BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= maV30137 (670 letters) Database: nematostella 59,808 sequences; 16,821,457 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SB_28977| Best HMM Match : AAA (HMM E-Value=0) 104 2e-28 SB_35613| Best HMM Match : MIT (HMM E-Value=5.1e-09) 115 4e-26 SB_56202| Best HMM Match : No HMM Matches (HMM E-Value=.) 76 3e-14 SB_40956| Best HMM Match : No HMM Matches (HMM E-Value=.) 58 6e-09 SB_45627| Best HMM Match : AAA (HMM E-Value=0) 56 2e-08 SB_9909| Best HMM Match : AAA (HMM E-Value=0) 56 3e-08 SB_14682| Best HMM Match : No HMM Matches (HMM E-Value=.) 56 3e-08 SB_3919| Best HMM Match : No HMM Matches (HMM E-Value=.) 51 1e-06 SB_48561| Best HMM Match : AAA (HMM E-Value=0) 50 1e-06 SB_33584| Best HMM Match : No HMM Matches (HMM E-Value=.) 50 2e-06 SB_33442| Best HMM Match : AAA (HMM E-Value=0) 49 4e-06 SB_3115| Best HMM Match : AAA (HMM E-Value=0) 48 9e-06 SB_55690| Best HMM Match : AAA (HMM E-Value=0) 47 1e-05 SB_7424| Best HMM Match : AAA (HMM E-Value=0) 45 5e-05 SB_35704| Best HMM Match : No HMM Matches (HMM E-Value=.) 41 0.001 SB_37200| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.001 SB_19460| Best HMM Match : AAA (HMM E-Value=0) 40 0.001 SB_732| Best HMM Match : AAA (HMM E-Value=0) 40 0.002 SB_755| Best HMM Match : MIT (HMM E-Value=0.055) 40 0.002 SB_33907| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.004 SB_17703| Best HMM Match : Mito_carr (HMM E-Value=0) 39 0.004 SB_49367| Best HMM Match : AAA (HMM E-Value=0) 38 0.010 SB_35973| Best HMM Match : zf-CCHC (HMM E-Value=0.0026) 36 0.023 SB_31892| Best HMM Match : AAA (HMM E-Value=6.2e-25) 36 0.039 SB_46732| Best HMM Match : AAA (HMM E-Value=0.044) 32 0.37 SB_11360| Best HMM Match : PDZ (HMM E-Value=0) 30 1.5 SB_36623| Best HMM Match : NACHT (HMM E-Value=0.26) 30 2.0 SB_11352| Best HMM Match : LRR_1 (HMM E-Value=0.0019) 30 2.0 SB_9084| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.4 SB_39546| Best HMM Match : FCH (HMM E-Value=8e-13) 29 3.4 SB_26266| Best HMM Match : Pkinase_Tyr (HMM E-Value=0) 29 3.4 SB_25516| Best HMM Match : AAA_2 (HMM E-Value=0) 29 4.5 SB_30385| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.5 SB_24598| Best HMM Match : Protamine_3 (HMM E-Value=1.4) 28 6.0 SB_13937| Best HMM Match : zf-CCCH (HMM E-Value=0.0017) 28 6.0 SB_47424| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.9 SB_26897| Best HMM Match : AAA (HMM E-Value=4.2e-12) 28 7.9 SB_16171| Best HMM Match : PLAT (HMM E-Value=8e-22) 28 7.9 SB_16091| Best HMM Match : 7tm_1 (HMM E-Value=9.5e-08) 28 7.9 SB_3368| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.9 SB_31804| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.9 SB_15952| Best HMM Match : TPR_1 (HMM E-Value=5.8e-11) 28 7.9 SB_10418| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.9 >SB_28977| Best HMM Match : AAA (HMM E-Value=0) Length = 442 Score = 104 bits (249), Expect(2) = 2e-28 Identities = 57/128 (44%), Positives = 67/128 (52%), Gaps = 5/128 (3%) Frame = +3 Query: 240 YEAQGERAKESIRAKCLQYLDRAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 419 YEAQG++AKESIR+KC QYLDRA Sbjct: 10 YEAQGDKAKESIRSKCFQYLDRAEKLKTYLRQKDKKKPVKAGGSSSTKTGGGKDDDDEDS 69 Query: 420 XXXX-----LQGKLEGAIVVEKPHVKWSDVAGXXXXXXXXXXXVILPIKFPHLFTGKRIP 584 L+G+L AIV+EKP+VKWSD+AG VILPIKFPHLFTGKR P Sbjct: 70 DSDNAESKKLKGQLNSAIVMEKPNVKWSDIAGLESAKEALKEAVILPIKFPHLFTGKRTP 129 Query: 585 WKGILLFG 608 W+GILL+G Sbjct: 130 WRGILLYG 137 Score = 39.5 bits (88), Expect(2) = 2e-28 Identities = 18/18 (100%), Positives = 18/18 (100%) Frame = +3 Query: 615 GTGKSYLAKAVATEANNS 668 GTGKSYLAKAVATEANNS Sbjct: 175 GTGKSYLAKAVATEANNS 192 >SB_35613| Best HMM Match : MIT (HMM E-Value=5.1e-09) Length = 86 Score = 115 bits (276), Expect = 4e-26 Identities = 52/60 (86%), Positives = 57/60 (95%) Frame = +3 Query: 129 KAIDLVTKATEEDKNKNYEEALRLYEHGVEYFLHAVKYEAQGERAKESIRAKCLQYLDRA 308 KAIDLVTKATEEDK NYEEAL+LYEHGVEYFLHA+KYEAQG++AKESIR+KC QYLDRA Sbjct: 1 KAIDLVTKATEEDKAGNYEEALKLYEHGVEYFLHAIKYEAQGDKAKESIRSKCFQYLDRA 60 >SB_56202| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 518 Score = 75.8 bits (178), Expect = 3e-14 Identities = 34/75 (45%), Positives = 46/75 (61%) Frame = +3 Query: 444 LEGAIVVEKPHVKWSDVAGXXXXXXXXXXXVILPIKFPHLFTGKRIPWKGILLFGPPGTG 623 LE I+ + P+V W+D+A V+LP+ P F G R PW+G+L+ GPPGTG Sbjct: 236 LERDILQKNPNVHWADIADLHEAKKLLEEAVVLPLLMPDYFQGIRRPWRGVLMVGPPGTG 295 Query: 624 KSYLAKAVATEANNS 668 K+ LAKAVATE + Sbjct: 296 KTMLAKAVATECGTT 310 >SB_40956| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 1086 Score = 58.0 bits (134), Expect = 6e-09 Identities = 32/78 (41%), Positives = 41/78 (52%), Gaps = 1/78 (1%) Frame = +3 Query: 432 LQGKLEGAIVVEK-PHVKWSDVAGXXXXXXXXXXXVILPIKFPHLFTGKRIPWKGILLFG 608 LQ AI K P + W DV G + LP+ P LF + G+LL+G Sbjct: 793 LQASHADAIGAPKIPDISWKDVGGLDSVKEEILDTIQLPLLHPELFAAG-LRRSGVLLYG 851 Query: 609 PPGTGKSYLAKAVATEAN 662 PPGTGK+ +AKAVATE + Sbjct: 852 PPGTGKTLMAKAVATECS 869 >SB_45627| Best HMM Match : AAA (HMM E-Value=0) Length = 628 Score = 56.4 bits (130), Expect = 2e-08 Identities = 28/67 (41%), Positives = 37/67 (55%), Gaps = 1/67 (1%) Frame = +3 Query: 459 VVEKPHVKWSDVAGXXXXXXXXXXXVILPIKFPHLFTGKRI-PWKGILLFGPPGTGKSYL 635 VVE P+V W D+ G V P++ P F + P KG+L +GPPG GK+ L Sbjct: 301 VVEVPNVSWDDIGGLEGVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLL 360 Query: 636 AKAVATE 656 AKA+A E Sbjct: 361 AKAIANE 367 >SB_9909| Best HMM Match : AAA (HMM E-Value=0) Length = 400 Score = 55.6 bits (128), Expect = 3e-08 Identities = 30/69 (43%), Positives = 37/69 (53%), Gaps = 1/69 (1%) Frame = +3 Query: 459 VVEKPHVKWSDVAGXXXXXXXXXXXVILPIKFPHLFTGKRI-PWKGILLFGPPGTGKSYL 635 V EKP V +SD+ G V P+ P F I P KG+LLFGPPGTGK+ Sbjct: 75 VEEKPDVTYSDIGGCKEQIDKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLC 134 Query: 636 AKAVATEAN 662 A+AVA + Sbjct: 135 ARAVANRTD 143 >SB_14682| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 802 Score = 55.6 bits (128), Expect = 3e-08 Identities = 28/69 (40%), Positives = 39/69 (56%), Gaps = 1/69 (1%) Frame = +3 Query: 456 IVVEKPHVKWSDVAGXXXXXXXXXXXVILPIKFPHLFTGKRI-PWKGILLFGPPGTGKSY 632 + +E P V WSDV G V P+K P F I P +GIL++GPPG K+ Sbjct: 527 VALEVPKVHWSDVGGNEMIKRKLKEAVEWPLKHPEAFQRLGIRPPRGILMYGPPGCSKTL 586 Query: 633 LAKAVATEA 659 +A+A+ATE+ Sbjct: 587 IARALATES 595 Score = 47.2 bits (107), Expect = 1e-05 Identities = 24/64 (37%), Positives = 35/64 (54%), Gaps = 1/64 (1%) Frame = +3 Query: 468 KPHVKWSDVAGXXXXXXXXXXXVILPIKFPHLFTGKRIPW-KGILLFGPPGTGKSYLAKA 644 K V + + G + +P+ P LFT +P +GILL+GP GTGK+ +A+A Sbjct: 250 KKGVSFQSIGGLKTQIQAVREMIEMPLTNPELFTAYGVPPPRGILLYGPSGTGKTMIARA 309 Query: 645 VATE 656 VA E Sbjct: 310 VANE 313 >SB_3919| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 442 Score = 50.8 bits (116), Expect = 1e-06 Identities = 30/71 (42%), Positives = 39/71 (54%), Gaps = 2/71 (2%) Frame = +3 Query: 444 LEGAIVVEK-PHVKWSDVAGXXXXXXXXXXXVILPIKFPHLFTGKRIPW-KGILLFGPPG 617 L ++VEK P + V G + LP+K P LF I KG+LL+GPPG Sbjct: 162 LVSLMMVEKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFEALGIDQPKGVLLYGPPG 221 Query: 618 TGKSYLAKAVA 650 TGK+ LA+AVA Sbjct: 222 TGKTLLARAVA 232 >SB_48561| Best HMM Match : AAA (HMM E-Value=0) Length = 2021 Score = 50.4 bits (115), Expect = 1e-06 Identities = 23/63 (36%), Positives = 37/63 (58%), Gaps = 1/63 (1%) Frame = +3 Query: 477 VKWSDVAGXXXXXXXXXXXVILPIKFPHLFTGKRI-PWKGILLFGPPGTGKSYLAKAVAT 653 VK+ V G ++ P+ +P +F +I P +G+L FGPPGTGK+ +A+A+A