct: 184 YNGDRKIKVSNTLESRLDLIAQQMMPEVRGALFGANANRKFLD 226


>BC034808-1|AAH34808.1|  226|Homo sapiens ATPase, H+ transporting,
           lysosomal 31kDa, V1 subunit E2 protein.
          Length = 226

 Score =  195 bits (475), Expect = 1e-49
 Identities = 104/221 (47%), Positives = 138/221 (62%)
 Frame = +2

Query: 2   SDADVQKQIKHMMAFIEQXXXXXXXXXXXXXXXXFNIEKGRLVQQQRLKIMXXXXXXXXX 181
           SD DV+KQIKHMMAFIEQ                FNIEKGRLVQ QRLKIM         
Sbjct: 4   SDVDVKKQIKHMMAFIEQEANEKAEEIDAKAEEEFNIEKGRLVQTQRLKIMEYYEKKEKQ 63

Query: 182 XXXXXXIQSSNMLNQARLKVLKVREDHVRNVLDEARKRLAEVPKDTKLYPELLVTLIVQA 361
                 I  S M NQARLKVL+ R D + ++L EA+ RL+ + +D ++Y  LL  L++Q 
Sbjct: 64  IEQQKKILMSTMRNQARLKVLRARNDLISDLLSEAKLRLSRIVEDPEVYQGLLDKLVLQG 123

Query: 362 LFQLMEPTVTIRVRQTDKALVESLLGKAQTDYKNKIKKDVVLKVDTENFLSPDTCGGIEL 541
           L +L+EP + +R R  D  LVE+ + KA  +Y    +K V +++D E +L+ +  GG+E+
Sbjct: 124 LLRLLEPVMIVRCRPQDLLLVEAAVQKAIPEYMTISQKHVEVQIDKEAYLAVNAAGGVEV 183

Query: 542 VAARGRIKISNTLESRLELIAQQLLPEIRNALFGRNPNRKF 664
            +   RIK+SNTLESRL+L A+Q +PEIR ALFG N NRKF
Sbjct: 184 YSGNQRIKVSNTLESRLDLSAKQKMPEIRMALFGANTNRKF 224


>BC008981-1|AAH08981.1|  226|Homo sapiens ATPase, H+ transporting,
           lysosomal 31kDa, V1 subunit E2 protein.
          Length = 226

 Score =  195 bits (475), Expect = 1e-49
 Identities = 104/221 (47%), Positives = 138/221 (62%)
 Frame = +2

Query: 2   SDADVQKQIKHMMAFIEQXXXXXXXXXXXXXXXXFNIEKGRLVQQQRLKIMXXXXXXXXX 181
           SD DV+KQIKHMMAFIEQ                FNIEKGRLVQ QRLKIM         
Sbjct: 4   SDVDVKKQIKHMMAFIEQEANEKAEEIDAKAEEEFNIEKGRLVQTQRLKIMEYYEKKEKQ 63

Query: 182 XXXXXXIQSSNMLNQARLKVLKVREDHVRNVLDEARKRLAEVPKDTKLYPELLVTLIVQA 361
                 I  S M NQARLKVL+ R D + ++L EA+ RL+ + +D ++Y  LL  L++Q 
Sbjct: 64  IEQQKKILMSTMRNQARLKVLRARNDLISDLLSEAKLRLSRIVEDPEVYQGLLDKLVLQG 123

Query: 362 LFQLMEPTVTIRVRQTDKALVESLLGKAQTDYKNKIKKDVVLKVDTENFLSPDTCGGIEL 541
           L +L+EP + +R R  D  LVE+ + KA  +Y    +K V +++D E +L+ +  GG+E+
Sbjct: 124 LLRLLEPVMIVRCRPQDLLLVEAAVQKAIPEYMTISQKHVEVQIDKEAYLAVNAAGGVEV 183

Query: 542 VAARGRIKISNTLESRLELIAQQLLPEIRNALFGRNPNRKF 664
            +   RIK+SNTLESRL+L A+Q +PEIR ALFG N NRKF
Sbjct: 184 YSGNQRIKVSNTLESRLDLSAKQKMPEIRMALFGANTNRKF 224


>AK058055-1|BAB71643.1|  226|Homo sapiens protein ( Homo sapiens
           cDNA FLJ25326 fis, clone TST00424. ).
          Length = 226

