Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV30140
(690 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g23530.1 68418.m02761 expressed protein contains similarity t... 39 0.003
At3g27320.1 68416.m03414 expressed protein low similarity to PrM... 38 0.008
At1g49660.1 68414.m05569 expressed protein 38 0.008
At1g68620.1 68414.m07841 expressed protein similar to PrMC3 [Pin... 37 0.014
At5g15860.2 68418.m01856 expressed protein 36 0.019
At5g15860.1 68418.m01855 expressed protein 36 0.019
At5g14310.1 68418.m01673 expressed protein low similarity to PrM... 36 0.025
At5g27320.1 68418.m03262 expressed protein similar to PrMC3 [Pin... 36 0.033
At3g05120.1 68416.m00556 expressed protein low similarity to PrM... 35 0.044
At3g02410.1 68416.m00228 hypothetical protein weak similarity to... 35 0.044
At5g16080.1 68418.m01879 expressed protein similar to PrMC3 [Pin... 35 0.058
At5g06570.2 68418.m00742 expressed protein similar to PrMC3 [Pin... 33 0.14
At5g06570.1 68418.m00741 expressed protein similar to PrMC3 [Pin... 33 0.14
At3g63010.1 68416.m07078 expressed protein similar to PrMC3 [Pin... 33 0.24
At2g45600.1 68415.m05670 expressed protein low similarity to PrM... 33 0.24
At1g47480.1 68414.m05267 expressed protein similar to PrMC3 [Pin... 33 0.24
At1g26120.1 68414.m03188 esterase-related contains similaity to ... 32 0.41
At1g49650.1 68414.m05568 cell death associated protein-related s... 31 0.54
At2g03550.1 68415.m00315 expressed protein similar to PrMC3 [Pin... 31 0.72
At5g13100.1 68418.m01501 expressed protein 30 1.3
At1g50300.1 68414.m05639 zinc finger (Ran-binding) family protei... 30 1.3
At4g21430.1 68417.m03097 transcription factor jumonji (jmjC) dom... 30 1.7
At3g48690.1 68416.m05317 expressed protein similar to PrMC3 [Pin... 30 1.7
At3g59030.1 68416.m06579 transparent testa 12 protein (TT12) / m... 29 2.2
At5g62180.1 68418.m07805 expressed protein similar to PrMC3, Pin... 29 2.9
At3g23710.1 68416.m02981 chloroplast inner membrane import prote... 29 2.9
At1g58227.1 68414.m06616 hypothetical protein 29 2.9
At3g52250.1 68416.m05742 myb family transcription factor contain... 28 5.1
At3g59610.1 68416.m06651 F-box family protein / jacalin lectin f... 28 6.7
At1g19190.1 68414.m02389 expressed protein contains similarity t... 28 6.7
At1g12350.1 68414.m01427 DNA/panthothenate metabolism flavoprote... 28 6.7
At1g12050.1 68414.m01391 fumarylacetoacetase, putative similar t... 28 6.7
At5g03280.1 68418.m00277 ethylene-insensitive 2 (EIN2) identical... 27 8.9
At3g48700.1 68416.m05318 expressed protein similar to PrMC3 [Pin... 27 8.9