Sbjct: 881 VKFDSVGGLNKQIQALKEMILFPLVYPEVFDKFKITPPRGVLFFGPPGTGKTLVARALAN 940 Query: 654 EAN 662 E + Sbjct: 941 ECS 943 >SB_33584| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 455 Score = 49.6 bits (113), Expect = 2e-06 Identities = 25/65 (38%), Positives = 36/65 (55%), Gaps = 1/65 (1%) Frame = +3 Query: 471 PHVKWSDVAGXXXXXXXXXXXVILPIKFPHLFTGKRI-PWKGILLFGPPGTGKSYLAKAV 647 P ++D+ G V LP+ P L+ I P KG++L+G PGTGK+ LAKAV Sbjct: 375 PQESYADIGGLDTQIQEIKESVELPLTHPELYEEMGIKPPKGVILYGQPGTGKTLLAKAV 434 Query: 648 ATEAN 662 A + + Sbjct: 435 ANQTS 439 >SB_33442| Best HMM Match : AAA (HMM E-Value=0) Length = 369 Score = 48.8 bits (111), Expect = 4e-06 Identities = 26/63 (41%), Positives = 37/63 (58%), Gaps = 1/63 (1%) Frame = +3 Query: 465 EKPHVKWSDVAGXXXXXXXXXXXVILPIKFPHLFTGKRI-PWKGILLFGPPGTGKSYLAK 641 EKP+V ++++ G V LP+ L+ I P +G+LL+GPPG GK+ LAK Sbjct: 157 EKPNVSYAEIGGMDIQKQEIREAVELPLTHFELYKQIGIDPPRGVLLYGPPGCGKTMLAK 216 Query: 642 AVA 650 AVA Sbjct: 217 AVA 219 >SB_3115| Best HMM Match : AAA (HMM E-Value=0) Length = 913 Score = 47.6 bits (108), Expect = 9e-06 Identities = 31/70 (44%), Positives = 40/70 (57%), Gaps = 2/70 (2%) Frame = +3 Query: 459 VVEKPHVKWSDVAGXXXXXXXXXXXVILPIKFPHLFT--GKRIPWKGILLFGPPGTGKSY 632 + +K ++ DVAG V +K +T G +IP KG LL GPPGTGK+ Sbjct: 116 IFDKGSARFKDVAGMQEAKMEVMEFVDY-LKSAGRYTQLGAKIP-KGALLVGPPGTGKTL 173 Query: 633 LAKAVATEAN 662 LAKAVATEA+ Sbjct: 174 LAKAVATEAD 183 >SB_55690| Best HMM Match : AAA (HMM E-Value=0) Length = 1031 Score = 47.2 bits (107), Expect = 1e-05 Identities = 26/72 (36%), Positives = 37/72 (51%), Gaps = 1/72 (1%) Frame = +3 Query: 444 LEGAIVVEKPHVKWSDVAGXXXXXXXXXXXVILPIKFPHLFTGKRIPWKG-ILLFGPPGT 620 L G + + H+ W +V G ++ P KF LF + +G +LL+GPPGT Sbjct: 653 LRGVPLHQAGHLGWENVGGLGPVKGVLQETLLWPSKFAGLFAKCPLRLRGGLLLYGPPGT 712 Query: 621 GKSYLAKAVATE 656 GK+ LA VA E Sbjct: 713 GKTLLAGVVAKE 724 >SB_7424| Best HMM Match : AAA (HMM E-Value=0) Length = 294 Score = 45.2 bits (102), Expect = 5e-05 Identities = 29/62 (46%), Positives = 35/62 (56%), Gaps = 2/62 (3%) Frame = +3 Query: 480 KWSDVAGXXXXXXXXXXXVILPIKFPHLF--TGKRIPWKGILLFGPPGTGKSYLAKAVAT 653 +W DVAG V +K P + G +IP KG +L GPPGTGK+ LAKAVA Sbjct: 46 EWIDVAGCEEAKLEIMEFVNF-LKNPQQYHELGAKIP-KGAILSGPPGTGKTLLAKAVAG 103 Query: 654 EA 659 EA Sbjct: 104 EA 105 >SB_35704| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 256 Score = 40.7 bits (91), Expect = 0.001 Identities = 23/39 (58%), Positives = 27/39 (69%) Frame = +3 Query: 543 