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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30137
         (670 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At2g27600.1 68415.m03346 AAA-type ATPase family protein / vacuol...   127   8e-30
At2g34560.2 68415.m04246 katanin, putative similar to katanin p6...    83   1e-16
At2g34560.1 68415.m04245 katanin, putative similar to katanin p6...    83   1e-16
At1g80350.1 68414.m09406 katanin 1 (KTN1) identical to katanin 1...    82   4e-16
At2g45500.1 68415.m05659 AAA-type ATPase family protein similar ...    75   6e-14
At3g27120.1 68416.m03393 spastin ATPase, putative similar to SWI...    69   3e-12
At3g19740.1 68416.m02499 AAA-type ATPase family protein contains...    63   2e-10
At1g64110.2 68414.m07264 AAA-type ATPase family protein contains...    63   2e-10
At1g64110.1 68414.m07263 AAA-type ATPase family protein contains...    63   2e-10
At1g50140.1 68414.m05623 AAA-type ATPase family protein contains...    61   7e-10
At1g03000.1 68414.m00271 AAA-type ATPase family protein contains...    60   1e-09
At1g02890.1 68414.m00256 AAA-type ATPase family protein contains...    60   1e-09
At4g02480.1 68417.m00335 AAA-type ATPase family protein contains...    59   3e-09
At5g53540.1 68418.m06653 MSP1 protein, putative / intramitochond...    58   5e-09
At4g28000.1 68417.m04016 AAA-type ATPase family protein contains...    58   5e-09
At4g27680.1 68417.m03980 MSP1 protein, putative / intramitochond...    58   5e-09
At3g09840.1 68416.m01174 cell division cycle protein 48 (CDC48A)...    57   9e-09
At5g03340.1 68418.m00286 cell division cycle protein 48, putativ...    57   1e-08
At3g53230.1 68416.m05865 cell division cycle protein 48, putativ...    57   1e-08
At4g24860.1 68417.m03559 AAA-type ATPase family protein contains...    56   2e-08
At3g01610.1 68416.m00092 AAA-type ATPase family protein contains...    54   7e-08
At1g53750.1 68414.m06115 26S proteasome AAA-ATPase subunit (RPT1...    54   7e-08
At1g62130.1 68414.m07010 AAA-type ATPase family protein contains...    54   9e-08
At5g58290.1 68418.m07297 26S proteasome AAA-ATPase subunit (RPT3...    53   2e-07
At2g03670.1 68415.m00326 AAA-type ATPase family protein contains...    52   3e-07
At1g09100.1 68414.m01016 26S protease regulatory subunit 6A, put...    52   5e-07
At3g56690.1 68416.m06306 calmodulin-binding protein identical to...    51   6e-07
At3g05530.1 68416.m00606 26S proteasome AAA-ATPase subunit (RPT5...    51   6e-07
At1g53780.1 68414.m06120 26S proteasome AAA-ATPase subunit, puta...    50   1e-06
At1g06430.1 68414.m00680 FtsH protease, putative similar to zinc...    50   1e-06
At5g20000.1 68418.m02380 26S proteasome AAA-ATPase subunit, puta...    50   2e-06
At5g19990.1 68418.m02379 26S proteasome AAA-ATPase subunit (RPT6a)     50   2e-06
At2g30950.1 68415.m03775 FtsH protease (VAR2) identical to zinc ...    49   2e-06
At1g08270.1 68414.m00913 expressed protein low similarity to SP|...    49   2e-06
At5g43010.1 68418.m05245 26S proteasome AAA-ATPase subunit (RPT4...    49   3e-06
At1g45000.1 68414.m05158 26S proteasome regulatory complex subun...    49   3e-06
At4g29040.1 68417.m04153 26S proteasome AAA-ATPase subunit (RPT2...    48   4e-06
At2g20140.1 68415.m02353 26S protease regulatory complex subunit...    48   4e-06
At1g05910.1 68414.m00620 cell division cycle protein 48-related ...    48   7e-06
At5g15250.1 68418.m01786 FtsH protease, putative similar to FtsH...    47   1e-05
At1g08270.2 68414.m00912 expressed protein low similarity to SP|...    47   1e-05
At1g50250.1 68414.m05634 cell division protein ftsH homolog 1, c...    46   2e-05
At5g42270.1 68418.m05145 FtsH protease, putative similar to FtsH...    45   4e-05
At2g26140.1 68415.m03137 FtsH protease, putative contains simila...    45   4e-05
At5g53170.1 68418.m06610 FtsH protease, putative similar to ATP-...    44   1e-04
At5g64580.1 68418.m08116 AAA-type ATPase family protein similar ...    43   2e-04
At3g02450.1 68416.m00232 cell division protein ftsH, putative si...    43   2e-04
At5g08470.1 68418.m00999 peroxisome biogenesis protein (PEX1) id...    43   2e-04
At4g23940.1 68417.m03443 FtsH protease, putative contains simila...    43   2e-04
At3g15120.1 68416.m01913 AAA-type ATPase family protein contains...    42   4e-04
At2g29080.1 68415.m03535 FtsH protease, putative similar to AAA-...    41   6e-04
At1g07510.1 68414.m00804 FtsH protease, putative similar to AAA-...    41   6e-04
At3g16290.1 68416.m02056 FtsH protease, putative contains simila...    40   0.001
At3g28520.1 68416.m03562 AAA-type ATPase family protein contains...    39   0.003
At3g47060.1 68416.m05110 FtsH protease, putative contains simila...    39   0.003
At3g28510.1 68416.m03561 AAA-type ATPase family protein contains...    39   0.003
At3g28540.1 68416.m03564 AAA-type ATPase family protein contains...    38   0.005
At5g58870.1 68418.m07376 FtsH protease, putative contains simila...    38   0.006
At5g17730.1 68418.m02079 AAA-type ATPase family protein contains...    38   0.008
At4g05380.1 68417.m00820 AAA-type ATPase family protein contains...    38   0.008
At3g50940.1 68416.m05577 AAA-type ATPase family protein contains...    38   0.008
At3g50930.1 68416.m05576 AAA-type ATPase family protein contains...    37   0.014
At4g04910.1 68417.m00714 AAA-type ATPase family protein similar ...    36   0.018
At3g28610.1 68416.m03571 AAA-type ATPase family protein contains...    36   0.032
At5g40010.1 68418.m04852 AAA-type ATPase family protein contains...    35   0.043
At5g40000.1 68418.m04851 AAA-type ATPase family protein BCS1 nuc...    35   0.043
At5g17760.2 68418.m02083 AAA-type ATPase family protein contains...    35   0.043
At5g17760.1 68418.m02082 AAA-type ATPase family protein contains...    35   0.043
At5g17740.1 68418.m02080 AAA-type ATPase family protein h-bcs1, ...    35   0.043
At3g28600.1 68416.m03570 AAA-type ATPase family protein contains...    35   0.043
At3g28580.1 68416.m03568 AAA-type ATPase family protein contains...    35   0.043
At1g43910.1 68414.m05066 AAA-type ATPase family protein contains...    35   0.043
At4g30250.1 68417.m04301 AAA-type ATPase family protein contains...    35   0.056
At2g18193.1 68415.m02117 AAA-type ATPase family protein contains...    35   0.056
At2g18190.1 68415.m02116 AAA-type ATPase family protein contains...    35   0.056
At1g79560.1 68414.m09275 FtsH protease, putative contains simila...    34   0.074
At5g57480.1 68418.m07183 AAA-type ATPase family protein contains...    34   0.098
At4g25835.1 68417.m03716 AAA-type ATPase family protein contains...    34   0.098
At3g28570.1 68416.m03567 AAA-type ATPase family protein contains...    34   0.098
At5g22330.1 68418.m02605 TATA box-binding protein-interacting pr...    33   0.13 
At3g03060.1 68416.m00302 AAA-type ATPase family protein contains...    33   0.13 
At2g18330.1 68415.m02136 AAA-type ATPase family protein contains...    33   0.13 
At5g16930.1 68418.m01984 AAA-type ATPase family protein contains...    33   0.17 
At4g36580.1 68417.m05193 AAA-type ATPase family protein contains...    33   0.17 
At4g24710.1 68417.m03536 AAA-type ATPase family protein similar ...    33   0.17 
At3g04340.1 68416.m00459 FtsH protease family protein similar to...    33   0.23 
At4g04180.1 68417.m00593 AAA-type ATPase family protein contains...    32   0.40 
At5g17750.1 68418.m02081 AAA-type ATPase family protein contains...    31   0.69 
At1g67120.1 68414.m07636 midasin-related similar to Midasin (MID...    31   0.92 
At3g30842.1 68416.m03968 ABC transporter protein, putative simil...    30   1.6  
At2g29940.1 68415.m03642 ABC transporter family protein similar ...    30   1.6  
At2g37280.1 68415.m04573 ABC transporter family protein similar ...    29   2.1  
At2g19120.1 68415.m02232 tRNA-splicing endonuclease positive eff...    29   2.1  
At5g53350.1 68418.m06630 ATP-dependent Clp protease ATP-binding ...    29   2.8  
At1g77470.1 68414.m09021 replication factor C 36 kDA, putative s...    29   2.8  
At1g24290.1 68414.m03065 AAA-type ATPase family protein similar ...    29   2.8  
At5g61510.1 68418.m07718 NADP-dependent oxidoreductase, putative...    29   3.7  
At5g49840.1 68418.m06172 ATP-dependent Clp protease ATP-binding ...    29   3.7  
At1g33360.1 68414.m04129 ATP-dependent Clp protease ATP-binding ...    29   3.7  
At1g21690.2 68414.m02715 replication factor C 37 kDa, putative S...    29   3.7  
At1g21690.1 68414.m02714 replication factor C 37 kDa, putative S...    29   3.7  
At4g30100.1 68417.m04280 tRNA-splicing endonuclease positive eff...    28   4.9  
At5g62760.2 68418.m07879 nuclear protein ZAP-related similar to ...    28   6.5  
At5g62760.1 68418.m07878 nuclear protein ZAP-related similar to ...    28   6.5  
At4g15230.1 68417.m02333 ABC transporter family protein similar ...    28   6.5  
At4g15215.1 68417.m02332 ABC transporter family protein similar ...    28   6.5  
At3g60160.1 68416.m06717 ABC transporter family protein similar ...    28   6.5  
At2g46620.1 68415.m05815 AAA-type ATPase family protein contains...    28   6.5  
At1g10920.1 68414.m01254 disease resistance protein (CC-NBS-LRR ...    28   6.5  
At5g60340.1 68418.m07564 maoC-like dehydratase domain-containing...    27   8.5  
At4g14670.1 68417.m02255 heat shock protein 101, putative / HSP1...    27   8.5  
At1g74310.1 68414.m08605 heat shock protein 101 (HSP101) identic...    27   8.5  
At1g73170.1 68414.m08466 expressed protein                             27   8.5  
At1g71960.1 68414.m08318 ABC transporter family protein similar ...    27   8.5  
At1g53600.1 68414.m06090 pentatricopeptide (PPR) repeat-containi...    27   8.5  

>At2g27600.1 68415.m03346 AAA-type ATPase family protein / vacuolar
           sorting protein-related similar to SP|P46467 SKD1
           protein (Vacuolar sorting protein 4b) {Mus musculus};
           contains Pfam profiles PF00004: ATPase AAA family,
           PF04212: MIT domain
          Length = 435

 Score =  127 bits (306), Expect = 8e-30
 Identities = 75/191 (39%), Positives = 97/191 (50%), Gaps = 6/191 (3%)
 Frame = +3

Query: 114 SNTLQKAIDLVTKATEEDKNKNYEEALRLYEHGVEYFLHAVKYEAQGERAKESIRAKCLQ 293
           SN  ++AI+ V +A  ED   NY +A  LY + +EYF   +KYE +  + +E+I  K  +
Sbjct: 3   SNFKEQAIEYVKQAVHEDNAGNYNKAFPLYMNALEYFKTHLKYE-KNPKIREAITQKFTE 61

Query: 294 YLDRAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX------LQGKLEGA 455
           YL RA                                               L+  L  A
Sbjct: 62  YLRRAEEIRAVLDEGGSGPGSNGDAAVATRPKTKPKDGEGGGKDGEDPEQSKLRAGLNSA 121

Query: 456 IVVEKPHVKWSDVAGXXXXXXXXXXXVILPIKFPHLFTGKRIPWKGILLFGPPGTGKSYL 635
           IV EKP++KWSDVAG           VILP+KFP  FTGKR PW+  LL+GPPGTGKSYL
Sbjct: 122 IVREKPNIKWSDVAGLESAKQALQEAVILPVKFPQFFTGKRRPWRAFLLYGPPGTGKSYL 181