At3g07390.1 68416.m00881 auxin-responsive protein / auxin-induce... 27 8.9
At2g38080.1 68415.m04674 laccase, putative / diphenol oxidase, p... 27 8.9
>At5g23530.1 68418.m02761 expressed protein contains similarity to
PrMC3 [Pinus radiata] GI:5487873
Length = 335
Score = 39.1 bits (87), Expect = 0.003
Identities = 23/73 (31%), Positives = 38/73 (52%), Gaps = 4/73 (5%)
Frame = +2
Query: 374 IDPVFAKSYVGDENC-LFLNVYTPSTDGAFLPVMIWIHGGGFKWGSGNTNLYG---PDFL 541
++ V +V D++ L+ +YTP G +PV+++ HGGGF + S N Y F
Sbjct: 57 VNIVSTSDFVVDQSRDLWFRLYTPHVSGDKIPVVVFFHGGGFAFLSPNAYPYDNVCRRFA 116
Query: 542 VDRDVVVMTINYR 580
V+++NYR
Sbjct: 117 RKLPAYVISVNYR 129
>At3g27320.1 68416.m03414 expressed protein low similarity to PrMC3
[Pinus radiata] GI:5487873
Length = 460
Score = 37.5 bits (83), Expect = 0.008
Identities = 22/57 (38%), Positives = 30/57 (52%), Gaps = 8/57 (14%)
Frame = +2
Query: 434 YTPSTDGAF---LPVMIWIHGGGFKWGSGNTNLYGPDFLVDR-----DVVVMTINYR 580
Y PS+ G LPVM+ HGGG W SG+ + DF R D++V+ + YR
Sbjct: 154 YAPSSSGGNSRKLPVMLQFHGGG--WVSGSNDSVANDFFCRRMAKHCDIIVLAVGYR 208
>At1g49660.1 68414.m05569 expressed protein
Length = 319
Score = 37.5 bits (83), Expect = 0.008
Identities = 34/110 (30%), Positives = 55/110 (50%), Gaps = 9/110 (8%)
Frame = +2
Query: 368 AQIDPVF---AKSYV-GDENCLFLNVYTPS-----TDGAFLPVMIWIHGGGFKWGSGNTN 520
A +DP + +K + EN L + ++ P T G LP++I+IHGG + S +
Sbjct: 32 ASLDPTYDVVSKDVIYSPENNLSVRLFLPHKSTKLTAGNKLPLLIYIHGGAWIIESPFSP 91
Query: 521 LYGPDFLVDRDVVVMTINYRCGALGFLSLNTPEVPGNAGIKDIVQAIRWV 670
LY ++L + VV + N C A+ PE P A +D+ AI+W+
Sbjct: 92 LY-HNYLTE---VVKSAN--CLAVSVQYRRAPEDPVPAAYEDVWSAIQWI 135
>At1g68620.1 68414.m07841 expressed protein similar to PrMC3 [Pinus
radiata] GI:5487873
Length = 336
Score = 36.7 bits (81), Expect = 0.014
Identities = 28/88 (31%), Positives = 44/88 (50%), Gaps = 4/88 (4%)
Frame = +2
Query: 419 LFLNVYTPSTDGAFLPVMIWIHGGGFKWGSGNTNLYGPDFLVDRDV----VVMTINYRCG 586
L++ + T + + LP++++ HGGGF GS + Y +FL +VM++NYR
Sbjct: 75 LYVPMTTTKSSVSKLPLIVYFHGGGFCVGSASWLCY-HEFLARLSARSRCLVMSVNYRL- 132
Query: 587 ALGFLSLNTPEVPGNAGIKDIVQAIRWV 670
PE P A +D V AI W+
Sbjct: 133 --------APENPLPAAYEDGVNAILWL 152
>At5g15860.2 68418.m01856 expressed protein
Length = 299
Score = 36.3 bits (80), Expect = 0.019
Identities = 25/72 (34%), Positives = 40/72 (55%), Gaps = 5/72 (6%)
Frame = +2
Query: 404 GDENCLFLNVYTPSTDGAFLPVMIWIHGG----GFK-WGSGNTNLYGPDFLVDRDVVVMT 568
GD+ L++Y PS + PV++++ GG G+K WGS L G L +RD++V
Sbjct: 136 GDQPRNRLDLYLPSNNDGLKPVVVFVTGGAWIIGYKAWGS----LLGMQ-LAERDIIVAC 190
Query: 569 INYRCGALGFLS 604
++YR G +S
Sbjct: 191 LDYRNFPQGTIS 202
>At5g15860.1 68418.m01855 expressed protein
Length = 427
Score = 36.3 bits (80), Expect = 0.019