 Score =  195 bits (475), Expect = 1e-49
 Identities = 104/221 (47%), Positives = 138/221 (62%)
 Frame = +2

Query: 2   SDADVQKQIKHMMAFIEQXXXXXXXXXXXXXXXXFNIEKGRLVQQQRLKIMXXXXXXXXX 181
           SD DV+KQIKHMMAFIEQ                FNIEKGRLVQ QRLKIM         
Sbjct: 4   SDVDVKKQIKHMMAFIEQEANEKAEEIDAKAEEEFNIEKGRLVQTQRLKIMEYYEKKEKQ 63

Query: 182 XXXXXXIQSSNMLNQARLKVLKVREDHVRNVLDEARKRLAEVPKDTKLYPELLVTLIVQA 361
                 I  S M NQARLKVL+ R D + ++L EA+ RL+ + +D ++Y  LL  L++Q 
Sbjct: 64  IEQQKKILMSTMRNQARLKVLRARNDLISDLLSEAKLRLSRIVEDPEVYQGLLDKLVLQG 123

Query: 362 LFQLMEPTVTIRVRQTDKALVESLLGKAQTDYKNKIKKDVVLKVDTENFLSPDTCGGIEL 541
           L +L+EP + +R R  D  LVE+ + KA  +Y    +K V +++D E +L+ +  GG+E+
Sbjct: 124 LLRLLEPVMIVRCRPQDLLLVEAAVQKAIPEYMTISQKHVEVQIDKEAYLAVNAAGGVEV 183

Query: 542 VAARGRIKISNTLESRLELIAQQLLPEIRNALFGRNPNRKF 664
            +   RIK+SNTLESRL+L A+Q +PEIR ALFG N NRKF
Sbjct: 184 YSGNQRIKVSNTLESRLDLSAKQKMPEIRMALFGANTNRKF 224


>AC018682-1|AAY14833.1|  226|Homo sapiens unknown protein.
          Length = 226

 Score =  195 bits (475), Expect = 1e-49
 Identities = 104/221 (47%), Positives = 138/221 (62%)
 Frame = +2

Query: 2   SDADVQKQIKHMMAFIEQXXXXXXXXXXXXXXXXFNIEKGRLVQQQRLKIMXXXXXXXXX 181
           SD DV+KQIKHMMAFIEQ                FNIEKGRLVQ QRLKIM         
Sbjct: 4   SDVDVKKQIKHMMAFIEQEANEKAEEIDAKAEEEFNIEKGRLVQTQRLKIMEYYEKKEKQ 63

Query: 182 XXXXXXIQSSNMLNQARLKVLKVREDHVRNVLDEARKRLAEVPKDTKLYPELLVTLIVQA 361
                 I  S M NQARLKVL+ R D + ++L EA+ RL+ + +D ++Y  LL  L++Q 
Sbjct: 64  IEQQKKILMSTMRNQARLKVLRARNDLISDLLSEAKLRLSRIVEDPEVYQGLLDKLVLQG 123

Query: 362 LFQLMEPTVTIRVRQTDKALVESLLGKAQTDYKNKIKKDVVLKVDTENFLSPDTCGGIEL 541
           L +L+EP + +R R  D  LVE+ + KA  +Y    +K V +++D E +L+ +  GG+E+
Sbjct: 124 LLRLLEPVMIVRCRPQDLLLVEAAVQKAIPEYMTISQKHVEVQIDKEAYLAVNAAGGVEV 183

Query: 542 VAARGRIKISNTLESRLELIAQQLLPEIRNALFGRNPNRKF 664
            +   RIK+SNTLESRL+L A+Q +PEIR ALFG N NRKF
Sbjct: 184 YSGNQRIKVSNTLESRLDLSAKQKMPEIRMALFGANTNRKF 224


>AB074759-1|BAC00847.1|  226|Homo sapiens V-ATPase E1 subunit
           protein.
          Length = 226

 Score =  195 bits (475), Expect = 1e-49
 Identities = 104/221 (47%), Positives = 138/221 (62%)
 Frame = +2

Query: 2   SDADVQKQIKHMMAFIEQXXXXXXXXXXXXXXXXFNIEKGRLVQQQRLKIMXXXXXXXXX 181
           SD DV+KQIKHMMAFIEQ                FNIEKGRLVQ QRLKIM         
Sbjct: 4   SDVDVKKQIKHMMAFIEQEANEKAEEIDAKAEEEFNIEKGRLVQTQRLKIMEYYEKKEKQ 63