Query: 636 AKAVATEANNS 668
           AKAVATEA+++
Sbjct: 182 AKAVATEADST 192


>At2g34560.2 68415.m04246 katanin, putative similar to katanin p60
           subunit [Strongylocentrotus purpuratus] GI:3098603;
           contains Pfam profile PF00004: ATPase AAA family
          Length = 393

 Score = 83.4 bits (197), Expect = 1e-16
 Identities = 38/79 (48%), Positives = 47/79 (59%)
 Frame = +3

Query: 432 LQGKLEGAIVVEKPHVKWSDVAGXXXXXXXXXXXVILPIKFPHLFTGKRIPWKGILLFGP 611
           L   L   I+   P++KW  + G           V++PIK+P  F G   PWKGILLFGP
Sbjct: 94  LAESLSRDIIRGNPNIKWESIKGLENAKKLLKEAVVMPIKYPTYFNGLLTPWKGILLFGP 153

Query: 612 PGTGKSYLAKAVATEANNS 668
           PGTGK+ LAKAVATE N +
Sbjct: 154 PGTGKTMLAKAVATECNTT 172


>At2g34560.1 68415.m04245 katanin, putative similar to katanin p60
           subunit [Strongylocentrotus purpuratus] GI:3098603;
           contains Pfam profile PF00004: ATPase AAA family
          Length = 384

 Score = 83.4 bits (197), Expect = 1e-16
 Identities = 38/79 (48%), Positives = 47/79 (59%)
 Frame = +3

Query: 432 LQGKLEGAIVVEKPHVKWSDVAGXXXXXXXXXXXVILPIKFPHLFTGKRIPWKGILLFGP 611
           L   L   I+   P++KW  + G           V++PIK+P  F G   PWKGILLFGP
Sbjct: 85  LAESLSRDIIRGNPNIKWESIKGLENAKKLLKEAVVMPIKYPTYFNGLLTPWKGILLFGP 144

Query: 612 PGTGKSYLAKAVATEANNS 668
           PGTGK+ LAKAVATE N +
Sbjct: 145 PGTGKTMLAKAVATECNTT 163


>At1g80350.1 68414.m09406 katanin 1 (KTN1) identical to katanin 1
           (KTN1) [Arabidopsis thaliana] GI:14133602
          Length = 523

 Score = 81.8 bits (193), Expect = 4e-16
 Identities = 38/79 (48%), Positives = 47/79 (59%)
 Frame = +3

Query: 432 LQGKLEGAIVVEKPHVKWSDVAGXXXXXXXXXXXVILPIKFPHLFTGKRIPWKGILLFGP 611
           L   LE  ++   P V+W DVAG           V+LP+  P  F G R PWKG+L+FGP
Sbjct: 221 LAAMLERDVLDSTPGVRWDDVAGLSEAKRLLEEAVVLPLWMPEYFQGIRRPWKGVLMFGP 280

Query: 612 PGTGKSYLAKAVATEANNS 668
           PGTGK+ LAKAVATE   +
Sbjct: 281 PGTGKTLLAKAVATECGTT 299


>At2g45500.1 68415.m05659 AAA-type ATPase family protein similar to
           SP|Q9QYY8 Spastin (Fragment) {Mus musculus}; contains
           Pfam profiles PF00004: ATPase AAA family, PF04212: MIT
           domain
          Length = 487

 Score = 74.5 bits (175), Expect = 6e-14
 Identities = 38/68 (55%), Positives = 43/68 (63%)
 Frame = +3

Query: 456 IVVEKPHVKWSDVAGXXXXXXXXXXXVILPIKFPHLFTGKRIPWKGILLFGPPGTGKSYL 635
           IV   P VKW DVAG           VILP K   LFTG R P +G+LLFGPPG GK+ L
Sbjct: 206 IVDRSPSVKWDDVAGLNGAKQALLEMVILPAKRRDLFTGLRRPARGLLLFGPPGNGKTML 265

Query: 636 AKAVATEA 659
           AKAVA+E+
Sbjct: 266 AKAVASES 273


>At3g27120.1 68416.m03393 spastin ATPase, putative similar to
           SWISS-PROT:Q9QYY8 spastin (Fragment) [Mus musculus];
           contains Pfam domain, PF00004: ATPase, AAA family
          Length = 287

 Score = 68.9 bits (161), Expect = 3e-12
 Identities = 31/63 (49%), Positives = 40/63 (63%)
 Frame = +3

Query: 471 PHVKWSDVAGXXXXXXXXXXXVILPIKFPHLFTGKRIPWKGILLFGPPGTGKSYLAKAVA 650
           P+V+W D+AG           VI P+  P +F G R P KG+LLFGPPGTGK+ + KA+A
Sbjct: 5   PNVRWDDIAGLEHAKKCVTEMVIWPLLRPDIFKGCRSPGKGLLLFGPPGTGKTMIGKAIA 64

Query: 651 TEA 659
            EA
Sbjct: 65  GEA 67


>At3g19740.1 68416.m02499 AAA-type ATPase family protein contains
           Pfam domain, PF00004: ATPase, AAA family
          Length = 439

 Score = 62.9 bits (146), Expect = 2e-10
 Identities = 33/63 (52%), Positives = 40/63 (63%), Gaps = 2/63 (3%)
 Frame = +3

Query: 477 VKWSDVAGXXXXXXXXXXXVILPIKFPHLFTGKRI--PWKGILLFGPPGTGKSYLAKAVA 650
           VK+ D+             VILP++ P LFT   +  P KGILLFGPPGTGK+ LAKA+A
Sbjct: 147 VKFDDIGALEHVKKTLNELVILPMRRPELFTRGNLLRPCKGILLFGPPGTGKTLLAKALA 206

Query: 651 TEA 659
           TEA
Sbjct: 207 TEA 209


>At1g64110.2 68414.m07264 AAA-type ATPase family protein contains
           Pfam domain, PF00004: ATPase, AAA family
          Length = 829

 Score = 62.9 bits (146), Expect = 2e-10
 Identities = 33/72 (45%), Positives = 44/72 (61%), Gaps = 1/72 (1%)
 Frame = +3

Query: 456 IVVEKPHVKWSDVAGXXXXXXXXXXXVILPIKFPHLFTGKRI-PWKGILLFGPPGTGKSY 632
           I  E+ +V + D+             V+LP++ P LFTG  + P +GILLFGPPGTGK+ 
Sbjct: 511 IPAEEINVTFKDIGALDEIKESLQELVMLPLRRPDLFTGGLLKPCRGILLFGPPGTGKTM 570

Query: 633 LAKAVATEANNS 668
           LAKA+A EA  S
Sbjct: 571 LAKAIAKEAGAS 582


>At1g64110.1 68414.m07263 AAA-type ATPase family protein contains
           Pfam domain, PF00004: ATPase, AAA family
          Length = 824

 Score = 62.9 bits (146), Expect = 2e-10
 Identities = 33/72 (45%), Positives = 44/72 (61%), Gaps = 1/72 (1%)
 Frame = +3

Query: 456 IVVEKPHVKWSDVAGXXXXXXXXXXXVILPIKFPHLFTGKRI-PWKGILLFGPPGTGKSY 632
           I  E+ +V + D+             V+LP++ P LFTG  + P +GILLFGPPGTGK+ 
Sbjct: 506 IPAEEINVTFKDIGALDEIKESLQELVMLPLRRPDLFTGGLLKPCRGILLFGPPGTGKTM 565

Query: 633 LAKAVATEANNS 668
           LAKA+A EA  S
Sbjct: 566 LAKAIAKEAGAS 577


>At1g50140.1 68414.m05623 AAA-type ATPase family protein contains
           Pfam domain, PF00004: ATPase, AAA family
          Length = 640

 Score = 60.9 bits (141), Expect = 7e-10
 Identities = 32/63 (50%), Positives = 39/63 (61%), Gaps = 2/63 (3%)
 Frame = +3

Query: 477 VKWSDVAGXXXXXXXXXXXVILPIKFPHLFTGKRI--PWKGILLFGPPGTGKSYLAKAVA 650
           VK+ D+             VILP++ P LF    +  P KGILLFGPPGTGK+ LAKA+A
Sbjct: 348 VKFEDIGALEDVKKALNELVILPMRRPELFARGNLLRPCKGILLFGPPGTGKTLLAKALA 407

Query: 651 TEA 659
           TEA
Sbjct: 408 TEA 410


>At1g03000.1 68414.m00271 AAA-type ATPase family protein contains
           Pfam domain, PF00004: ATPase, AAA family ('A'TPases
           'A'ssociated with diverse cellular 'A'ctivities)
          Length = 941

 Score = 60.5 bits (140), Expect = 1e-09
 Identities = 30/64 (46%), Positives = 37/64 (57%)
 Frame = +3

Query: 471 PHVKWSDVAGXXXXXXXXXXXVILPIKFPHLFTGKRIPWKGILLFGPPGTGKSYLAKAVA 650
           P+VKW DV G           V LP+    LF+       G+LL+GPPGTGK+ LAKAVA
Sbjct: 653 PNVKWDDVGGLEDVKTSILDTVQLPLLHKDLFSSGLRKRSGVLLYGPPGTGKTLLAKAVA 712

Query: 651 TEAN 662
           TE +
Sbjct: 713 TECS 716


>At1g02890.1 68414.m00256 AAA-type ATPase family protein contains Pfam
            domain, PF00004: ATPase, AAA family; similar to
            mitochondrial sorting protein 1 (MSP1) (TAT-binding
            homolog 4) (Swiss-Prot:P28737) [Saccharomyces cerevisiae]
          Length = 1252

 Score = 60.1 bits (139), Expect = 1e-09
 Identities = 32/63 (50%), Positives = 40/63 (63%), Gaps = 2/63 (3%)
 Frame = +3

Query: 477  VKWSDVAGXXXXXXXXXXXVILPIKFPHLFTGKRI--PWKGILLFGPPGTGKSYLAKAVA 650
            V +SD+             V+LP++ P LF   ++  P KGILLFGPPGTGK+ LAKAVA
Sbjct: 947  VSFSDIGALENVKDTLKELVMLPLQRPELFGKGQLTKPTKGILLFGPPGTGKTMLAKAVA 1006

Query: 651  TEA 659
            TEA
Sbjct: 1007 TEA 1009


>At4g02480.1 68417.m00335 AAA-type ATPase family protein contains Pfam
            domain, PF00004: ATPase, AAA family; similar to Spastin
            (Swiss-Prot:Q9UBP0) [Homo sapiens] and Spastin (Fragment)
            (Swiss-Prot:Q9QYY8) [Mus musculus]; similar to
            mitochondrial sorting protein 1 (MSP1) protein
            (TAT-binding homolog 4) (Swiss-Prot:P28737)
            [Saccharomyces cerevisiae]
          Length = 1265

 Score = 58.8 bits (136), Expect = 3e-09
 Identities = 31/63 (49%), Positives = 39/63 (61%), Gaps = 2/63 (3%)
 Frame = +3

Query: 477  VKWSDVAGXXXXXXXXXXXVILPIKFPHLFTGKRI--PWKGILLFGPPGTGKSYLAKAVA 650
            V + D+             V+LP++ P LF   ++  P KGILLFGPPGTGK+ LAKAVA
Sbjct: 960  VSFDDIGALENVKETLKELVMLPLQRPELFDKGQLTKPTKGILLFGPPGTGKTMLAKAVA 1019

Query: 651  TEA 659
            TEA
Sbjct: 1020 TEA 1022


>At5g53540.1 68418.m06653 MSP1 protein, putative /
           intramitochondrial sorting protein, putative similar to
           Swiss-Prot:P28737 MSP1 protein (TAT-binding homolog 4)
           [Saccharomyces cerevisiae]; contains Pfam domain,
           PF00004: ATPase, AAA family
          Length = 403

 Score = 58.0 bits (134), Expect = 5e-09
 Identities = 30/63 (47%), Positives = 40/63 (63%), Gaps = 2/63 (3%)
 Frame = +3

Query: 477 VKWSDVAGXXXXXXXXXXXVILPIKFPHLFT-GKRI-PWKGILLFGPPGTGKSYLAKAVA 650
           V++  + G           VILP+K P LF  GK + P KG+LL+GPPGTGK+ LAKA+A
Sbjct: 84  VEFGSIGGLESIKQALYELVILPLKRPELFAYGKLLGPQKGVLLYGPPGTGKTMLAKAIA 143

Query: 651 TEA 659
            E+
Sbjct: 144 RES 146


>At4g28000.1 68417.m04016 AAA-type ATPase family protein contains
           Pfam domain, PF00004: ATPase, AAA family
          Length = 726

 Score = 58.0 bits (134), Expect = 5e-09
 Identities = 29/65 (44%), Positives = 40/65 (61%), Gaps = 1/65 (1%)
 Frame = +3