Identities = 25/72 (34%), Positives = 40/72 (55%), Gaps = 5/72 (6%)
Frame = +2
Query: 404 GDENCLFLNVYTPSTDGAFLPVMIWIHGG----GFK-WGSGNTNLYGPDFLVDRDVVVMT 568
GD+ L++Y PS + PV++++ GG G+K WGS L G L +RD++V
Sbjct: 136 GDQPRNRLDLYLPSNNDGLKPVVVFVTGGAWIIGYKAWGS----LLGMQ-LAERDIIVAC 190
Query: 569 INYRCGALGFLS 604
++YR G +S
Sbjct: 191 LDYRNFPQGTIS 202
>At5g14310.1 68418.m01673 expressed protein low similarity to PrMC3
[Pinus radiata] GI:5487873
Length = 446
Score = 35.9 bits (79), Expect = 0.025
Identities = 22/56 (39%), Positives = 30/56 (53%), Gaps = 7/56 (12%)
Frame = +2
Query: 434 YTPST--DGAFLPVMIWIHGGGFKWGSGNTNLYGPDFLVDR-----DVVVMTINYR 580
Y PS + LPVM+ HGGG W SG+++ DF R DV+V+ + YR
Sbjct: 140 YAPSAKRNSRKLPVMLQFHGGG--WVSGSSDSAANDFFCRRIAKVCDVIVLAVGYR 193
>At5g27320.1 68418.m03262 expressed protein similar to PrMC3 [Pinus
radiata] GI:5487873
Length = 344
Score = 35.5 bits (78), Expect = 0.033
Identities = 20/49 (40%), Positives = 29/49 (59%), Gaps = 5/49 (10%)
Frame = +2
Query: 449 DGAFLPVMIWIHGGGFKWGSGNTNLYGPDFLVDRDV-----VVMTINYR 580
DG +PV+++ HGG F S N+ +Y D L R V VV+++NYR
Sbjct: 100 DGEIVPVIVFFHGGSFAHSSANSAIY--DTLCRRLVGLCGAVVVSVNYR 146
>At3g05120.1 68416.m00556 expressed protein low similarity to PrMC3
[Pinus radiata] GI:5487873
Length = 345
Score = 35.1 bits (77), Expect = 0.044
Identities = 23/71 (32%), Positives = 35/71 (49%), Gaps = 5/71 (7%)
Frame = +2
Query: 383 VFAKSYVGDENCLFLNVYTPSTDGAFLPVMIWIHGGGFKWGSGNTNLYGPDFLVDRDV-- 556
V+ +Y E + DG +PV+++ HGG F S N+ +Y D L R V
Sbjct: 80 VYRPAYADQEQPPSILDLEKPVDGDIVPVILFFHGGSFAHSSANSAIY--DTLCRRLVGL 137
Query: 557 ---VVMTINYR 580
VV+++NYR
Sbjct: 138 CKCVVVSVNYR 148
>At3g02410.1 68416.m00228 hypothetical protein weak similarity to
kynurenine formamidase [Mus musculus] GI:21552719
Length = 422
Score = 35.1 bits (77), Expect = 0.044
Identities = 29/91 (31%), Positives = 46/91 (50%), Gaps = 5/91 (5%)
Frame = +2
Query: 425 LNVYTPSTDGAFLPVMIWIHGG----GFK-WGSGNTNLYGPDFLVDRDVVVMTINYRCGA 589
L++Y P T PV++++ GG G+K WGS L G L +RD++V ++YR
Sbjct: 138 LDLYIPPTSDGLKPVVVFVTGGAWIIGYKAWGS----LLGLQ-LAERDIIVACLDYR--- 189
Query: 590 LGFLSLNTPEVPGNAGIKDIVQAIRWVKDNI 682
N P+ + + D Q I +V +NI
Sbjct: 190 ------NFPQGTISDMVSDAAQGISFVCNNI 214
>At5g16080.1 68418.m01879 expressed protein similar to PrMC3 [Pinus
radiata] GI:5487873
Length = 344
Score = 34.7 bits (76), Expect = 0.058
Identities = 23/64 (35%), Positives = 33/64 (51%), Gaps = 8/64 (12%)
Frame = +2
Query: 413 NCLFLNVYTPSTDGAF----LPVMIWIHGGGFKWGSGNTNLYGPDFLVDRDV----VVMT 568
N + VY P A LP++++ HGGGF GS + Y DFL V V+++
Sbjct: 72 NDTWTRVYIPDAAAASPSVTLPLLVYFHGGGFCVGSAAWSCY-HDFLTSLAVKARCVIVS 130
Query: 569 INYR 580
+NYR
Sbjct: 131 VNYR 134
>At5g06570.2 68418.m00742 expressed protein similar to PrMC3 [Pinus
radiata] GI:5487873
Length = 329
Score = 33.5 bits (73), Expect = 0.14
Identities = 17/44 (38%), Positives = 26/44 (59%), Gaps = 2/44 (4%)
Frame = +2
Query: 383 VFAKSYVGDENCLFLNVYTP--STDGAFLPVMIWIHGGGFKWGS 508
+F S N L L +Y P +++ LPV+++ HGGGF +GS
Sbjct: 48 LFKDSIYHKPNNLHLRLYKPISASNRTALPVVVFFHGGGFCFGS 91
>At5g06570.1 68418.m00741 expressed protein similar to PrMC3 [Pinus
radiata] GI:5487873
Length = 329
Score = 33.5 bits (73), Expect = 0.14
Identities = 17/44 (38%), Positives = 26/44 (59%), Gaps = 2/44 (4%)
Frame = +2
Query: 383 VFAKSYVGDENCLFLNVYTP--STDGAFLPVMIWIHGGGFKWGS 508
+F S N L L +Y P +++ LPV+++ HGGGF +GS
Sbjct: 48 LFKDSIYHKPNNLHLRLYKPISASNRTALPVVVFFHGGGFCFGS 91
>At3g63010.1 68416.m07078 expressed protein similar to PrMC3 [Pinus
radiata] GI:5487873
Length = 358
Score = 32.7 bits (71), Expect = 0.24
Identities = 24/89 (26%), Positives = 39/89 (43%), Gaps = 3/89 (3%)
Frame = +2
Query: 425 LNVYTPSTDGAFLPVMIWIHGGGFKWGSGNTNLYGP---DFLVDRDVVVMTINYRCGALG 595
L + P + +PV+I+ HGG F S N+ +Y + VVV++++YR
Sbjct: 94 LELTKPLSTTEIVPVLIFFHGGSFTHSSANSAIYDTFCRRLVTICGVVVVSVDYR----- 148
Query: 596 FLSLNTPEVPGNAGIKDIVQAIRWVKDNI 682
+PE D A+ WVK +
Sbjct: 149 ----RSPEHRYPCAYDDGWNALNWVKSRV 173
>At2g45600.1 68415.m05670 expressed protein low similarity to PrMC3
[Pinus radiata] GI:5487873
Length = 329
Score = 32.7 bits (71), Expect = 0.24
Identities = 24/93 (25%), Positives = 44/93 (47%), Gaps = 5/93 (5%)
Frame = +2
Query: 413 NCLFLNVYTPST--DGAFLPVMIWIHGGGFKWGSGNTNLYGPDF--LVDR-DVVVMTINY 577
N F+ ++ P + LP++++ HGGGF S + + + DR +++++ Y
Sbjct: 48 NNTFIRIFKPRNIPPESKLPILVYFHGGGFILYSAASAPFHESCTKMADRLQTIILSVEY 107
Query: 578 RCGALGFLSLNTPEVPGNAGIKDIVQAIRWVKD 676
R PE A +D V+AI W++D
Sbjct: 108 RL---------APEHRLPAAYEDAVEAILWLRD 131
>At1g47480.1 68414.m05267 expressed protein similar to PrMC3 [Pinus
radiata] GI:5487873
Length = 314
Score = 32.7 bits (71), Expect = 0.24
Identities = 27/94 (28%), Positives = 47/94 (50%), Gaps = 10/94 (10%)
Frame = +2
Query: 329 DGIRDATAEGNVCAQ-IDP---VFAKSYVGDENC-LFLNVYTPST--DGAFLPVMIWIHG 487
DG + A VC +DP VF+K + + L +Y P + G +P+M++ HG
Sbjct: 21 DGTVERLAGTEVCPPGLDPITGVFSKDIIIEPKTGLSARIYRPFSIQPGQKIPLMLYFHG 80
Query: 488 GGFKWGSGNTNLYGPDF--LVDR-DVVVMTINYR 580
G F S + Y +V++ +V+ +++NYR
Sbjct: 81 GAFLISSTSFPSYHTSLNKIVNQANVIAVSVNYR 114
>At1g26120.1 68414.m03188 esterase-related contains similaity to
esterase 6 GI:606998 from [Drosophila simulans] and
esterase GI:12584120 from [Sphingomonas elodea]
Length = 476
Score = 31.9 bits (69), Expect = 0.41
Identities = 28/81 (34%), Positives = 41/81 (50%), Gaps = 6/81 (7%)
Frame = +2
Query: 380 PVFAKSYV-GDENCLFLNVYTPSTDGAFLPVMIWIHGG----GFK-WGSGNTNLYGPDFL 541
P +S V GD+ L++Y P PV+ ++ GG G+K WGS L G L
Sbjct: 178 PYVRRSIVYGDQPRNRLDLYLPKNSTGPKPVVAFVTGGAWIIGYKAWGS----LLGQQ-L 232
Query: 542 VDRDVVVMTINYRCGALGFLS 604
+RD++V I+YR G +S
Sbjct: 233 SERDIIVACIDYRNFPQGSIS 253
>At1g49650.1 68414.m05568 cell death associated protein-related
similar to PrMC3 [Pinus radiata] GI:5487873; weak
similarity to cell death associated protein [Nicotiana
tabacum] GI:7417008, hsr203J [Nicotiana tabacum]
GI:22830761
Length = 374
Score = 31.5 bits (68), Expect = 0.54
Identities = 24/73 (32%), Positives = 37/73 (50%)
Frame = +2
Query: 452 GAFLPVMIWIHGGGFKWGSGNTNLYGPDFLVDRDVVVMTINYRCGALGFLSLNTPEVPGN 631
G LP++I+ HGG + S + +Y +FL + VV + N C A+ PE P
Sbjct: 125 GNKLPLLIYFHGGAWINESPFSPIYH-NFLTE---VVKSAN--CLAVSVQYRRAPEDPVP 178
Query: 632 AGIKDIVQAIRWV 670
A +D AI+W+
Sbjct: 179 AAYEDTWSAIQWI 191
>At2g03550.1 68415.m00315 expressed protein similar to PrMC3 [Pinus
radiata] GI:5487873; contains an
esterase/lipase/thioesterase active site serine domain
(prosite: PS50187)
Length = 312
Score = 31.1 bits (67), Expect = 0.72
Identities = 25/92 (27%), Positives = 38/92 (41%), Gaps = 1/92 (1%)
Frame = +2
Query: 410 ENCLFLNVYTPS-TDGAFLPVMIWIHGGGFKWGSGNTNLYGPDFLVDRDVVVMTINYRCG 586
E L L +Y P LP++I+ HGGGF + + P + V N C
Sbjct: 50 EKNLSLRIYLPEKVTVKKLPILIYFHGGGFIIETA----FSPPYHTFLTSAVAAAN--CL 103
Query: 587 ALGFLSLNTPEVPGNAGIKDIVQAIRWVKDNI 682
A+ PE P +D +++WV +I
Sbjct: 104 AISVNYRRAPEFPVPIPYEDSWDSLKWVLTHI 135
>At5g13100.1 68418.m01501 expressed protein
Length = 354
Score = 30.3 bits (65), Expect = 1.3
Identities = 14/44 (31%), Positives = 24/44 (54%)
Frame = +2
Query: 401 VGDENCLFLNVYTPSTDGAFLPVMIWIHGGGFKWGSGNTNLYGP 532
V +ENC+F + P ++ +PV +++ G G W G + Y P
Sbjct: 295 VEEENCVFFLPHKPRSEVLEVPVFLFMKGTG--WCGGGADHYEP 336
>At1g50300.1 68414.m05639 zinc finger (Ran-binding) family protein /
RNA recognition motif (RRM)-containing protein similar
to SP|Q27294 RNA-binding protein cabeza {Drosophila
melanogaster}; contains Pfam profiles: PF00076 RNA
recognition motif (aka RRM, RBD, or RNP domain),
PF00641: Zn-finger in Ran binding protein and others
Length = 372
Score = 30.3 bits (65), Expect = 1.3
Identities = 17/45 (37%), Positives = 19/45 (42%), Gaps = 1/45 (2%)
Frame = -1
Query: 318 GDCGALNRKEPNGGFAYGIPWKL*KAFPDGLFTIRPWSCP-CSTV 187
G GA + GG G P K P GLF W+CP C V
Sbjct: 171 GSMGAGRGRGRGGGADGGAPGKQPSGAPTGLFGPNDWACPMCGNV 215
>At4g21430.1 68417.m03097 transcription factor jumonji (jmjC)
domain-containing protein contains Pfam domain, PF02373:
jmjC domain
Length = 728
Score = 29.9 bits (64), Expect = 1.7
Identities = 14/39 (35%), Positives = 23/39 (58%)
Frame = -1
Query: 300 NRKEPNGGFAYGIPWKL*KAFPDGLFTIRPWSCPCSTVT 184
N+K+ NGGF+ + +L + P+G+ I P S S V+
Sbjct: 137 NKKKSNGGFSEFVGEELTRVLPNGIMAISPPSPTTSNVS 175
>At3g48690.1 68416.m05317 expressed protein similar to PrMC3 [Pinus
radiata] GI:5487873
Length = 324
Score = 29.9 bits (64), Expect = 1.7
Identities = 27/99 (27%), Positives = 41/99 (41%), Gaps = 4/99 (4%)
Frame = +2
Query: 398 YVGDENCLFLNVYTPSTDGAF----LPVMIWIHGGGFKWGSGNTNLYGPDFLVDRDVVVM 565
Y D N L + +Y P A LP++++ HGGGF + + P + V
Sbjct: 47 YSADNN-LSVRIYLPEKAAAETDSKLPLLVYFHGGGFIIETA----FSPTYHTFLTTSVS 101
Query: 566 TINYRCGALGFLSLNTPEVPGNAGIKDIVQAIRWVKDNI 682
N C A+ PE P + D A++WV +I
Sbjct: 102 ASN--CVAVSVDYRRAPEHPISVPFDDSWTALKWVFTHI 138
>At3g59030.1 68416.m06579 transparent testa 12 protein (TT12) /
multidrug transporter-like protein similar to ripening
regulated protein DDTFR18 [Lycopersicon esculentum]
GI:12231296, putative multidrug efflux protein NorM -
Vibrio parahaemolyticus, EMBL:AB010463; contains Pfam
profile PF01554: Uncharacterized membrane protein
family; identical to cDNA multidrug transporter-like
protein (tt12) GI:13624642, SP|Q9LYT3 TRANSPARENT TESTA
12 protein {Arabidopsis thaliana}, multidrug
transporter-like protein [Arabidopsis thaliana]
GI:13624643
Length = 507
Score = 29.5 bits (63), Expect = 2.2
Identities = 8/22 (36%), Positives = 16/22 (72%)
Frame = +1
Query: 466 GHDLDPRWWVQVGIRQYQLVWT 531
G + PRWW+++ + + +L+WT
Sbjct: 36 GSTVTPRWWLKLAVWESKLLWT 57
>At5g62180.1 68418.m07805 expressed protein similar to PrMC3, Pinus
radiata, GI:5487873
Length = 327
Score = 29.1 bits (62), Expect = 2.9
Identities = 25/75 (33%), Positives = 39/75 (52%), Gaps = 4/75 (5%)
Frame = +2
Query: 461 LPVMIWIHGGGFKWGSGNTNLYGPDFL--VDRDV--VVMTINYRCGALGFLSLNTPEVPG 628
LP++++ HGGGF S + L+ DF V RD+ +V++ +YR PE
Sbjct: 80 LPIVVYYHGGGFILCSVDMQLF-HDFCSEVARDLNAIVVSPSYRL---------APEHRL 129
Query: 629 NAGIKDIVQAIRWVK 673
A D V+A+ W+K
Sbjct: 130 PAAYDDGVEALDWIK 144
>At3g23710.1 68416.m02981 chloroplast inner membrane import protein
Tic22, putative similar to Tic22 [Pisum sativum]
gi|3769671|gb|AAC64606; contains Pfam domain PF04278:
Tic22-like family
Length = 313
Score = 29.1 bits (62), Expect = 2.9
Identities = 14/45 (31%), Positives = 23/45 (51%)
Frame = +2
Query: 23 LSHECSE*IKHLCNELNKILINNSGVNNEFPTMISAVNEFLDDLR 157
L +CS + ++ LN + N+ NN P + SA+N F D +
Sbjct: 25 LQSQCSNLLLNVSQTLNPLF--NANTNNNKPNIFSALNSFRDQAK 67
>At1g58227.1 68414.m06616 hypothetical protein
Length = 1323
Score = 29.1 bits (62), Expect = 2.9