PIKFPHLFTGKRIPWKGILLFGPPGTGKSYLAKAVATEA 659 P KF L G ++P G+LL G PGTGK+ LAKAVA EA Sbjct: 153 PEKFKRL--GGKLP-TGVLLIGSPGTGKTLLAKAVAGEA 188 >SB_37200| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 908 Score = 40.3 bits (90), Expect = 0.001 Identities = 23/70 (32%), Positives = 33/70 (47%), Gaps = 2/70 (2%) Frame = +3 Query: 459 VVEKPHVKWSDVAGXXXXXXXXXXXVILPIKFPHLFT--GKRIPWKGILLFGPPGTGKSY 632 VV +W DV G + P+ P F G R P +G+LL+GPPG K+ Sbjct: 475 VVRLQPTRWDDVGGLEGVKQALRQAIEWPLLHPEAFARMGLRRP-RGVLLYGPPGCCKTT 533 Query: 633 LAKAVATEAN 662 L +A A+ + Sbjct: 534 LVRAAASSTH 543 Score = 28.7 bits (61), Expect = 4.5 Identities = 16/35 (45%), Positives = 20/35 (57%), Gaps = 1/35 (2%) Frame = +3 Query: 534 VILPIKFPHLFTGKRIPW-KGILLFGPPGTGKSYL 635 V P+ +P F+ I KGILL G PG GK+ L Sbjct: 227 VQFPLYYPESFSHLGINGPKGILLVGAPGVGKTLL 261 >SB_19460| Best HMM Match : AAA (HMM E-Value=0) Length = 340 Score = 40.3 bits (90), Expect = 0.001 Identities = 23/70 (32%), Positives = 33/70 (47%), Gaps = 2/70 (2%) Frame = +3 Query: 459 VVEKPHVKWSDVAGXXXXXXXXXXXVILPIKFPHLFT--GKRIPWKGILLFGPPGTGKSY 632 VV +W DV G + P+ P F G R P +G+LL+GPPG K+ Sbjct: 4 VVRLQPTRWDDVGGLEGVKQALRQAIEWPLLHPEAFARMGLRRP-RGVLLYGPPGCCKTT 62 Query: 633 LAKAVATEAN 662 L +A A+ + Sbjct: 63 LVRAAASSTH 72 >SB_732| Best HMM Match : AAA (HMM E-Value=0) Length = 388 Score = 39.9 bits (89), Expect = 0.002 Identities = 16/25 (64%), Positives = 20/25 (80%) Frame = +3 Query: 588 KGILLFGPPGTGKSYLAKAVATEAN 662 KGILLFGPPGTGK+ +A+ + T N Sbjct: 183 KGILLFGPPGTGKTLMARQIGTMLN 207 >SB_755| Best HMM Match : MIT (HMM E-Value=0.055) Length = 146 Score = 39.5 bits (88), Expect = 0.002 Identities = 21/63 (33%), Positives = 33/63 (52%) Frame = +3 Query: 120 TLQKAIDLVTKATEEDKNKNYEEALRLYEHGVEYFLHAVKYEAQGERAKESIRAKCLQYL 299 +L+ AI ++ +A E D+ K+Y EAL Y+ G+ L VK E K + + Y Sbjct: 2 SLEAAISVLKRAVELDEGKSYSEALVCYQEGIGLLLQVVK-STTNEITKTRYKEQLNSYF 60 Query: 300 DRA 308 +RA Sbjct: 61 ERA 63 >SB_33907| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 56 Score = 38.7 bits (86), Expect = 0.004 Identities = 19/40 (47%), Positives = 26/40 (65%), Gaps = 1/40 (2%) Frame = +3 Query: 543 PIKFPHLFTGKRIPWK-GILLFGPPGTGKSYLAKAVATEA 659 P++ P F+ + GILL GPPG GK+ LAKA+A E+ Sbjct: 2 PVQHPEEFSALGLTHPPGILLAGPPGCGKTLLAKAIANES 41 >SB_17703| Best HMM Match : Mito_carr (HMM E-Value=0) Length = 611 Score = 38.7 bits (86), Expect = 0.004 Identities = 19/40 (47%), Positives = 26/40 (65%), Gaps = 1/40 (2%) Frame = +3 Query: 543 PIKFPHLFTGKRIPWK-GILLFGPPGTGKSYLAKAVATEA 