Query: 182 XXXXXXIQSSNMLNQARLKVLKVREDHVRNVLDEARKRLAEVPKDTKLYPELLVTLIVQA 361
                 I  S M NQARLKVL+ R D + ++L EA+ RL+ + +D ++Y  LL  L++Q 
Sbjct: 64  IEQQKKILMSTMRNQARLKVLRARNDLISDLLSEAKLRLSRIVEDPEVYQGLLDKLVLQG 123

Query: 362 LFQLMEPTVTIRVRQTDKALVESLLGKAQTDYKNKIKKDVVLKVDTENFLSPDTCGGIEL 541
           L +L+EP + +R R  D  LVE+ + KA  +Y    +K V +++D E +L+ +  GG+E+
Sbjct: 124 LLRLLEPVMIVRCRPQDLLLVEAAVQKAIPEYMTISQKHVEVQIDKEAYLAVNAAGGVEV 183

Query: 542 VAARGRIKISNTLESRLELIAQQLLPEIRNALFGRNPNRKF 664
            +   RIK+SNTLESRL+L A+Q +PEIR ALFG N NRKF
Sbjct: 184 YSGNQRIKVSNTLESRLDLSAKQKMPEIRMALFGANTNRKF 224


>BC112028-1|AAI12029.1|  259|Homo sapiens hypothetical protein
           FLJ40504 protein.
          Length = 259

 Score = 32.7 bits (71), Expect = 1.3
 Identities = 19/42 (45%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
 Frame = -1

Query: 317 CPLALQPGACELRQVHYVRDLHELSVPSDELGS-ACSKIGSS 195
           CPLAL PG  EL   H +  LH+L VP    G+  C+++ SS
Sbjct: 29  CPLALLPGQHELH--HLLHPLHQLPVPGHCPGTQLCAQLVSS 68


>BC112026-1|AAI12027.1|  259|Homo sapiens hypothetical protein
           LOC284085 protein.
          Length = 259

 Score = 32.7 bits (71), Expect = 1.3
 Identities = 19/42 (45%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
 Frame = -1

Query: 317 CPLALQPGACELRQVHYVRDLHELSVPSDELGS-ACSKIGSS 195
           CPLAL PG  EL   H +  LH+L VP    G+  C+++ SS
Sbjct: 29  CPLALLPGQHELH--HLLHPLHQLPVPGHCPGTQLCAQLVSS 68


>AK097823-1|BAC05178.1|  259|Homo sapiens protein ( Homo sapiens
           cDNA FLJ40504 fis, clone TESTI2045509, highly similar to
           KERATIN, TYPE I CYTOSKELETAL 18. ).
          Length = 259

 Score = 32.7 bits (71), Expect = 1.3
 Identities = 19/42 (45%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
 Frame = -1

Query: 317 CPLALQPGACELRQVHYVRDLHELSVPSDELGS-ACSKIGSS 195
           CPLAL PG  EL   H +  LH+L VP    G+  C+++ SS
Sbjct: 29  CPLALLPGQHELH--HLLHPLHQLPVPGHCPGTQLCAQLVSS 68


>AJ320497-1|CAC60121.1| 4523|Homo sapiens axonemal beta heavy chain
            dynein type 11 protein.
          Length = 4523

 Score = 29.9 bits (64), Expect = 9.1
 Identities = 18/64 (28%), Positives = 34/64 (53%), Gaps = 2/64 (3%)
 Frame = +2

Query: 263  VRNVLDEARKRLAEVPK-DT-KLYPELLVTLIVQALFQLMEPTVTIRVRQTDKALVESLL 436
            + N+++E RK     P  DT K+Y E +  ++V+  FQ +   +   ++ T+K L  +  
Sbjct: 884  IHNLVEENRKLFKANPSLDTWKIYVEFIDDIVVEGFFQAIMHDLDFFLKNTEKQLKPAPF 943

Query: 437  GKAQ 448
             +AQ
Sbjct: 944  FQAQ 947


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 95,240,649
Number of Sequences: 237096
Number of extensions: 2094838
Number of successful extensions: 5975
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 5701
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5963
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8007229802
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -