Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30136
         (779 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transpos...    24   4.6  
AY341205-1|AAR13769.1|  285|Anopheles gambiae period protein.          23   8.0  
AY341204-1|AAR13768.1|  285|Anopheles gambiae period protein.          23   8.0  
AY341203-1|AAR13767.1|  285|Anopheles gambiae period protein.          23   8.0  
AY341202-1|AAR13766.1|  285|Anopheles gambiae period protein.          23   8.0  

>CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transposon
           polyprotein protein.
          Length = 1726

 Score = 24.2 bits (50), Expect = 4.6
 Identities = 15/27 (55%), Positives = 16/27 (59%)
 Frame = +1

Query: 478 VRAQQQKNQSHSGPS*TLLTT*NDVTI 558
           VRA   KN SHSG S  L TT  + TI
Sbjct: 89  VRAFLLKNSSHSGASSGLNTTQVNTTI 115


>AY341205-1|AAR13769.1|  285|Anopheles gambiae period protein.
          Length = 285

 Score = 23.4 bits (48), Expect = 8.0
 Identities = 10/34 (29%), Positives = 16/34 (47%)
 Frame = -1

Query: 455 SHRESIRIGLMYDHHHSIKSARLGKRRTIYNSVN 354
           S R+S+ +G +  HH    S    +    YN +N
Sbjct: 135 SERDSVMLGEISPHHEYFDSKSSSETPPSYNQLN 168


>AY341204-1|AAR13768.1|  285|Anopheles gambiae period protein.
          Length = 285

 Score = 23.4 bits (48), Expect = 8.0
 Identities = 10/34 (29%), Positives = 16/34 (47%)
 Frame = -1

Query: 455 SHRESIRIGLMYDHHHSIKSARLGKRRTIYNSVN 354
           S R+S+ +G +  HH    S    +    YN +N
Sbjct: 135 SERDSVMLGEISPHHEYFDSKSSSETPPSYNQLN 168


>AY341203-1|AAR13767.1|  285|Anopheles gambiae period protein.
          Length = 285

 Score = 23.4 bits (48), Expect = 8.0
 Identities = 10/34 (29%), Positives = 16/34 (47%)
 Frame = -1

Query: 455 SHRESIRIGLMYDHHHSIKSARLGKRRTIYNSVN 354
           S R+S+ +G +  HH    S    +    YN +N
Sbjct: 135 SERDSVMLGEISPHHEYFDSKSSSETPPSYNQLN 168


>AY341202-1|AAR13766.1|  285|Anopheles gambiae period protein.
          Length = 285

 Score = 23.4 bits (48), Expect = 8.0
 Identities = 10/34 (29%), Positives = 16/34 (47%)
 Frame = -1

Query: 455 SHRESIRIGLMYDHHHSIKSARLGKRRTIYNSVN 354
           S R+S+ +G +  HH    S    +    YN +N
Sbjct: 135 SERDSVMLGEISPHHEYFDSKSSSETPPSYNQLN 168


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 717,313
Number of Sequences: 2352
Number of extensions: 13954
Number of successful extensions: 24
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 81497388
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)