659 P++ P F+ + GILL GPPG GK+ LAKA+A E+ Sbjct: 2 PVQHPEEFSALGLTHPPGILLAGPPGCGKTLLAKAIANES 41 >SB_49367| Best HMM Match : AAA (HMM E-Value=0) Length = 976 Score = 37.5 bits (83), Expect = 0.010 Identities = 22/61 (36%), Positives = 33/61 (54%), Gaps = 1/61 (1%) Frame = +3 Query: 477 VKWSDVAGXXXXXXXXXXXVILPIKFPHLFTGKRI-PWKGILLFGPPGTGKSYLAKAVAT 653 VK++D+ G +++ + P +FT + P G LL GPPG GK+ LA A+A Sbjct: 674 VKFADIGGCSNTLEQVGK-LLVHMCHPEVFTTLGVTPTTGFLLHGPPGCGKTLLAHAIAG 732 Query: 654 E 656 E Sbjct: 733 E 733 >SB_35973| Best HMM Match : zf-CCHC (HMM E-Value=0.0026) Length = 779 Score = 36.3 bits (80), Expect = 0.023 Identities = 20/49 (40%), Positives = 25/49 (51%), Gaps = 1/49 (2%) Frame = +3 Query: 474 HVKWSDVAGXXXXXXXXXXXVILPIKFPHLFTGKRI-PWKGILLFGPPG 617 ++ +SDV G + LP+ P LF I P KG LLFGPPG Sbjct: 131 NISYSDVGGLSEQIRELREVIELPLTNPELFQRVGIAPPKGCLLFGPPG 179 >SB_31892| Best HMM Match : AAA (HMM E-Value=6.2e-25) Length = 420 Score = 35.5 bits (78), Expect = 0.039 Identities = 17/39 (43%), Positives = 25/39 (64%), Gaps = 1/39 (2%) Frame = +3 Query: 555 PHLFTGKRIPWK-GILLFGPPGTGKSYLAKAVATEANNS 668 P + + IP++ G LL+GPPG GKS +A+A E + S Sbjct: 211 PRWYMDRGIPYRRGYLLYGPPGCGKSSFIQALAGELDYS 249 >SB_46732| Best HMM Match : AAA (HMM E-Value=0.044) Length = 430 Score = 32.3 bits (70), Expect = 0.37 Identities = 11/22 (50%), Positives = 18/22 (81%) Frame = +3 Query: 585 WKGILLFGPPGTGKSYLAKAVA 650 ++ +L +GPPGTGK+ AK++A Sbjct: 329 YRNLLFYGPPGTGKTMFAKSLA 350 >SB_11360| Best HMM Match : PDZ (HMM E-Value=0) Length = 625 Score = 30.3 bits (65), Expect = 1.5 Identities = 18/56 (32%), Positives = 29/56 (51%), Gaps = 3/56 (5%) Frame = +3 Query: 120 TLQKAIDLVTKATEEDKNKNYEEALRLYEHGVEYFLHAVK---YEAQGERAKESIR 278 +++ +L + TEE K ++ AL+L + EYF V+ Y+ R KE IR Sbjct: 555 SMESIRELNKRLTEEQAQKTFDRALKLEQEFGEYFTAIVQGDTYDELYNRVKEVIR 610 >SB_36623| Best HMM Match : NACHT (HMM E-Value=0.26) Length = 420 Score = 29.9 bits (64), Expect = 2.0 Identities = 10/33 (30%), Positives = 20/33 (60%) Frame = -3 Query: 110 CHCFLNSPQLWCKKLLSCIFDAIIRCYYYKKTR 12 CHC L+SP ++ I+ ++ +++K+TR Sbjct: 155 CHCLLHSPDPVLPVKITEIYSIFVKIFFHKRTR 187 >SB_11352| Best HMM Match : LRR_1 (HMM E-Value=0.0019) Length = 507 Score = 29.9 bits (64), Expect = 2.0 Identities = 10/33 (30%), Positives = 20/33 (60%) Frame = -3 Query: 110 CHCFLNSPQLWCKKLLSCIFDAIIRCYYYKKTR 12 CHC L+SP ++ I+ ++ +++K+TR Sbjct: 93 CHCLLHSPDPVLPVKITEIYSIFVKIFFHKRTR 125 >SB_9084| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 