Identities = 22/80 (27%), Positives = 39/80 (48%)
Frame = +2
Query: 17 LFLSHECSE*IKHLCNELNKILINNSGVNNEFPTMISAVNEFLDDLRGGRMSESPLVTVE 196
+FLSH C + + +L ++++L+ G FP + + +E L L G R E P + ++
Sbjct: 1241 IFLSHPCRDNVLYLLRLVDEMLVREFGSRLLFPAISTDFSEDLLQL-GNR--EDPTLGLD 1297
Query: 197 QGQLQGRIVNSPSGKAFYSF 256
+ Q + S A Y F
Sbjct: 1298 E-SFQRFLTEEISRYAVYKF 1316
>At3g52250.1 68416.m05742 myb family transcription factor contains
Pfam profile: PF00249 myb-like DNA-binding domain
Length = 1677
Score = 28.3 bits (60), Expect = 5.1
Identities = 11/26 (42%), Positives = 19/26 (73%)
Frame = +2
Query: 50 KHLCNELNKILINNSGVNNEFPTMIS 127
K+LC + + L+NN+ VN FP+++S
Sbjct: 1244 KYLCLKDDNNLVNNAYVNGGFPSLVS 1269
>At3g59610.1 68416.m06651 F-box family protein / jacalin lectin
family protein contains Pfam profile PF01419:
Jacalin-like lectin domain
Length = 521
Score = 27.9 bits (59), Expect = 6.7
Identities = 11/29 (37%), Positives = 16/29 (55%)
Frame = +2
Query: 497 KWGSGNTNLYGPDFLVDRDVVVMTINYRC 583
+W S + N Y P + VD D V +T+ C
Sbjct: 290 EWSSLSVNYYPPSYFVDEDKVGLTLVICC 318
>At1g19190.1 68414.m02389 expressed protein contains similarity to
anther-specific and pathogenesis response protein
(PrMC3) GI:5487873 from [Pinus radiata]
Length = 318
Score = 27.9 bits (59), Expect = 6.7
Identities = 26/100 (26%), Positives = 43/100 (43%), Gaps = 9/100 (9%)
Frame = +2
Query: 410 ENCLFLNVYTPS-----TDGAFLPVMIWIHGGGFKWGSGNTNLYGPDFLVD----RDVVV 562
E L L +Y P T +P++++ HGGGF + + +Y FL D +
Sbjct: 50 EKNLSLRIYLPQNSVYETGEKKIPLLVYFHGGGFIMETAFSPIY-HTFLTSAVSATDCIA 108
Query: 563 MTINYRCGALGFLSLNTPEVPGNAGIKDIVQAIRWVKDNI 682
+++ YR PE P +D AI+W+ +I
Sbjct: 109 VSVEYR---------RAPEHPIPTLYEDSWDAIQWIFTHI 139
>At1g12350.1 68414.m01427 DNA/panthothenate metabolism flavoprotein
family protein contains Pfam domain PF04127: DNA /
pantothenate metabolism flavoprotein
Length = 317
Score = 27.9 bits (59), Expect = 6.7
Identities = 16/39 (41%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Frame = +1
Query: 163 QDVRVASSHSGARAAPGTDRKQPVREG-LLQFPRNTICE 276
++++V SHSGA D++ V EG LL+ P +TI E
Sbjct: 123 KNIQVHGSHSGAVKMAVMDQQAAVAEGRLLKLPFSTIYE 161
>At1g12050.1 68414.m01391 fumarylacetoacetase, putative similar to
fumarylacetoacetase (Fumarylacetoacetate hydrolase,
Beta-diketonase, FAA)[Rattus norvegicus]
SWISS-PROT:P25093
Length = 421
Score = 27.9 bits (59), Expect = 6.7
Identities = 13/37 (35%), Positives = 20/37 (54%)
Frame = +3
Query: 294 CDLRPHNLQNPGTASGMPRRKGTCVLKSIQSSRNPMS 404
C+LRP +L GT SG C+L+ + + P+S
Sbjct: 343 CNLRPGDLLGTGTISGPEPDSYGCLLELTWNGQKPLS 379
>At5g03280.1 68418.m00277 ethylene-insensitive 2 (EIN2) identical to
