Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30136
         (779 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z78063-1|CAB01504.1|  161|Caenorhabditis elegans Hypothetical pr...    29   3.7  
AF047658-3|ABC71828.1|  315|Caenorhabditis elegans Hypothetical ...    28   8.6  
AC025726-3|AAK73917.2|  337|Caenorhabditis elegans Hypothetical ...    28   8.6  

>Z78063-1|CAB01504.1|  161|Caenorhabditis elegans Hypothetical
           protein F45D3.1 protein.
          Length = 161

 Score = 29.1 bits (62), Expect = 3.7
 Identities = 11/41 (26%), Positives = 22/41 (53%)
 Frame = -3

Query: 405 YQECTTRKKKNYI*FCESKSKNMTACGAKITIHITISCAVI 283
           +Q+C+ +  KNY    ES++ N+  C  K  +   +S  ++
Sbjct: 3   FQKCSEKSVKNYAVLLESENLNIVRCAVKWLLESDVSLELL 43


>AF047658-3|ABC71828.1|  315|Caenorhabditis elegans Hypothetical
           protein K03H6.4 protein.
          Length = 315

 Score = 27.9 bits (59), Expect = 8.6
 Identities = 10/36 (27%), Positives = 23/36 (63%)
 Frame = +1

Query: 298 YRNVYRYFCTTSRHVLAFGFTELYIVLLFPSRALLI 405
           YR +++YF  TS + + F F   ++++   +++LL+
Sbjct: 214 YRGMHKYFALTSLNSILFHFAPDFMLVFVENKSLLL 249


>AC025726-3|AAK73917.2|  337|Caenorhabditis elegans Hypothetical
           protein Y71G12B.18 protein.
          Length = 337

 Score = 27.9 bits (59), Expect = 8.6
 Identities = 15/56 (26%), Positives = 27/56 (48%)
 Frame = -3

Query: 621 NADDIFYYLVKMKLEWVGTRHNSYVILRCQQSSTRTRMALVFLLLGAYNKIVPHGV 454
           N+D+I + L+ +++ W   R N Y       SS       +  LLG+ + +V  G+
Sbjct: 94  NSDEIKFGLLPVEVSWGNCRENDYSKFHLNVSSLPYSFKSMSDLLGSSSNLVTLGI 149


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,767,027
Number of Sequences: 27780
Number of extensions: 309693
Number of successful extensions: 623
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 607
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 623
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1882685842
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)