166 Score = 29.1 bits (62), Expect = 3.4 Identities = 9/17 (52%), Positives = 12/17 (70%) Frame = -2 Query: 417 DHQNHCHYHSSYHHFWI 367 DHQ+H H+H +HH I Sbjct: 30 DHQHHDHHHHDHHHMTI 46 >SB_39546| Best HMM Match : FCH (HMM E-Value=8e-13) Length = 360 Score = 29.1 bits (62), Expect = 3.4 Identities = 16/56 (28%), Positives = 28/56 (50%) Frame = +3 Query: 132 AIDLVTKATEEDKNKNYEEALRLYEHGVEYFLHAVKYEAQGERAKESIRAKCLQYL 299 A+DL++K+ E E+ ++L EH +Y +K E + A I + Q+L Sbjct: 11 AVDLLSKSGHEAILTQNEQEIKLLEHIRQYMGKRIKAELEYASALSKINSTASQFL 66 >SB_26266| Best HMM Match : Pkinase_Tyr (HMM E-Value=0) Length = 1038 Score = 29.1 bits (62), Expect = 3.4 Identities = 16/56 (28%), Positives = 28/56 (50%) Frame = +3 Query: 132 AIDLVTKATEEDKNKNYEEALRLYEHGVEYFLHAVKYEAQGERAKESIRAKCLQYL 299 A+DL++K+ E E+ ++L EH +Y +K E + A I + Q+L Sbjct: 11 AVDLLSKSGHEAILTQNEQEIKLLEHIRQYMGKRIKAELEYASALSKINSTASQFL 66 >SB_25516| Best HMM Match : AAA_2 (HMM E-Value=0) Length = 609 Score = 28.7 bits (61), Expect = 4.5 Identities = 12/25 (48%), Positives = 17/25 (68%) Frame = +3 Query: 576 RIPWKGILLFGPPGTGKSYLAKAVA 650 R+ ILL GP G+GK+ LA+ +A Sbjct: 267 RLDKSNILLLGPTGSGKTLLAQTIA 291 >SB_30385| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 131 Score = 28.7 bits (61), Expect = 4.5 Identities = 16/35 (45%), Positives = 20/35 (57%), Gaps = 1/35 (2%) Frame = +3 Query: 534 VILPIKFPHLFTGKRIPW-KGILLFGPPGTGKSYL 635 V P+ +P F+ I KGILL G PG GK+ L Sbjct: 57 VQFPLYYPESFSHLGINGPKGILLVGAPGVGKTLL 91 >SB_24598| Best HMM Match : Protamine_3 (HMM E-Value=1.4) Length = 407 Score = 28.3 bits (60), Expect = 6.0 Identities = 14/27 (51%), Positives = 16/27 (59%) Frame = +3 Query: 153 ATEEDKNKNYEEALRLYEHGVEYFLHA 233 A +E K Y EAL + HGVEY L A Sbjct: 124 ALDEIKRTPYPEALSMKYHGVEYCLDA 150 >SB_13937| Best HMM Match : zf-CCCH (HMM E-Value=0.0017) Length = 1495 Score = 28.3 bits (60), Expect = 6.0 Identities = 10/18 (55%), Positives = 16/18 (88%) Frame = +3 Query: 594 ILLFGPPGTGKSYLAKAV 647 I+L GPPG+GK+++AK + Sbjct: 1252 IILRGPPGSGKTHVAKLI 1269 >SB_47424| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 177 Score = 27.9 bits (59), Expect = 7.9 Identities = 8/21 (38%), Positives = 14/21 (66%) Frame = -2 Query: 411 QNHCHYHSSYHHFWIPHPLLV 349 ++HCH+H HH + H +L+ Sbjct: 131 KHHCHHHHHQHHHHLFHIILI 151 >SB_26897| Best HMM Match : AAA (HMM E-Value=4.2e-12) Length = 230 Score = 27.9 bits (59), Expect = 7.9 Identities = 11/21 (52%), Positives = 15/21 (71%) Frame = +3 Query: 594 ILLFGPPGTGKSYLAKAVATE 