EIN2 [Arabidopsis thaliana] gi|5231113|gb|AAD41076;
member of the natural resistance-associated macrophage
protein (NRAMP) metal transporter family, PMID:11500563;
metal transport capacity has not been shown,
PMID:11500563, PMID:1038174
Length = 1294
Score = 27.5 bits (58), Expect = 8.9
Identities = 22/72 (30%), Positives = 31/72 (43%)
Frame = +2
Query: 143 LDDLRGGRMSESPLVTVEQGQLQGRIVNSPSGKAFYSFQGIPYAKPPLGSLRFKAPQSPE 322
+D L G + SP V + Q+ G N+ + Y Y+ SLR AP S E
Sbjct: 758 IDSLYGLQRGSSPSPLVNRMQMLGAYGNTTNNNNAYELSERRYS-----SLR--APSSSE 810
Query: 323 PWDGIRDATAEG 358
W+ + AT G
Sbjct: 811 GWEHQQPATVHG 822
>At3g48700.1 68416.m05318 expressed protein similar to PrMC3 [Pinus
radiata] GI:5487873
Length = 329
Score = 27.5 bits (58), Expect = 8.9
Identities = 28/102 (27%), Positives = 45/102 (44%), Gaps = 11/102 (10%)
Frame = +2
Query: 410 ENCLFLNVYTPS------TDGAF-LPVMIWIHGGGFKWGSGNTNLYGPDFLV----DRDV 556
+N L L +Y P T+ + LP++++ HGGGF + + Y FL D
Sbjct: 50 DNNLSLRIYLPEKAATAETEASVKLPLLVYFHGGGFLVETAFSPTY-HTFLTAAVSASDC 108
Query: 557 VVMTINYRCGALGFLSLNTPEVPGNAGIKDIVQAIRWVKDNI 682
V ++++YR PE P D A++WV +I
Sbjct: 109 VAVSVDYR---------RAPEHPIPTSYDDSWTALKWVFSHI 141
>At3g07390.1 68416.m00881 auxin-responsive protein / auxin-induced
protein (AIR12) identical (with 7 residue gap) to
auxin-induced protein AIR12 GI:11357190 [Arabidopsis
thaliana]
Length = 273
Score = 27.5 bits (58), Expect = 8.9
Identities = 25/95 (26%), Positives = 38/95 (40%)
Frame = +2
Query: 353 EGNVCAQIDPVFAKSYVGDENCLFLNVYTPSTDGAFLPVMIWIHGGGFKWGSGNTNLYGP 532
EG + + A+S G +F V P+ GA +W GG G + +GP
Sbjct: 144 EGKLAFDFWNLRAESLSGGRIAIFTTVKVPA--GADSVNQVWQIGGNVTNGRPGVHPFGP 201
Query: 533 DFLVDRDVVVMTINYRCGALGFLSLNTPEVPGNAG 637
D L V+ T + G+ S + PG +G
Sbjct: 202 DNLGSHRVLSFTEDAAPGSAP--SPGSAPAPGTSG 234
>At2g38080.1 68415.m04674 laccase, putative / diphenol oxidase,
putative similar to diphenol oxidase [Nicotiana
tabacum][GI:1685087]
Length = 558
Score = 27.5 bits (58), Expect = 8.9
Identities = 12/43 (27%), Positives = 22/43 (51%)
Frame = -3
Query: 328 PGFWRLWGLKSQRTQWGFRIWYSLETVEGLPGRAVYDPSLELP 200
PG W + T WG ++ + +E +G P +++ P +LP
Sbjct: 515 PGVWFMHCHLEVHTTWGLKMAFLVENGKG-PNQSILPPPKDLP 556
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,209,208
Number of Sequences: 28952
Number of extensions: 427733
Number of successful extensions: 1040
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 1001
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1033
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1467502800
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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