Query: 477 VKWSDVAGXXXXXXXXXXXVILPIKFPHLFTGKRI-PWKGILLFGPPGTGKSYLAKAVAT 653
           V ++D+             V+LP++ P LF G  + P +GILLFGPPGTGK+ +AKA+A 
Sbjct: 411 VTFADIGSLDETKESLQELVMLPLRRPDLFKGGLLKPCRGILLFGPPGTGKTMMAKAIAN 470

Query: 654 EANNS 668
           EA  S
Sbjct: 471 EAGAS 475


>At4g27680.1 68417.m03980 MSP1 protein, putative /
           intramitochondrial sorting protein, putative similar to
           Swiss-Prot:P28737 MSP1 protein (TAT-binding homolog 4)
           [Saccharomyces cerevisiae]; contains Pfam domain,
           PF00004: ATPase, AAA family
          Length = 398

 Score = 58.0 bits (134), Expect = 5e-09
 Identities = 30/63 (47%), Positives = 40/63 (63%), Gaps = 2/63 (3%)
 Frame = +3

Query: 477 VKWSDVAGXXXXXXXXXXXVILPIKFPHLFT-GKRI-PWKGILLFGPPGTGKSYLAKAVA 650
           V++  + G           VILP+K P LF  GK + P KG+LL+GPPGTGK+ LAKA+A
Sbjct: 81  VEFGSIGGLETIKQALYELVILPLKRPELFAYGKLLGPQKGVLLYGPPGTGKTMLAKAIA 140

Query: 651 TEA 659
            E+
Sbjct: 141 KES 143


>At3g09840.1 68416.m01174 cell division cycle protein 48 (CDC48A)
           (CDC48) identical to SP|P54609 Cell division cycle
           protein 48 homolog {Arabidopsis thaliana}
          Length = 809

 Score = 57.2 bits (132), Expect = 9e-09
 Identities = 28/67 (41%), Positives = 38/67 (56%), Gaps = 1/67 (1%)
 Frame = +3

Query: 459 VVEKPHVKWSDVAGXXXXXXXXXXXVILPIKFPHLFTGKRI-PWKGILLFGPPGTGKSYL 635
           VVE P+V W+D+ G           V  P++ P  F    + P KG+L +GPPG GK+ L
Sbjct: 471 VVEVPNVSWNDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLL 530

Query: 636 AKAVATE 656
           AKA+A E
Sbjct: 531 AKAIANE 537



 Score = 52.0 bits (119), Expect = 3e-07
 Identities = 27/61 (44%), Positives = 36/61 (59%), Gaps = 1/61 (1%)
 Frame = +3

Query: 477 VKWSDVAGXXXXXXXXXXXVILPIKFPHLFTGKRI-PWKGILLFGPPGTGKSYLAKAVAT 653
           V + DV G           V LP++ P LF    + P KGILL+GPPG+GK+ +A+AVA 
Sbjct: 204 VGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVAN 263

Query: 654 E 656
           E
Sbjct: 264 E 264


>At5g03340.1 68418.m00286 cell division cycle protein 48, putative /
           CDC48, putative very strong similarity to SP|P54609 Cell
           division cycle protein 48 homolog {Arabidopsis
           thaliana}; contains Pfam profiles PF00004: ATPase AAA
           family, PF02359: Cell division protein 48 (CDC48)
           N-terminal domain; supporting cDNA
           gi|26449351|dbj|AK117125.1|
          Length = 810

 Score = 56.8 bits (131), Expect = 1e-08
 Identities = 28/67 (41%), Positives = 37/67 (55%), Gaps = 1/67 (1%)
 Frame = +3

Query: 459 VVEKPHVKWSDVAGXXXXXXXXXXXVILPIKFPHLFTGKRI-PWKGILLFGPPGTGKSYL 635
           VVE P+V W D+ G           V  P++ P  F    + P KG+L +GPPG GK+ L
Sbjct: 471 VVEVPNVSWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLL 530

Query: 636 AKAVATE 656
           AKA+A E
Sbjct: 531 AKAIANE 537



 Score = 52.0 bits (119), Expect = 3e-07
 Identities = 27/61 (44%), Positives = 36/61 (59%), Gaps = 1/61 (1%)
 Frame = +3

Query: 477 VKWSDVAGXXXXXXXXXXXVILPIKFPHLFTGKRI-PWKGILLFGPPGTGKSYLAKAVAT 653
           V + DV G           V LP++ P LF    + P KGILL+GPPG+GK+ +A+AVA 
Sbjct: 204 VGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVAN 263

Query: 654 E 656
           E
Sbjct: 264 E 264


>At3g53230.1 68416.m05865 cell division cycle protein 48, putative /
           CDC48, putative very strong similarity to SP|P54609 Cell
           division cycle protein 48 homolog {Arabidopsis
           thaliana}; contains Pfam profiles PF00004: ATPase AAA
           family, PF02359: Cell division protein 48 (CDC48)
           N-terminal domain
          Length = 815

 Score = 56.8 bits (131), Expect = 1e-08
 Identities = 28/67 (41%), Positives = 37/67 (55%), Gaps = 1/67 (1%)
 Frame = +3

Query: 459 VVEKPHVKWSDVAGXXXXXXXXXXXVILPIKFPHLFTGKRI-PWKGILLFGPPGTGKSYL 635
           VVE P+V W D+ G           V  P++ P  F    + P KG+L +GPPG GK+ L
Sbjct: 472 VVEVPNVSWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLL 531

Query: 636 AKAVATE 656
           AKA+A E
Sbjct: 532 AKAIANE 538



 Score = 52.0 bits (119), Expect = 3e-07
 Identities = 27/61 (44%), Positives = 36/61 (59%), Gaps = 1/61 (1%)
 Frame = +3

Query: 477 VKWSDVAGXXXXXXXXXXXVILPIKFPHLFTGKRI-PWKGILLFGPPGTGKSYLAKAVAT 653
           V + DV G           V LP++ P LF    + P KGILL+GPPG+GK+ +A+AVA 
Sbjct: 205 VGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVAN 264

Query: 654 E 656
           E
Sbjct: 265 E 265


>At4g24860.1 68417.m03559 AAA-type ATPase family protein contains Pfam
            profile PF00004: ATPase, AAA family
          Length = 1122

 Score = 56.4 bits (130), Expect = 2e-08
 Identities = 32/75 (42%), Positives = 41/75 (54%), Gaps = 2/75 (2%)
 Frame = +3

Query: 444  LEGAIVVEKPHVKWSDVAGXXXXXXXXXXXVILPIKFPHLFTGKRI--PWKGILLFGPPG 617
            L   I+     V + D+             V+LP++ P LF    +  P KGILLFGPPG
Sbjct: 806  LSDVILPSDIDVTFDDIGALEKVKDILKELVMLPLQRPELFCKGELTKPCKGILLFGPPG 865

Query: 618  TGKSYLAKAVATEAN 662
            TGK+ LAKAVA EA+
Sbjct: 866  TGKTMLAKAVAKEAD 880


>At3g01610.1 68416.m00092 AAA-type ATPase family protein contains
           Pfam domain, PF00004: ATPase, AAA family ('A'TPases
           'A'ssociated with diverse cellular 'A'ctivities)
          Length = 820

 Score = 54.4 bits (125), Expect = 7e-08
 Identities = 29/72 (40%), Positives = 39/72 (54%), Gaps = 1/72 (1%)
 Frame = +3

Query: 447 EGAIVVEKPHVKWSDVAGXXXXXXXXXXXVILPIKFPHLFTGKRIPWK-GILLFGPPGTG 623
           EG  +V  P VKW DV G           ++ PIK P ++    +  + G LL+GPPG G
Sbjct: 517 EGFSIV--PDVKWDDVGGLDHLRLQFNRYIVRPIKKPDIYKAFGVDLETGFLLYGPPGCG 574

Query: 624 KSYLAKAVATEA 659
           K+ +AKA A EA
Sbjct: 575 KTLIAKAAANEA 586



 Score = 38.7 bits (86), Expect = 0.003
 Identities = 23/60 (38%), Positives = 28/60 (46%), Gaps = 1/60 (1%)
 Frame = +3

Query: 483 WSDVAGXXXXXXXXXXXVILPIKFPHLFTGKRI-PWKGILLFGPPGTGKSYLAKAVATEA 659
           + D  G           V+ PI  P  F    + P  GIL  GPPG GK+ LA A+A EA
Sbjct: 232 FKDFGGIKKILDELEMNVLFPILNPEPFKKIGVKPPSGILFHGPPGCGKTKLANAIANEA 291


>At1g53750.1 68414.m06115 26S proteasome AAA-ATPase subunit (RPT1a)
           similar to 26S proteasome ATPase subunit GI:1395190 from
           [Spinacia oleracea]
          Length = 426

 Score = 54.4 bits (125), Expect = 7e-08
 Identities = 30/69 (43%), Positives = 38/69 (55%), Gaps = 1/69 (1%)
 Frame = +3

Query: 459 VVEKPHVKWSDVAGXXXXXXXXXXXVILPIKFPHLFTGKRI-PWKGILLFGPPGTGKSYL 635
           V EKP V ++DV G           V LP+  P  F    I P KG+L +GPPGTGK+ L
Sbjct: 159 VEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLL 218

Query: 636 AKAVATEAN 662
           A+AVA   +
Sbjct: 219 ARAVANRTD 227


>At1g62130.1 68414.m07010 AAA-type ATPase family protein contains
           Pfam domain, PF00004: ATPase, AAA family
          Length = 1025

 Score = 54.0 bits (124), Expect = 9e-08
 Identities = 29/63 (46%), Positives = 37/63 (58%), Gaps = 2/63 (3%)
 Frame = +3

Query: 477 VKWSDVAGXXXXXXXXXXXVILPIKFPHLFTGKRI--PWKGILLFGPPGTGKSYLAKAVA 650
           V + D+             V+LP ++P LF   ++  P  GILLFGP GTGK+ LAKAVA
Sbjct: 732 VTFDDIGALENVKDTLKELVMLPFQWPELFCKGQLTKPCNGILLFGPSGTGKTMLAKAVA 791

Query: 651 TEA 659
           TEA
Sbjct: 792 TEA 794


>At5g58290.1 68418.m07297 26S proteasome AAA-ATPase subunit (RPT3)
           identical to 26S proteasome AAA-ATPase subunit RPT3
           GI:6652882 from [Arabidopsis thaliana]
          Length = 408

 Score = 52.8 bits (121), Expect = 2e-07
 Identities = 28/63 (44%), Positives = 37/63 (58%), Gaps = 1/63 (1%)
 Frame = +3

Query: 465 EKPHVKWSDVAGXXXXXXXXXXXVILPIKFPHLFTGKRI-PWKGILLFGPPGTGKSYLAK 641
           EKP V ++D+ G           V LP+    L+    I P +G+LL+GPPGTGK+ LAK
Sbjct: 148 EKPDVSYNDIGGCDIQKQEIREAVELPLTHHELYKQIGIDPPRGVLLYGPPGTGKTMLAK 207

Query: 642 AVA 650
           AVA
Sbjct: 208 AVA 210


>At2g03670.1 68415.m00326 AAA-type ATPase family protein contains
           Pfam domain, PF00004: ATPase, AAA family ('A'TPases
           'A'ssociated with diverse cellular 'A'ctivities)
          Length = 603

 Score = 52.0 bits (119), Expect = 3e-07
 Identities = 32/72 (44%), Positives = 34/72 (47%), Gaps = 1/72 (1%)
 Frame = +3

Query: 456 IVVEKPHVKWSDVAGXXXXXXXXXXXVILPIKFPHLFTGKRI-PWKGILLFGPPGTGKSY 632
           I VE P V W DV G           V  PIK    F    I P +GILL GPPG  K+ 
Sbjct: 276 ITVEIPKVTWDDVGGLKDLKKKLQQAVEWPIKHSAAFVKMGISPMRGILLHGPPGCSKTT 335

Query: 633 LAKAVATEANNS 668
           LAKA A  A  S
Sbjct: 336 LAKAAANAAQAS 347



 Score = 42.3 bits (95), Expect = 3e-04
 Identities = 21/65 (32%), Positives = 34/65 (52%), Gaps = 4/65 (6%)
 Frame = +3

Query: 480 KW---SDVAGXXXXXXXXXXXVILPIKFPHLFTGKRIPW-KGILLFGPPGTGKSYLAKAV 647
           KW   +++ G           +I P ++P       + W +G+LL+GPPGTGK+ L +AV
Sbjct: 17  KWRAEAEIGGNERALQALRELIIFPFRYPLEARTLGLKWPRGLLLYGPPGTGKTSLVRAV 76

Query: 648 ATEAN 662
             E +
Sbjct: 77  VQECD 81


>At1g09100.1 68414.m01016 26S protease regulatory subunit 6A,
           putative identical to SP:O04019 from [Arabidopsis
           thaliana]
          Length = 423

