Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30136
         (779 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc gr...    22   4.8  
AJ850297-1|CAH64517.1|  539|Tribolium castaneum putative esteras...    22   6.3  
AJ850295-1|CAH64515.1|  539|Tribolium castaneum putative esteras...    22   6.3  
DQ855499-1|ABH88186.1|  124|Tribolium castaneum chemosensory pro...    21   8.4  
DQ493452-1|ABF48588.1|  305|Tribolium castaneum hedgehog protein.      21   8.4  

>DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc
           growth factor 2 protein.
          Length = 439

 Score = 22.2 bits (45), Expect = 4.8
 Identities = 13/53 (24%), Positives = 23/53 (43%)
 Frame = +1

Query: 310 YRYFCTTSRHVLAFGFTELYIVLLFPSRALLIEWWWSYINPILMLSRCDAMWH 468
           YR    T+   LAF  +   +V  +    L + W +    P  + S+  ++WH
Sbjct: 122 YRNLLETTTRRLAFVNSAYTLVKAYGFDGLDLAWEFPENKPKKIRSKLGSIWH 174


>AJ850297-1|CAH64517.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 21.8 bits (44), Expect = 6.3
 Identities = 9/15 (60%), Positives = 11/15 (73%)
 Frame = +1

Query: 394 ALLIEWWWSYINPIL 438
           ALL ++W  YI PIL
Sbjct: 338 ALLDDYWNEYIPPIL 352


>AJ850295-1|CAH64515.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 21.8 bits (44), Expect = 6.3
 Identities = 9/15 (60%), Positives = 11/15 (73%)
 Frame = +1

Query: 394 ALLIEWWWSYINPIL 438
           ALL ++W  YI PIL
Sbjct: 338 ALLDDYWNEYIPPIL 352


>DQ855499-1|ABH88186.1|  124|Tribolium castaneum chemosensory
           protein 13 protein.
          Length = 124

 Score = 21.4 bits (43), Expect = 8.4
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = -3

Query: 609 IFYYLVKMKLEW 574
           + +YLVK K EW
Sbjct: 84  VIHYLVKQKPEW 95


>DQ493452-1|ABF48588.1|  305|Tribolium castaneum hedgehog protein.
          Length = 305

 Score = 21.4 bits (43), Expect = 8.4
 Identities = 6/17 (35%), Positives = 11/17 (64%)
 Frame = +3

Query: 330 KPSCSCFWIHRIIYSSS 380
           KP    FW  R++Y+++
Sbjct: 278 KPGVGVFWYARLLYATA 294


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 165,376
Number of Sequences: 336
Number of extensions: 3485
Number of successful extensions: 10
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21065107
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)