656 +L +GPPGTGK+ AVA + Sbjct: 13 LLFYGPPGTGKTSTILAVAKQ 33 >SB_16171| Best HMM Match : PLAT (HMM E-Value=8e-22) Length = 407 Score = 27.9 bits (59), Expect = 7.9 Identities = 10/28 (35%), Positives = 18/28 (64%) Frame = +2 Query: 518 SIERGCNSTNKISTFVYWQENTMEGHLI 601 S+ RG +T+K+S +Y +EN E ++ Sbjct: 214 SMRRGAGTTSKVSMIMYGEENETEARVL 241 >SB_16091| Best HMM Match : 7tm_1 (HMM E-Value=9.5e-08) Length = 839 Score = 27.9 bits (59), Expect = 7.9 Identities = 9/18 (50%), Positives = 9/18 (50%) Frame = -2 Query: 414 HQNHCHYHSSYHHFWIPH 361 H H H H YHH PH Sbjct: 575 HHRHHHRHHHYHHHHYPH 592 >SB_3368| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 477 Score = 27.9 bits (59), Expect = 7.9 Identities = 17/43 (39%), Positives = 20/43 (46%), Gaps = 5/43 (11%) Frame = -2 Query: 273 CFLLPFHLGPH--ILL---HEENTLHRAHINVMLLHSSCSCPL 160 C LP H GPH ILL H LH V + + +CPL Sbjct: 376 CLSLPPHTGPHSVILLGIPHGTGQLHITGYTVTVFGTDSTCPL 418 >SB_31804| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 2047 Score = 27.9 bits (59), Expect = 7.9 Identities = 10/28 (35%), Positives = 21/28 (75%), Gaps = 1/28 (3%) Frame = +3 Query: 588 KGILLFGPPGTGK-SYLAKAVATEANNS 668 KG+++ G PG+GK S++A + ++ +N+ Sbjct: 439 KGVIITGDPGSGKSSFVANIICSQLSNN 466 >SB_15952| Best HMM Match : TPR_1 (HMM E-Value=5.8e-11) Length = 672 Score = 27.9 bits (59), Expect = 7.9 Identities = 12/27 (44%), Positives = 18/27 (66%) Frame = +3 Query: 126 QKAIDLVTKATEEDKNKNYEEALRLYE 206 ++A+D+ K +ED YE ALR+YE Sbjct: 582 KRALDIRLKNKQEDAIALYERALRIYE 608 >SB_10418| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 477 Score = 27.9 bits (59), Expect = 7.9 Identities = 13/24 (54%), Positives = 15/24 (62%) Frame = +3 Query: 588 KGILLFGPPGTGKSYLAKAVATEA 659 K LL GPPG GK+ LA +A A Sbjct: 381 KVALLCGPPGLGKTTLAHVIAQHA 404 Database: nematostella Posted date: Oct 22, 2007 1:22 PM Number of letters in database: 16,821,457 Number of sequences in database: 59,808 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 17,358,830 Number of Sequences: 59808 Number of extensions: 297091 Number of successful extensions: 1196 Number of sequences better than 10.0: 43 Number of HSP's better than 10.0 without gapping: 901 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1172 length of database: 16,821,457 effective HSP length: 79 effective length of database: 12,096,625 effective search space used: 1729817375 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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