 Score = 51.6 bits (118), Expect = 5e-07
 Identities = 26/69 (37%), Positives = 38/69 (55%), Gaps = 1/69 (1%)
 Frame = +3

Query: 459 VVEKPHVKWSDVAGXXXXXXXXXXXVILPIKFPHLFTGKRI-PWKGILLFGPPGTGKSYL 635
           V EKP   ++D+ G           ++LP+     F    I P KG+LL+GPPGTGK+ +
Sbjct: 161 VDEKPTEDYNDIGGLEKQIQELVEAIVLPMTHKEQFEKLGIRPPKGVLLYGPPGTGKTLM 220

Query: 636 AKAVATEAN 662
           A+A A + N
Sbjct: 221 ARACAAQTN 229


>At3g56690.1 68416.m06306 calmodulin-binding protein identical to
           calmodulin-binding protein GI:6760428 from [Arabidopsis
           thaliana]
          Length = 1022

 Score = 51.2 bits (117), Expect = 6e-07
 Identities = 29/70 (41%), Positives = 37/70 (52%), Gaps = 2/70 (2%)
 Frame = +3

Query: 456 IVVEKPHVKWSDVAGXXXXXXXXXXXVILPIKFPHLFT--GKRIPWKGILLFGPPGTGKS 629
           +++E P V W DV G           V  P K    F   G R P  GIL+FGPPG  K+
Sbjct: 714 VILEVPKVNWEDVGGQNEVKNQLMEAVEWPQKHQDAFKRIGTRPP-SGILMFGPPGCSKT 772

Query: 630 YLAKAVATEA 659
            +A+AVA+EA
Sbjct: 773 LMARAVASEA 782



 Score = 35.5 bits (78), Expect = 0.032
 Identities = 14/23 (60%), Positives = 18/23 (78%)
 Frame = +3

Query: 582 PWKGILLFGPPGTGKSYLAKAVA 650
           P KG+L+ GPPGTGK+ LA+  A
Sbjct: 417 PTKGVLIHGPPGTGKTSLARTFA 439


>At3g05530.1 68416.m00606 26S proteasome AAA-ATPase subunit (RPT5a)
           identical to GB:AAF22525 GI:6652886 from [Arabidopsis
           thaliana]
          Length = 424

 Score = 51.2 bits (117), Expect = 6e-07
 Identities = 25/69 (36%), Positives = 38/69 (55%), Gaps = 1/69 (1%)
 Frame = +3

Query: 459 VVEKPHVKWSDVAGXXXXXXXXXXXVILPIKFPHLFTGKRI-PWKGILLFGPPGTGKSYL 635
           V EKP   ++D+ G           ++LP+     F    + P KG+LL+GPPGTGK+ +
Sbjct: 162 VDEKPTEDYNDIGGLEKQIQELVEAIVLPMTHKERFEKLGVRPPKGVLLYGPPGTGKTLM 221

Query: 636 AKAVATEAN 662
           A+A A + N
Sbjct: 222 ARACAAQTN 230


>At1g53780.1 68414.m06120 26S proteasome AAA-ATPase subunit,
           putative similar to  26S proteasome AAA-ATPase subunit
           RPT1 SP:Q41365 from [Spinacia oleracea]
          Length = 464

 Score = 50.4 bits (115), Expect = 1e-06
 Identities = 27/65 (41%), Positives = 36/65 (55%), Gaps = 1/65 (1%)
 Frame = +3

Query: 459 VVEKPHVKWSDVAGXXXXXXXXXXXVILPIKFPHLFTGKRI-PWKGILLFGPPGTGKSYL 635
           V EKP   +SD+ G           V LP+  P  F    I P KG+L +GPPG+GK+ +
Sbjct: 196 VEEKPDATYSDIGGCKEQIEKIREVVELPMLHPEKFVRLGIDPPKGVLCYGPPGSGKTLV 255

Query: 636 AKAVA 650
           A+AVA
Sbjct: 256 ARAVA 260


>At1g06430.1 68414.m00680 FtsH protease, putative similar to zinc
           dependent protease GI:7650138 from [Arabidopsis
           thaliana]
          Length = 685

 Score = 50.0 bits (114), Expect = 1e-06
 Identities = 32/63 (50%), Positives = 37/63 (58%), Gaps = 2/63 (3%)
 Frame = +3

Query: 477 VKWSDVAGXXXXXXXXXXXVILPIKFPHLFT--GKRIPWKGILLFGPPGTGKSYLAKAVA 650
           V + DVAG           V   +K P  FT  G RIP KG+LL GPPGTGK+ LAKA+A
Sbjct: 217 VTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIP-KGVLLVGPPGTGKTLLAKAIA 274

Query: 651 TEA 659
            EA
Sbjct: 275 GEA 277


>At5g20000.1 68418.m02380 26S proteasome AAA-ATPase subunit,
           putative almost identical to 26S proteasome AAA-ATPase
           subunit RPT6a GI:6652888 from [Arabidopsis thaliana];
           almost identical to a member of conserved Sug1 CAD
           family AtSUG1 GI:13537115 from [Arabidopsis thaliana]
          Length = 419

 Score = 49.6 bits (113), Expect = 2e-06
 Identities = 29/65 (44%), Positives = 36/65 (55%), Gaps = 2/65 (3%)
 Frame = +3

Query: 462 VEK-PHVKWSDVAGXXXXXXXXXXXVILPIKFPHLFTGKRIPW-KGILLFGPPGTGKSYL 635
           VEK P   +  + G           + LPIK P LF    I   KG+LL+GPPGTGK+ L
Sbjct: 152 VEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLL 211

Query: 636 AKAVA 650
           A+AVA
Sbjct: 212 ARAVA 216


>At5g19990.1 68418.m02379 26S proteasome AAA-ATPase subunit (RPT6a)
          Length = 419

 Score = 49.6 bits (113), Expect = 2e-06
 Identities = 29/65 (44%), Positives = 36/65 (55%), Gaps = 2/65 (3%)
 Frame = +3

Query: 462 VEK-PHVKWSDVAGXXXXXXXXXXXVILPIKFPHLFTGKRIPW-KGILLFGPPGTGKSYL 635
           VEK P   +  + G           + LPIK P LF    I   KG+LL+GPPGTGK+ L
Sbjct: 152 VEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLL 211

Query: 636 AKAVA 650
           A+AVA
Sbjct: 212 ARAVA 216


>At2g30950.1 68415.m03775 FtsH protease (VAR2) identical to zinc
           dependent protease VAR2 GI:7650138 from [Arabidopsis
           thaliana]
          Length = 695

 Score = 49.2 bits (112), Expect = 2e-06
 Identities = 31/63 (49%), Positives = 37/63 (58%), Gaps = 2/63 (3%)
 Frame = +3

Query: 477 VKWSDVAGXXXXXXXXXXXVILPIKFPHLFT--GKRIPWKGILLFGPPGTGKSYLAKAVA 650
           V + DVAG           V   +K P  FT  G +IP KG+LL GPPGTGK+ LAKA+A
Sbjct: 224 VTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGAKIP-KGVLLIGPPGTGKTLLAKAIA 281

Query: 651 TEA 659
            EA
Sbjct: 282 GEA 284


>At1g08270.1 68414.m00913 expressed protein low similarity to
           SP|P46467 SKD1 protein (Vacuolar sorting protein 4b)
           {Mus musculus}
          Length = 126

 Score = 49.2 bits (112), Expect = 2e-06
 Identities = 36/123 (29%), Positives = 49/123 (39%)
 Frame = +3

Query: 207 HGVEYFLHAVKYEAQGERAKESIRAKCLQYLDRAXXXXXXXXXXXXXXXXXXXXXXXXXX 386
           + +EYF   +KYE +  R +++I  K  +YL RA                          
Sbjct: 2   NALEYFKIYLKYE-KNPRIRDAITDKFYEYLRRAEEIRAVLVEVGSGKGSNGDAAVATKP 60

Query: 387 XXXXXXXXXXXXXXXLQGKLEGAIVVEKPHVKWSDVAGXXXXXXXXXXXVILPIKFPHLF 566
                          L+  L  AI+ EKP+VKW+ VAG           VILP+ FP  F
Sbjct: 61  KTKPKDGGDGEESK-LRAGLNSAIIREKPNVKWTVVAGLESAKQALKEAVILPVNFPQFF 119

Query: 567 TGK 575
           TGK
Sbjct: 120 TGK 122


>At5g43010.1 68418.m05245 26S proteasome AAA-ATPase subunit (RPT4a)
           gb|AAF22524.1
          Length = 399

 Score = 48.8 bits (111), Expect = 3e-06
 Identities = 25/61 (40%), Positives = 36/61 (59%), Gaps = 1/61 (1%)
 Frame = +3

Query: 474 HVKWSDVAGXXXXXXXXXXXVILPIKFPHLFTGKRI-PWKGILLFGPPGTGKSYLAKAVA 650
           ++ +S V G           + LP+  P LF    I P KG+LL+GPPGTGK+ LA+A+A
Sbjct: 135 NISYSAVGGLGDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIA 194

Query: 651 T 653
           +
Sbjct: 195 S 195


>At1g45000.1 68414.m05158 26S proteasome regulatory complex subunit
           p42D, putative similar to 26S proteasome regulatory
           complex subunit p42D [Drosophila melanogaster]
           gi|6434958|gb|AAF08391
          Length = 399

 Score = 48.8 bits (111), Expect = 3e-06
 Identities = 25/61 (40%), Positives = 36/61 (59%), Gaps = 1/61 (1%)
 Frame = +3

Query: 474 HVKWSDVAGXXXXXXXXXXXVILPIKFPHLFTGKRI-PWKGILLFGPPGTGKSYLAKAVA 650
           ++ +S V G           + LP+  P LF    I P KG+LL+GPPGTGK+ LA+A+A
Sbjct: 135 NISYSAVGGLGDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIA 194

Query: 651 T 653
           +
Sbjct: 195 S 195


>At4g29040.1 68417.m04153 26S proteasome AAA-ATPase subunit (RPT2a)
           almost identical to 26S proteasome AAA-ATPase subunit
           RPT2a (GI:6652880) {Arabidopsis thaliana}; Drosophila
           melanogaster 26S proteasome subunit 4 ATPase,
           PID:g1066065
          Length = 443

 Score = 48.4 bits (110), Expect = 4e-06
 Identities = 28/69 (40%), Positives = 38/69 (55%), Gaps = 2/69 (2%)
 Frame = +3

Query: 462 VEK-PHVKWSDVAGXXXXXXXXXXXVILPIKFPHLFTGKRI-PWKGILLFGPPGTGKSYL 635
           VEK P   ++D+ G           V LP+  P L+    I P KG++L+G PGTGK+ L
Sbjct: 179 VEKAPLESYADIGGLEAQIQEIKEAVELPLTHPELYEDIGIKPPKGVILYGEPGTGKTLL 238

Query: 636 AKAVATEAN 662
           AKAVA   +
Sbjct: 239 AKAVANSTS 247


>At2g20140.1 68415.m02353 26S protease regulatory complex subunit 4,
           putative similar to Swiss-Prot:P48601 26S protease
           regulatory subunit 4 (P26S4) [Drosophila melanogaster]
          Length = 443

 Score = 48.4 bits (110), Expect = 4e-06
 Identities = 28/69 (40%), Positives = 38/69 (55%), Gaps = 2/69 (2%)
 Frame = +3

Query: 462 VEK-PHVKWSDVAGXXXXXXXXXXXVILPIKFPHLFTGKRI-PWKGILLFGPPGTGKSYL 635
           VEK P   ++D+ G           V LP+  P L+    I P KG++L+G PGTGK+ L
Sbjct: 179 VEKAPLESYADIGGLEAQIQEIKEAVELPLTHPELYEDIGIKPPKGVILYGEPGTGKTLL 238

Query: 636 AKAVATEAN 662
           AKAVA   +
Sbjct: 239 AKAVANSTS 247


>At1g05910.1 68414.m00620 cell division cycle protein 48-related /
           CDC48-related similar to SP|P54609 Cell division cycle
           protein 48 homolog {Arabidopsis thaliana}; contains Pfam
           profiles PF00004: ATPase AAA family, PF00439:
           Bromodomain
          Length = 1210

 Score = 47.6 bits (108), Expect = 7e-06
 Identities = 22/65 (33%), Positives = 35/65 (53%), Gaps = 1/65 (1%)
 Frame = +3

Query: 477 VKWSDVAGXXXXXXXXXXXVILPIKFPHLFTGKRI-PWKGILLFGPPGTGKSYLAKAVAT 653
           + + D+ G           V  P+ +P  F    I P +G+LL GPPGTGK+ +A+A+A 
Sbjct: 378 INFDDIGGLSEYINDLKEMVFFPLLYPEFFASYSITPPRGVLLCGPPGTGKTLIARALAC 437

Query: 654 EANNS 668
            A+ +
Sbjct: 438 AASKA 442


>At5g15250.1 68418.m01786 FtsH protease, putative similar to
           FtsH-like protein Pftf precursor GI:4325041 from
           [Nicotiana tabacum]
          Length = 687

 Score = 46.8 bits (106), Expect = 1e-05
 Identities = 29/63 (46%), Positives = 37/63 (58%), Gaps = 2/63 (3%)
 Frame = +3

Query: 477 VKWSDVAGXXXXXXXXXXXVILPIKFPHLFT--GKRIPWKGILLFGPPGTGKSYLAKAVA 650
           + + DVAG           V   +K P  F+  G +IP KG+LL GPPGTGK+ LAKA+A
Sbjct: 220 ITFEDVAGVDEAKQDFEEIVEF-LKTPEKFSALGAKIP-KGVLLTGPPGTGKTLLAKAIA 277

Query: 651 TEA 659
            EA
Sbjct: 278 GEA 280


>At1g08270.2 68414.m00912 expressed protein low similarity to
           SP|P46467 SKD1 protein (Vacuolar sorting protein 4b)
           {Mus musculus}
          Length = 132

 Score = 46.8 bits (106), Expect = 1e-05
 Identities = 35/125 (28%), Positives = 49/125 (39%)
 Frame = +3

Query: 207 HGVEYFLHAVKYEAQGERAKESIRAKCLQYLDRAXXXXXXXXXXXXXXXXXXXXXXXXXX 386
           + +EYF   +KYE +  R +++I  K  +YL RA                          
Sbjct: 2   NALEYFKIYLKYE-KNPRIRDAITDKFYEYLRRAEEIRAVLVEVGSGKGSNGDAAVATKP 60

Query: 387 XXXXXXXXXXXXXXXLQGKLEGAIVVEKPHVKWSDVAGXXXXXXXXXXXVILPIKFPHLF 566
                          L+  L  AI+ EKP+VKW+ VAG           VILP+ FP  F
Sbjct: 61  KTKPKDGGDGEESK-LRAGLNSAIIREKPNVKWTVVAGLESAKQALKEAVILPVNFPQFF 119

Query: 567 TGKRI 581
           T + I
Sbjct: 120 TARAI 124


>At1g50250.1 68414.m05634 cell division protein ftsH homolog 1,
           chloroplast (FTSH1) (FTSH) identical to SP:Q39102 Cell
           division protein ftsH homolog 1, chloroplast            
           precursor (EC 3.4.24.-) [Arabidopsis thaliana]
          Length = 716

 Score = 46.0 bits (104), Expect = 2e-05
 Identities = 31/68 (45%), Positives = 39/68 (57%), Gaps = 2/68 (2%)
 Frame = +3

Query: 462 VEKPHVKWSDVAGXXXXXXXXXXXVILPIKFPHLFT--GKRIPWKGILLFGPPGTGKSYL 635
           V +  V ++DVAG           V   +K P  +T  G +IP KG LL GPPGTGK+ L
Sbjct: 254 VPETGVSFADVAGADQAKLELQEVVDF-LKNPDKYTALGAKIP-KGCLLVGPPGTGKTLL 311

Query: 636 AKAVATEA 659
           A+AVA EA
Sbjct: 312 ARAVAGEA 319


>At5g42270.1 68418.m05145 FtsH protease, putative similar to FtsH
           protease GI:13183728 from [Medicago sativa]
          Length = 704

 Score = 45.2 bits (102), Expect = 4e-05
 Identities = 31/68 (45%), Positives = 38/68 (55%), Gaps = 2/68 (2%)
 Frame = +3

Query: 462 VEKPHVKWSDVAGXXXXXXXXXXXVILPIKFPHLFT--GKRIPWKGILLFGPPGTGKSYL 635
           V +  V + DVAG           V   +K P  +T  G +IP KG LL GPPGTGK+ L
Sbjct: 242 VPETGVTFGDVAGADQAKLELQEVVDF-LKNPDKYTALGAKIP-KGCLLVGPPGTGKTLL 299

Query: 636 AKAVATEA 659
           A+AVA EA
Sbjct: 300 ARAVAGEA 307


>At2g26140.1 68415.m03137 FtsH protease, putative contains
           similarity to YME1 GI:295582, a member of the
           ftsH-SEC18-PAS1-CDC48 family of putative ATPase-encoding
           genes from [Saccharomyces cerevisiae]
          Length = 717

 Score = 45.2 bits (102), Expect = 4e-05
 Identities = 27/62 (43%), Positives = 38/62 (61%), Gaps = 2/62 (3%)
 Frame = +3

Query: 480 KWSDVAGXXXXXXXXXXXVILPIKFPHLFT--GKRIPWKGILLFGPPGTGKSYLAKAVAT 653
           K+SDV G           ++  ++ P  FT  G ++P KG+LL GPPGTGK+ LA+A+A 
Sbjct: 225 KFSDVKGVDEAKAELEE-IVHYLRDPKRFTRLGGKLP-KGVLLVGPPGTGKTMLARAIAG 282

Query: 654 EA 659
           EA
Sbjct: 283 EA 284


>At5g53170.1 68418.m06610 FtsH protease, putative similar to
           ATP-dependent metalloprotease FtsH1 GI:3600100 from [Mus
           musculus]
          Length = 806

 Score = 43.6 bits (98), Expect = 1e-04
 Identities = 32/75 (42%), Positives = 40/75 (53%), Gaps = 2/75 (2%)
 Frame = +3

Query: 441 KLEGAIVVEKPHVKWSDVAGXXXXXXXXXXXVILPIKFPHLFT--GKRIPWKGILLFGPP 614
           +L   I  EK    + DV G           V+  +K P  FT  G ++P KGILL G P
Sbjct: 347 ELNKEITPEKNVKTFKDVKGCDDAKQELEE-VVEYLKNPSKFTRLGGKLP-KGILLTGAP 404

Query: 615 GTGKSYLAKAVATEA 659
           GTGK+ LAKA+A EA
Sbjct: 405 GTGKTLLAKAIAGEA 419


>At5g64580.1 68418.m08116 AAA-type ATPase family protein similar to
           zinc dependent protease [Arabidopsis thaliana]
           GI:7650138; contains Pfam profile PF00004: ATPase AAA
           family
          Length = 855

 Score = 43.2 bits (97), Expect = 2e-04
 Identities = 29/66 (43%), Positives = 35/66 (53%), Gaps = 1/66 (1%)
 Frame = +3

Query: 465 EKPHVKWSDVAGXXXXXXXXXXXVILPIKFPHLFTGKRIPW-KGILLFGPPGTGKSYLAK 641
           EK  V + D AG           V + +K    F  K I   KG+LL GPPGTGK+ LAK
Sbjct: 309 EKTGVTFDDFAGQEYIKRELQEIVRI-LKNDEEFQNKGIYCPKGVLLHGPPGTGKTLLAK 367

Query: 642 AVATEA 659
           A+A EA
Sbjct: 368 AIAGEA 373


>At3g02450.1 68416.m00232 cell division protein ftsH, putative
           similar to SWISS-PROT:P46469 cell division protein ftsH
           homolog [Lactococcus lactis]; contains Pfam domain,
           PF00004: ATPase, AAA family ('A'TPases 'A'ssociated with
           diverse cellular 'A'ctivities)
          Length = 622

 Score = 43.2 bits (97), Expect = 2e-04
 Identities = 20/30 (66%), Positives = 25/30 (83%)
 Frame = +3

Query: 570 GKRIPWKGILLFGPPGTGKSYLAKAVATEA 659
           G R+P +G+LL GPPGTGK+ LA+AVA EA
Sbjct: 363 GARLP-RGVLLVGPPGTGKTLLARAVAGEA 391


>At5g08470.1 68418.m00999 peroxisome biogenesis protein (PEX1)
            identical to peroxisome biogenesis protein PEX1
            [Arabidopsis thaliana] gi|12006272|gb|AAG44817; contains
            Pfam profile PF00004: ATPase, AAA family; identical to
            cDNA peroxisome biogenesis protein PEX1 (PEX1) mRNA,
            partial cds GI:12006271
          Length = 1130

 Score = 42.7 bits (96), Expect = 2e-04
 Identities = 20/57 (35%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
 Frame = +3

Query: 483  WSDVAGXXXXXXXXXXXVILPIKFPHLFTGKRIPWKG-ILLFGPPGTGKSYLAKAVA 650
            W DV G           + LP KFP +F    +  +  +LL+GPPG GK+++  A A
Sbjct: 843  WEDVGGVTDIKNAIKEMIELPSKFPKIFAKSPLRLRSNVLLYGPPGCGKTHIVGAAA 899



 Score = 34.3 bits (75), Expect = 0.074
 Identities = 16/30 (53%), Positives = 23/30 (76%), Gaps = 1/30 (3%)
 Frame = +3

Query: 564 FTGKRIPWKG-ILLFGPPGTGKSYLAKAVA 650
           F+  +IP  G IL++GPPG+GK+ LA+A A
Sbjct: 585 FSKFKIPSPGHILIYGPPGSGKTILARAAA 614


>At4g23940.1 68417.m03443 FtsH protease, putative contains
           similarity to zinc dependent protease GI:7650138 from
           [Arabidopsis thaliana]
          Length = 946

 Score = 42.7 bits (96), Expect = 2e-04
 Identities = 28/62 (45%), Positives = 35/62 (56%), Gaps = 1/62 (1%)
 Frame = +3

Query: 477 VKWSDVAGXXXXXXXXXXXVILPIKFPHLFTGKRI-PWKGILLFGPPGTGKSYLAKAVAT 653
           VK++DVAG           V   +K P LF    I P  G+LL GPPG GK+ +AKA+A 
Sbjct: 427 VKFADVAGIDEAVDELQELVKY-LKNPDLFDKMGIKPPHGVLLEGPPGCGKTLVAKAIAG 485

Query: 654 EA 659
           EA
Sbjct: 486 EA 487


>At3g15120.1 68416.m01913 AAA-type ATPase family protein contains
           PROSITE domains, PS00674: AAA-protein family signature
           and PS00017: ATP/GTP-binding site motif A (P-loop)
          Length = 1954

 Score = 41.9 bits (94), Expect = 4e-04
 Identities = 20/56 (35%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
 Frame = +3

Query: 483 WSDVAGXXXXXXXXXXXVILPIKFPHLFTGKRI-PWKGILLFGPPGTGKSYLAKAV 647
           W  VAG           V++P+ +P  F    + P +GILL G PGTGK+ + +A+
Sbjct: 718 WDSVAGLEGVTQCMKEVVLIPLLYPEFFDNLGLTPPRGILLHGHPGTGKTLVVRAL 773


>At2g29080.1 68415.m03535 FtsH protease, putative similar to
           AAA-metalloprotease FtsH [Pisum sativum] GI:15021761;
           contains Pfam profiles PF01434: Peptidase family M41,
           PF00004: ATPase AAA family
          Length = 809

 Score = 41.1 bits (92), Expect = 6e-04
 Identities = 23/39 (58%), Positives = 27/39 (69%)
 Frame = +3

Query: 543 PIKFPHLFTGKRIPWKGILLFGPPGTGKSYLAKAVATEA 659
           P K+  L  G +IP KG LL GPPGTGK+ LAKA A E+
Sbjct: 344 PKKYEDL--GAKIP-KGALLVGPPGTGKTLLAKATAGES 379


>At1g07510.1 68414.m00804 FtsH protease, putative similar to
           AAA-metalloprotease FtsH [Pisum sativum] GI:15021761;
           contains Pfam profiles PF01434: Peptidase family M41,
           PF00004: ATPase AAA family
          Length = 813

 Score = 41.1 bits (92), Expect = 6e-04
 Identities = 23/39 (58%), Positives = 27/39 (69%)
 Frame = +3

Query: 543 PIKFPHLFTGKRIPWKGILLFGPPGTGKSYLAKAVATEA 659
           P K+  L  G +IP KG LL GPPGTGK+ LAKA A E+
Sbjct: 349 PKKYEDL--GAKIP-KGALLVGPPGTGKTLLAKATAGES 384


>At3g16290.1 68416.m02056 FtsH protease, putative contains
           similarity to cell division protein FtsH GI:1652085 from
           [Synechocystis sp. PCC 6803]
          Length = 876

 Score = 39.9 bits (89), Expect = 0.001
 Identities = 21/30 (70%), Positives = 23/30 (76%)
 Frame = +3

Query: 570 GKRIPWKGILLFGPPGTGKSYLAKAVATEA 659
           G +IP  GILL GPPG GK+ LAKAVA EA
Sbjct: 439 GVKIPG-GILLCGPPGVGKTLLAKAVAGEA 467


>At3g28520.1 68416.m03562 AAA-type ATPase family protein contains
           Pfam profile: ATPase family PF00004
          Length = 478

 Score = 39.1 bits (87), Expect = 0.003
 Identities = 17/24 (70%), Positives = 19/24 (79%), Gaps = 1/24 (4%)
 Frame = +3

Query: 582 PWK-GILLFGPPGTGKSYLAKAVA 650
           PWK G LLFGPPGTGKS +  A+A
Sbjct: 226 PWKRGYLLFGPPGTGKSTMISAIA 249


>At3g47060.1 68416.m05110 FtsH protease, putative contains
           similarity to FtsH protease GI:13183728 from [Medicago
           sativa]
          Length = 802

 Score = 38.7 bits (86), Expect = 0.003
 Identities = 23/39 (58%), Positives = 27/39 (69%)
 Frame = +3

Query: 543 PIKFPHLFTGKRIPWKGILLFGPPGTGKSYLAKAVATEA 659
           P K+  L  G R P +G+LL G PGTGK+ LAKAVA EA
Sbjct: 347 PEKYVRL--GARPP-RGVLLVGLPGTGKTLLAKAVAGEA 382


>At3g28510.1 68416.m03561 AAA-type ATPase family protein contains
           Pfam profile: PF00004 ATPase family
          Length = 530

 Score = 38.7 bits (86), Expect = 0.003
 Identities = 17/24 (70%), Positives = 19/24 (79%), Gaps = 1/24 (4%)
 Frame = +3

Query: 582 PWK-GILLFGPPGTGKSYLAKAVA 650
           PWK G LLFGPPGTGKS +  A+A
Sbjct: 241 PWKRGYLLFGPPGTGKSTMIAAIA 264


>At3g28540.1 68416.m03564 AAA-type ATPase family protein contains
           Pfam profile: ATPase family PF00004
          Length = 510

 Score = 38.3 bits (85), Expect = 0.005
 Identities = 17/24 (70%), Positives = 19/24 (79%), Gaps = 1/24 (4%)
 Frame = +3

Query: 582 PWK-GILLFGPPGTGKSYLAKAVA 650
           PWK G LLFGPPGTGKS +  A+A
Sbjct: 237 PWKRGYLLFGPPGTGKSTMISAMA 260


>At5g58870.1 68418.m07376 FtsH protease, putative contains
           similarity to cell division protein FtsH homolog 3
           SP:P73437 (EC 3.4.24.-) [strain PCC6803] {Synechocystis
           sp.}
          Length = 806

 Score = 37.9 bits (84), Expect = 0.006
 Identities = 26/64 (40%), Positives = 36/64 (56%), Gaps = 2/64 (3%)
 Frame = +3

Query: 477 VKWSDVAGXXXXXXXXXXXVILPIKFPHLFT--GKRIPWKGILLFGPPGTGKSYLAKAVA 650
           + ++DVAG           V   +K P  +   G R P +G+LL G PGTGK+ LAKAVA
Sbjct: 326 ITFADVAGVDEAKEELEEIVEF-LKNPDRYVRLGARPP-RGVLLVGLPGTGKTLLAKAVA 383

Query: 651 TEAN 662
            E++
Sbjct: 384 GESD 387


>At5g17730.1 68418.m02079 AAA-type ATPase family protein contains
           Pfam profile: ATPase family PF00004
          Length = 470

 Score = 37.5 bits (83), Expect = 0.008
 Identities = 16/24 (66%), Positives = 19/24 (79%), Gaps = 1/24 (4%)
 Frame = +3

Query: 582 PWK-GILLFGPPGTGKSYLAKAVA 650
           PWK G LL+GPPGTGK+ L  A+A
Sbjct: 243 PWKRGYLLYGPPGTGKTSLVAAIA 266


>At4g05380.1 68417.m00820 AAA-type ATPase family protein contains
           similarity to mitochondrial ATPase (AAA family) Bcs1p,
           Saccharomyces cerevisiae, Swiss Prot:P32839
          Length = 248

 Score = 37.5 bits (83), Expect = 0.008
 Identities = 18/29 (62%), Positives = 20/29 (68%), Gaps = 1/29 (3%)
 Frame = +3

Query: 585 WK-GILLFGPPGTGKSYLAKAVATEANNS 668
           WK G LL+GPPGTGKS L  A+A   N S
Sbjct: 30  WKRGYLLYGPPGTGKSSLVAAIANFMNYS 58


>At3g50940.1 68416.m05577 AAA-type ATPase family protein contains
           Pfam profile: ATPase family PF00004
          Length = 451

 Score = 37.5 bits (83), Expect = 0.008
 Identities = 17/27 (62%), Positives = 19/27 (70%), Gaps = 1/27 (3%)
 Frame = +3

Query: 585 WK-GILLFGPPGTGKSYLAKAVATEAN 662
           WK G LL+GPPGTGKS L  A+A   N
Sbjct: 246 WKRGYLLYGPPGTGKSSLIAAIANHLN 272


>At3g50930.1 68416.m05576 AAA-type ATPase family protein contains
           Pfam profile: ATPase family PF00004
          Length = 576

 Score = 36.7 bits (81), Expect = 0.014
 Identities = 17/27 (62%), Positives = 19/27 (70%), Gaps = 1/27 (3%)
 Frame = +3

Query: 585 WK-GILLFGPPGTGKSYLAKAVATEAN 662
           WK G LL+GPPGTGKS L  A+A   N
Sbjct: 298 WKRGYLLYGPPGTGKSSLIAAMANHLN 324


>At4g04910.1 68417.m00714 AAA-type ATPase family protein similar to
           SP|P18708 Vesicular-fusion protein NSF
           (N-ethylmaleimide-sensitive fusion protein)
           (NEM-sensitive fusion protein) {Cricetulus griseus};
           contains Pfam profiles PF00004: ATPase AAA family,
           PF02359: Cell division protein 48 (CDC48) N-terminal
           domain; contains non-consensus AT-AC splice sites at
           intron 2
          Length = 742

 Score = 36.3 bits (80), Expect = 0.018
 Identities = 14/25 (56%), Positives = 19/25 (76%)
 Frame = +3

Query: 588 KGILLFGPPGTGKSYLAKAVATEAN 662
           KG+LLFGPPGTGK+ +A+ +    N
Sbjct: 251 KGMLLFGPPGTGKTLMARQIGKMLN 275


>At3g28610.1 68416.m03571 AAA-type ATPase family protein contains
           Pfam profile: ATPase family PF00004
          Length = 473

 Score = 35.5 bits (78), Expect = 0.032
 Identities = 17/29 (58%), Positives = 20/29 (68%), Gaps = 1/29 (3%)
 Frame = +3

Query: 585 WK-GILLFGPPGTGKSYLAKAVATEANNS 668
           WK G LL+GPPGTGKS +  A+A   N S
Sbjct: 235 WKRGYLLYGPPGTGKSTMIAAMANLLNYS 263


>At5g40010.1 68418.m04852 AAA-type ATPase family protein contains
           Pfam profile: ATPase family PF00004
          Length = 514

 Score = 35.1 bits (77), Expect = 0.043
 Identities = 16/23 (69%), Positives = 18/23 (78%), Gaps = 1/23 (4%)
 Frame = +3

Query: 585 WK-GILLFGPPGTGKSYLAKAVA 650
           WK G LLFGPPGTGKS +  A+A
Sbjct: 242 WKRGYLLFGPPGTGKSTMIAAMA 264


>At5g40000.1 68418.m04851 AAA-type ATPase family protein BCS1
           nuclear gene encoding mitochondrial protein - Homo
           sapiens, EMBL:AF026849 contains Pfam profile: ATPase
           family PF00004
          Length = 470

 Score = 35.1 bits (77), Expect = 0.043
 Identities = 16/27 (59%), Positives = 19/27 (70%), Gaps = 1/27 (3%)
 Frame = +3

Query: 585 WK-GILLFGPPGTGKSYLAKAVATEAN 662
           WK G LL+GPPGTGKS +  A+A   N
Sbjct: 240 WKRGYLLYGPPGTGKSTMISAMANLLN 266


>At5g17760.2 68418.m02083 AAA-type ATPase family protein contains
           Pfam profile: ATPase family PF00004
          Length = 341

 Score = 35.1 bits (77), Expect = 0.043
 Identities = 16/23 (69%), Positives = 18/23 (78%), Gaps = 1/23 (4%)
 Frame = +3

Query: 585 WK-GILLFGPPGTGKSYLAKAVA 650
           WK G LL+GPPGTGKS L  A+A
Sbjct: 252 WKRGYLLYGPPGTGKSSLVAAMA 274


>At5g17760.1 68418.m02082 AAA-type ATPase family protein contains
           Pfam profile: ATPase family PF00004
          Length = 505

 Score = 35.1 bits (77), Expect = 0.043
 Identities = 16/23 (69%), Positives = 18/23 (78%), Gaps = 1/23 (4%)
 Frame = +3

Query: 585 WK-GILLFGPPGTGKSYLAKAVA 650
           WK G LL+GPPGTGKS L  A+A
Sbjct: 252 WKRGYLLYGPPGTGKSSLVAAMA 274


>At5g17740.1 68418.m02080 AAA-type ATPase family protein h-bcs1,
           Homo sapiens, EMBL:AF026849 h-bcs1, Homo sapiens,
           EMBL:AF026849 h-bcs1, Homo sapiens, EMBL:AF026849
           contains Pfam profile: ATPase family PF00004
           gene_id:K17E7.100 contains Pfam profile: ATPase family
           PF00004
          Length = 533

 Score = 35.1 bits (77), Expect = 0.043
 Identities = 16/23 (69%), Positives = 18/23 (78%), Gaps = 1/23 (4%)
 Frame = +3

Query: 585 WK-GILLFGPPGTGKSYLAKAVA 650
           WK G LL+GPPGTGKS L  A+A
Sbjct: 244 WKRGYLLYGPPGTGKSSLVAAMA 266


>At3g28600.1 68416.m03570 AAA-type ATPase family protein contains
           Pfam profile: ATPase family PF00004
          Length = 475

 Score = 35.1 bits (77), Expect = 0.043
 Identities = 17/29 (58%), Positives = 19/29 (65%), Gaps = 1/29 (3%)
 Frame = +3

Query: 585 WK-GILLFGPPGTGKSYLAKAVATEANNS 668
           WK G LL GPPGTGKS +  A+A   N S
Sbjct: 235 WKRGYLLHGPPGTGKSTMIAAMANHLNYS 263


>At3g28580.1 68416.m03568 AAA-type ATPase family protein contains
           Pfam profile: ATPase family PF00004
          Length = 500

 Score = 35.1 bits (77), Expect = 0.043
 Identities = 16/23 (69%), Positives = 18/23 (78%), Gaps = 1/23 (4%)
 Frame = +3

Query: 585 WK-GILLFGPPGTGKSYLAKAVA 650
           WK G LLFGPPGTGKS +  A+A
Sbjct: 239 WKRGYLLFGPPGTGKSTMIAAMA 261


>At1g43910.1 68414.m05066 AAA-type ATPase family protein contains
           Pfam profile: ATPase family PF00004
          Length = 475

 Score = 35.1 bits (77), Expect = 0.043
 Identities = 15/23 (65%), Positives = 18/23 (78%), Gaps = 1/23 (4%)
 Frame = +3

Query: 585 WK-GILLFGPPGTGKSYLAKAVA 650
           WK G LL+GPPGTGKS +  A+A
Sbjct: 238 WKRGYLLYGPPGTGKSSMVAAIA 260


>At4g30250.1 68417.m04301 AAA-type ATPase family protein contains
           Pfam profile: ATPase family PF00004
          Length = 512

 Score = 34.7 bits (76), Expect = 0.056
 Identities = 16/23 (69%), Positives = 18/23 (78%), Gaps = 1/23 (4%)
 Frame = +3

Query: 585 WK-GILLFGPPGTGKSYLAKAVA 650
           WK G LL+GPPGTGKS L  A+A
Sbjct: 237 WKRGYLLYGPPGTGKSSLIAAMA 259


>At2g18193.1 68415.m02117 AAA-type ATPase family protein contains
           Pfam profile: ATPase family PF00004
          Length = 495

 Score = 34.7 bits (76), Expect = 0.056
 Identities = 16/23 (69%), Positives = 18/23 (78%), Gaps = 1/23 (4%)
 Frame = +3

Query: 585 WK-GILLFGPPGTGKSYLAKAVA 650
           WK G LL+GPPGTGKS L  A+A
Sbjct: 242 WKRGYLLYGPPGTGKSSLIAAMA 264


>At2g18190.1 68415.m02116 AAA-type ATPase family protein contains
           Pfam profile: ATPase family PF00004
          Length = 494

 Score = 34.7 bits (76), Expect = 0.056
 Identities = 16/23 (69%), Positives = 18/23 (78%), Gaps = 1/23 (4%)
 Frame = +3

Query: 585 WK-GILLFGPPGTGKSYLAKAVA 650
           WK G LL+GPPGTGKS L  A+A
Sbjct: 243 WKRGYLLYGPPGTGKSSLIAAMA 265


>At1g79560.1 68414.m09275 FtsH protease, putative contains
           similarity to chloroplast FtsH protease GI:5804782 from
           [Nicotiana tabacum]
          Length = 1008

 Score = 34.3 bits (75), Expect = 0.074
 Identities = 13/24 (54%), Positives = 19/24 (79%)
 Frame = +3

Query: 588 KGILLFGPPGTGKSYLAKAVATEA 659
           +G+LL GPPGTGK+  A+ +A E+
Sbjct: 527 RGVLLSGPPGTGKTLFARTLAKES 550


>At5g57480.1 68418.m07183 AAA-type ATPase family protein contains
           Pfam profile: PF00004 ATPase family
          Length = 520

 Score = 33.9 bits (74), Expect = 0.098
 Identities = 15/23 (65%), Positives = 18/23 (78%), Gaps = 1/23 (4%)
 Frame = +3

Query: 585 WK-GILLFGPPGTGKSYLAKAVA 650
           WK G LL+GPPGTGKS +  A+A
Sbjct: 236 WKRGYLLYGPPGTGKSSMIAAMA 258


>At4g25835.1 68417.m03716 AAA-type ATPase family protein contains
           Pfam profile: PF00004 ATPase family
          Length = 506

 Score = 33.9 bits (74), Expect = 0.098
 Identities = 15/23 (65%), Positives = 18/23 (78%), Gaps = 1/23 (4%)
 Frame = +3

Query: 585 WK-GILLFGPPGTGKSYLAKAVA 650
           WK G LL+GPPGTGKS +  A+A
Sbjct: 236 WKRGYLLYGPPGTGKSSMIAAMA 258


>At3g28570.1 68416.m03567 AAA-type ATPase family protein contains
           Pfam profile: ATPase family PF00004
          Length = 451

 Score = 33.9 bits (74), Expect = 0.098
 Identities = 15/23 (65%), Positives = 18/23 (78%), Gaps = 1/23 (4%)
 Frame = +3

Query: 585 WK-GILLFGPPGTGKSYLAKAVA 650
           WK G LL+GPPGTGKS +  A+A
Sbjct: 235 WKRGYLLYGPPGTGKSTMIAAMA 257


>At5g22330.1 68418.m02605 TATA box-binding protein-interacting
           protein-related similar to TATA box-binding
           protein-interacting protein SP:O35753 from [ Mus
           musculus]
          Length = 458

 Score = 33.5 bits (73), Expect = 0.13
 Identities = 14/28 (50%), Positives = 20/28 (71%)
 Frame = +3

Query: 573 KRIPWKGILLFGPPGTGKSYLAKAVATE 656
           K++  K +LL GPPGTGK+ LA  ++ E
Sbjct: 62  KKMAGKALLLAGPPGTGKTALALGISQE 89


>At3g03060.1 68416.m00302 AAA-type ATPase family protein contains a
           ATP/GTP-binding site motif A (P-loop), PROSITE:PS00017
          Length = 639

 Score = 33.5 bits (73), Expect = 0.13
 Identities = 13/26 (50%), Positives = 20/26 (76%)
 Frame = +3

Query: 582 PWKGILLFGPPGTGKSYLAKAVATEA 659
           P++ ILL GPPGTGK+  A+ +A ++
Sbjct: 396 PFRNILLHGPPGTGKTMAARELARKS 421


>At2g18330.1 68415.m02136 AAA-type ATPase family protein contains
           Pfam profile: PF00004 ATPase family associated with
           various cellular activities (AAA)
          Length = 636

 Score = 33.5 bits (73), Expect = 0.13
 Identities = 10/28 (35%), Positives = 22/28 (78%)
 Frame = +3

Query: 576 RIPWKGILLFGPPGTGKSYLAKAVATEA 659
           + P++ ++ +GPPGTGK+ +A+ +A ++
Sbjct: 382 KAPFRNMMFYGPPGTGKTMVAREIARKS 409


>At5g16930.1 68418.m01984 AAA-type ATPase family protein contains
           Pfam domain, PF00004: ATPase, AAA family
          Length = 644

 Score = 33.1 bits (72), Expect = 0.17
 Identities = 12/23 (52%), Positives = 18/23 (78%)
 Frame = +3

Query: 582 PWKGILLFGPPGTGKSYLAKAVA 650
           P++ IL +GPPGTGK+  A+ +A
Sbjct: 397 PFRNILFYGPPGTGKTMAARELA 419


>At4g36580.1 68417.m05193 AAA-type ATPase family protein contains
           Pfam domain, PF00004: ATPase, AAA family ('A'TPases
           'A'ssociated with diverse cellular 'A'ctivities)
          Length = 620

 Score = 33.1 bits (72), Expect = 0.17
 Identities = 10/26 (38%), Positives = 21/26 (80%)
 Frame = +3

Query: 582 PWKGILLFGPPGTGKSYLAKAVATEA 659
           P++ ++ +GPPGTGK+ +A+ +A ++
Sbjct: 369 PFRNMMFYGPPGTGKTMVAREIARKS 394


>At4g24710.1 68417.m03536 AAA-type ATPase family protein similar to
           HPV16 E1 protein binding protein [Homo sapiens]
           gi|2232019|gb|AAB64095; contains Pfam domain, PF00004:
           ATPase, AAA family ('A'TPases 'A'ssociated with diverse
           cellular 'A'ctivities)
          Length = 467

 Score = 33.1 bits (72), Expect = 0.17
 Identities = 18/32 (56%), Positives = 22/32 (68%)
 Frame = +3

Query: 555 PHLFTGKRIPWKGILLFGPPGTGKSYLAKAVA 650
           P+L +  RI    ILL GPPGTGK+ L KA+A
Sbjct: 196 PNLVSWNRI----ILLHGPPGTGKTSLCKALA 223


>At3g04340.1 68416.m00459 FtsH protease family protein similar to
           chloroplast FtsH protease [Arabidopsis thaliana]
           GI:1483215; contains Pfam profiles PF01434: Peptidase
           family M41, PF00004: ATPase AAA family
          Length = 960

 Score = 32.7 bits (71), Expect = 0.23
 Identities = 16/30 (53%), Positives = 21/30 (70%)
 Frame = +3

Query: 570 GKRIPWKGILLFGPPGTGKSYLAKAVATEA 659
           G R P +G+L+ G  GTGK+ LA A+A EA
Sbjct: 453 GARAP-RGVLIVGERGTGKTSLALAIAAEA 481


>At4g04180.1 68417.m00593 AAA-type ATPase family protein contains
           Pfam domain, PF00004: ATPase, AAA family
          Length = 609

 Score = 31.9 bits (69), Expect = 0.40
 Identities = 17/70 (24%), Positives = 33/70 (47%), Gaps = 9/70 (12%)
 Frame = +3

Query: 477 VKWSDVAGXXXXXXXXXXXVILPIKFPHLFT----GKRIPW-----KGILLFGPPGTGKS 629
           + W ++AG           +++ +  P ++     G R  +     + +L  GPPGTGK+
Sbjct: 316 ISWDNIAGYDQQKREIEDTILMALHSPEVYDDIVRGTRSKFESNRPRAVLFEGPPGTGKT 375

Query: 630 YLAKAVATEA 659
             A+ +A +A
Sbjct: 376 SCARVIANQA 385


>At5g17750.1 68418.m02081 AAA-type ATPase family protein contains
           Pfam profile: ATPase family PF00004
          Length = 392

 Score = 31.1 bits (67), Expect = 0.69
 Identities = 14/23 (60%), Positives = 16/23 (69%), Gaps = 1/23 (4%)
 Frame = +3

Query: 585 WK-GILLFGPPGTGKSYLAKAVA 650
           WK    L+GPPGTGKS L  A+A
Sbjct: 219 WKRSYFLYGPPGTGKSSLVAAMA 241


>At1g67120.1 68414.m07636 midasin-related similar to Midasin
           (MIDAS-containing protein) (Swiss-Prot:Q12019)
           [Saccharomyces cerevisiae]; similar to Midasin
           (MIDAS-containing protein) (Swiss-Prot:Q9NU22) [Homo
           sapiens]; contains Prosite PS00017: ATP/GTP-binding site
           motif A (P-loop)
          Length = 5336

 Score = 30.7 bits (66), Expect = 0.92
 Identities = 12/24 (50%), Positives = 18/24 (75%)
 Frame = +3

Query: 594 ILLFGPPGTGKSYLAKAVATEANN 665
           +LL+GP G+GKS L + +A E+ N
Sbjct: 356 VLLYGPSGSGKSALIRKLADESGN 379


>At3g30842.1 68416.m03968 ABC transporter protein, putative similar
           to pleiotropic drug resistance like protein [Nicotiana
           tabacum] GI:20522008, ABC1 protein [Nicotiana
           plumbaginifolia] GI:14331118; contains Pfam profile
           PF00005: ABC transporter
          Length = 1406

 Score = 29.9 bits (64), Expect = 1.6
 Identities = 13/23 (56%), Positives = 17/23 (73%)
 Frame = +3

Query: 582 PWKGILLFGPPGTGKSYLAKAVA 650
           P +  LL GPPG+GKS L KA++
Sbjct: 171 PGRLTLLLGPPGSGKSTLLKALS 193


>At2g29940.1 68415.m03642 ABC transporter family protein similar to
           ABC1 protein GI:14331118 from [Nicotiana
           plumbaginifolia]
          Length = 1426

 Score = 29.9 bits (64), Expect = 1.6
 Identities = 14/29 (48%), Positives = 19/29 (65%)
 Frame = +3

Query: 582 PWKGILLFGPPGTGKSYLAKAVATEANNS 668
           P +  LL GPPG+GKS L  A+A + + S
Sbjct: 185 PGRMTLLLGPPGSGKSTLLLALAGKLDKS 213


>At2g37280.1 68415.m04573 ABC transporter family protein similar to
           PDR5-like ABC transporter GI:1514643 from [Spirodela
           polyrhiza]
          Length = 1413

 Score = 29.5 bits (63), Expect = 2.1
 Identities = 13/29 (44%), Positives = 18/29 (62%)
 Frame = +3

Query: 582 PWKGILLFGPPGTGKSYLAKAVATEANNS 668
           P +  LL GPPG GK+ L KA++    N+
Sbjct: 164 PGRLTLLLGPPGCGKTTLLKALSGNLENN 192


>At2g19120.1 68415.m02232 tRNA-splicing endonuclease positive
           effector-related similar to Endonuclease sen1
           (Swiss-Prot:Q92355) [Schizosaccharomyces pombe]; similar
           to tRNA-splicing endonuclease positive effector
           (Swiss-Prot:Q00416) [Saccharomyces cerevisiae]
          Length = 1090

 Score = 29.5 bits (63), Expect = 2.1
 Identities = 11/20 (55%), Positives = 15/20 (75%)
 Frame = +3

Query: 573 KRIPWKGILLFGPPGTGKSY 632
           K+ PW   L+ GPPGTGK++
Sbjct: 491 KQEPWPFTLVQGPPGTGKTH 510


>At5g53350.1 68418.m06630 ATP-dependent Clp protease ATP-binding
           subunit ClpX1 (CLPX) identical to CLP protease
           regulatory subunit CLPX GI:2674203 from [Arabidopsis
           thaliana]
          Length = 579

 Score = 29.1 bits (62), Expect = 2.8
 Identities = 13/23 (56%), Positives = 16/23 (69%)
 Frame = +3

Query: 594 ILLFGPPGTGKSYLAKAVATEAN 662
           ILL GP G+GK+ LAK +A   N
Sbjct: 226 ILLMGPTGSGKTLLAKTLARFVN 248


>At1g77470.1 68414.m09021 replication factor C 36 kDA, putative
           similar to SWISS-PROT:P40937 activator 1 36 kDa subunit
           (Replication factor C 36 kDa subunit, A1 36 kDa subunit,
           RF-C 36 kDa subunit, RFC36) [Homo sapiens]
          Length = 369

 Score = 29.1 bits (62), Expect = 2.8
 Identities = 12/19 (63%), Positives = 15/19 (78%)
 Frame = +3

Query: 594 ILLFGPPGTGKSYLAKAVA 650
           +LL+GPPGTGK+    AVA
Sbjct: 75  LLLYGPPGTGKTSTILAVA 93


>At1g24290.1 68414.m03065 AAA-type ATPase family protein similar to
           Werner helicase interacting protein [Homo sapiens]
           GI:14349166; contains Pfam profiles PF00004: ATPase
           family associated with various cellular activities
           (AAA), PF00627: UBA/TS-N domain; contains
           ATP/GTP-binding site motif A (P-loop)
          Length = 525

 Score = 29.1 bits (62), Expect = 2.8
 Identities = 12/30 (40%), Positives = 21/30 (70%)
 Frame = +3

Query: 576 RIPWKGILLFGPPGTGKSYLAKAVATEANN 665
           R+P   I+ +GPPGTGK+ +AK++   + +
Sbjct: 136 RLP--SIVFWGPPGTGKTSIAKSLINSSKD 163


>At5g61510.1 68418.m07718 NADP-dependent oxidoreductase, putative
           similar to zeta-crystallin homolog TED2 from Zinnia
           elegans [gi:531096]; contains Pfam zinc-binding
           dehydrogenase domain PF00107
          Length = 406

 Score = 28.7 bits (61), Expect = 3.7
 Identities = 19/61 (31%), Positives = 28/61 (45%)
 Frame = +3

Query: 102 TMTSSNTLQKAIDLVTKATEEDKNKNYEEALRLYEHGVEYFLHAVKYEAQGERAKESIRA 281
           ++++  T+     L T A EE   K   + +R+YEHG    L     E  GE  +  IR 
Sbjct: 57  SLSTRGTVFAVRALSTVAVEESSEKKMVKGIRVYEHGGPEVLKWEDVEV-GEPKEGEIRV 115

Query: 282 K 284
           K
Sbjct: 116 K 116


>At5g49840.1 68418.m06172 ATP-dependent Clp protease ATP-binding
           subunit ClpX, putative similar to CLP protease
           regulatory subunit CLPX GI:2674203 from [Arabidopsis
           thaliana]; non-consensus splice donor GC at exon 4;
           non-consensus splice donor AA at exon 7
          Length = 606

 Score = 28.7 bits (61), Expect = 3.7
 Identities = 12/23 (52%), Positives = 16/23 (69%)
 Frame = +3

Query: 594 ILLFGPPGTGKSYLAKAVATEAN 662
           +LL GP G+GK+ LAK +A   N
Sbjct: 265 VLLLGPTGSGKTLLAKTLARIVN 287


>At1g33360.1 68414.m04129 ATP-dependent Clp protease ATP-binding
           subunit ClpX, putative similar to CLP protease
           regulatory subunit CLPX GI:2674203 from [Arabidopsis
           thaliana]
          Length = 656

 Score = 28.7 bits (61), Expect = 3.7
 Identities = 12/23 (52%), Positives = 16/23 (69%)
 Frame = +3

Query: 594 ILLFGPPGTGKSYLAKAVATEAN 662
           +LL GP G+GK+ LAK +A   N
Sbjct: 311 VLLMGPTGSGKTLLAKTLARLVN 333


>At1g21690.2 68414.m02715 replication factor C 37 kDa, putative
           Similar to SWISS-PROT:P35249 activator 1 37 kDa subunit
           (Replication factor C 37 kDa subunit, A1 37 kDa subunit,
           RF-C 37 kDa subunit, RFC37) [Homo sapiens]; contains
           Pfam domain, PF00004: ATPase, AAA family
          Length = 327

 Score = 28.7 bits (61), Expect = 3.7
 Identities = 11/19 (57%), Positives = 15/19 (78%)
 Frame = +3

Query: 594 ILLFGPPGTGKSYLAKAVA 650
           +L +GPPGTGK+  A A+A
Sbjct: 33  MLFYGPPGTGKTTTALAIA 51


>At1g21690.1 68414.m02714 replication factor C 37 kDa, putative
           Similar to SWISS-PROT:P35249 activator 1 37 kDa subunit
           (Replication factor C 37 kDa subunit, A1 37 kDa subunit,
           RF-C 37 kDa subunit, RFC37) [Homo sapiens]; contains
           Pfam domain, PF00004: ATPase, AAA family
          Length = 339

 Score = 28.7 bits (61), Expect = 3.7
 Identities = 11/19 (57%), Positives = 15/19 (78%)
 Frame = +3

Query: 594 ILLFGPPGTGKSYLAKAVA 650
           +L +GPPGTGK+  A A+A
Sbjct: 45  MLFYGPPGTGKTTTALAIA 63


>At4g30100.1 68417.m04280 tRNA-splicing endonuclease positive
           effector-related contains similarity to SEN1, a positive
           effector of tRNA-splicing endonuclease [Saccharomyces
           cerevisiae] gi|172574|gb|AAB63976
          Length = 1311

 Score = 28.3 bits (60), Expect = 4.9
 Identities = 10/17 (58%), Positives = 13/17 (76%)
 Frame = +3

Query: 582 PWKGILLFGPPGTGKSY 632
           PW   L+ GPPGTGK++
Sbjct: 658 PWPFTLVQGPPGTGKTH 674


>At5g62760.2 68418.m07879 nuclear protein ZAP-related similar to
           nuclear protein ZAP, Mus musculus, EMBL:AB033168 this
           cDNA provides a truncated ORF likely due to a skipped
           exon. An alternative ORF is provided.
          Length = 383

 Score = 27.9 bits (59), Expect = 6.5
 Identities = 12/16 (75%), Positives = 14/16 (87%)
 Frame = +3

Query: 594 ILLFGPPGTGKSYLAK 641
           I+L G PG+GKSYLAK
Sbjct: 279 IILRGLPGSGKSYLAK 294


>At5g62760.1 68418.m07878 nuclear protein ZAP-related similar to
           nuclear protein ZAP, Mus musculus, EMBL:AB033168 this
           cDNA provides a truncated ORF likely due to a skipped
           exon. An alternative ORF is provided.
          Length = 661

 Score = 27.9 bits (59), Expect = 6.5
 Identities = 12/16 (75%), Positives = 14/16 (87%)
 Frame = +3

Query: 594 ILLFGPPGTGKSYLAK 641
           I+L G PG+GKSYLAK
Sbjct: 279 IILRGLPGSGKSYLAK 294


>At4g15230.1 68417.m02333 ABC transporter family protein similar to
           pleiotropic drug resistance like protein [Nicotiana
           tabacum] GI:20522008, PDR5-like ABC transporter
           [Spirodela polyrhiza] GI:1514643; contains Pfam profile
           PF00005: ABC transporter
          Length = 1326

 Score = 27.9 bits (59), Expect = 6.5
 Identities = 12/29 (41%), Positives = 20/29 (68%)
 Frame = +3

Query: 582 PWKGILLFGPPGTGKSYLAKAVATEANNS 668
           P +  LL GPPG GK+ L +A++ + ++S
Sbjct: 166 PGRMTLLLGPPGCGKTTLLQALSGKFSDS 194


>At4g15215.1 68417.m02332 ABC transporter family protein similar to
           PDR5-like ABC transporter [Spirodela polyrhiza]
           GI:1514643; contains Pfam profile PF00005: ABC
           transporter
          Length = 1390

 Score = 27.9 bits (59), Expect = 6.5
 Identities = 12/29 (41%), Positives = 19/29 (65%)
 Frame = +3

Query: 582 PWKGILLFGPPGTGKSYLAKAVATEANNS 668
           P +  LL GPPG GK+ L +A++   ++S
Sbjct: 163 PGRMTLLLGPPGCGKTTLLQALSGRLSHS 191


>At3g60160.1 68416.m06717 ABC transporter family protein similar to
           ATP-binding cassette transporter MRP8 GI:18031899 from
           [Arabidopsis thaliana]
          Length = 1490

 Score = 27.9 bits (59), Expect = 6.5
 Identities = 22/61 (36%), Positives = 29/61 (47%), Gaps = 8/61 (13%)
 Frame = -2

Query: 375 FWIPHPLLVFSFDLF*DI----PLIFQLYQDIEGILHECFLLPFHL----GPHILLHEEN 220
           +W+   +L FSFD         PL FQ Y D+ G+L   FLL   +    G H+L    N
Sbjct: 154 WWLCSFILSFSFDAHFITAKHEPLEFQDYADLTGLLASLFLLAVSIRGKTGFHLLESSGN 213

Query: 219 T 217
           T
Sbjct: 214 T 214


>At2g46620.1 68415.m05815 AAA-type ATPase family protein contains
           Pfam profile: ATPase family PF00004
          Length = 491

 Score = 27.9 bits (59), Expect = 6.5
 Identities = 13/23 (56%), Positives = 15/23 (65%), Gaps = 1/23 (4%)
 Frame = +3

Query: 585 WK-GILLFGPPGTGKSYLAKAVA 650
           WK   LL+GP GTGKS    A+A
Sbjct: 230 WKRSYLLYGPSGTGKSSFVAAMA 252


>At1g10920.1 68414.m01254 disease resistance protein (CC-NBS-LRR
           class), putative domain signature CC-NBS-LRR exists,
           suggestive of a disease resistance protein.
          Length = 727

 Score = 27.9 bits (59), Expect = 6.5
 Identities = 10/32 (31%), Positives = 16/32 (50%)
 Frame = +1

Query: 553 FHICLLAREYHGRASYYLDPLVLVSHTWQRLW 648
           FH  ++ R + G A  ++       H WQR+W
Sbjct: 81  FHHDMVQRHFDGFAWVFVSQQFTQKHVWQRIW 112


>At5g60340.1 68418.m07564 maoC-like dehydratase domain-containing
           protein contains similarity to (R)-specific enoyl-CoA
           hydratase PhaJ1 [Pseudomonas oleovorans]
           gi|22506675|gb|AAM97601; contains Pfam domain PF01575:
           MaoC like domain
          Length = 337

 Score = 27.5 bits (58), Expect = 8.5
 Identities = 12/23 (52%), Positives = 15/23 (65%)
 Frame = +3

Query: 594 ILLFGPPGTGKSYLAKAVATEAN 662
           +L+ G PGTGKS  A A+A   N
Sbjct: 16  LLITGTPGTGKSTTASALAEATN 38


>At4g14670.1 68417.m02255 heat shock protein 101, putative / HSP101,
           putative similar to heat shock protein 101 GI:6715468
           GB:AAF26423 from [Arabidopsis thaliana]
          Length = 623

 Score = 27.5 bits (58), Expect = 8.5
 Identities = 13/29 (44%), Positives = 17/29 (58%)
 Frame = +3

Query: 582 PWKGILLFGPPGTGKSYLAKAVATEANNS 668
           P    L  GP G GK+ LAKA+A +  +S
Sbjct: 563 PSGSFLFLGPTGVGKTELAKALAEQLFDS 591


>At1g74310.1 68414.m08605 heat shock protein 101 (HSP101) identical
           to heat shock protein 101 GI:6715468 GB:AAF26423 from
           [Arabidopsis thaliana]
          Length = 911

 Score = 27.5 bits (58), Expect = 8.5
 Identities = 12/25 (48%), Positives = 15/25 (60%)
 Frame = +3

Query: 582 PWKGILLFGPPGTGKSYLAKAVATE 656
           P    L  GP G GK+ LAKA+A +
Sbjct: 598 PTGSFLFLGPTGVGKTELAKALAEQ 622


>At1g73170.1 68414.m08466 expressed protein
          Length = 666

 Score = 27.5 bits (58), Expect = 8.5
 Identities = 11/24 (45%), Positives = 15/24 (62%)
 Frame = +3

Query: 594 ILLFGPPGTGKSYLAKAVATEANN 665
           +LL GPPG GK+ + + VA    N
Sbjct: 200 LLLIGPPGVGKTTMIREVARMLGN 223


>At1g71960.1 68414.m08318 ABC transporter family protein similar to
           breast cancer resistance protein GB:AAC97367 from [Homo
           sapiens]
          Length = 662

 Score = 27.5 bits (58), Expect = 8.5
 Identities = 14/34 (41%), Positives = 19/34 (55%)
 Frame = +3

Query: 567 TGKRIPWKGILLFGPPGTGKSYLAKAVATEANNS 668
           TG   P + + + GP G+GKS L  AVA   + S
Sbjct: 88  TGMISPGEFMAVLGPSGSGKSTLLNAVAGRLHGS 121


>At1g53600.1 68414.m06090 pentatricopeptide (PPR) repeat-containing
           protein contains Pfam profile PF01535: PPR repeat
          Length = 839

 Score = 27.5 bits (58), Expect = 8.5
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = -2

Query: 417 DHQNHCHYHSSYHH 376
           D  NH H+H+ YHH
Sbjct: 765 DSDNHRHHHAGYHH 778


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,148,732
Number of Sequences: 28952
Number of extensions: 209510
Number of successful extensions: 911
Number of sequences better than 10.0: 115
Number of HSP's better than 10.0 without gapping: 823
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 886
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1412971776
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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