Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30135
         (768 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF127810-1|ABL67947.1|  311|Tribolium castaneum nicotinic acetyl...    23   2.7  
EF127809-1|ABL67946.1|  311|Tribolium castaneum nicotinic acetyl...    23   2.7  
EF127808-1|ABL67945.1|  311|Tribolium castaneum nicotinic acetyl...    23   2.7  
EF127807-1|ABL67944.1|  311|Tribolium castaneum nicotinic acetyl...    23   2.7  
EF127806-1|ABL67943.1|  311|Tribolium castaneum nicotinic acetyl...    23   2.7  
AJ969955-1|CAI94742.1|  160|Tribolium castaneum torso-like prote...    22   6.2  
AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxida...    21   8.2  

>EF127810-1|ABL67947.1|  311|Tribolium castaneum nicotinic
           acetylcholine receptor subunitalpha 6 transcript variant
           5 protein.
          Length = 311

 Score = 23.0 bits (47), Expect = 2.7
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = +2

Query: 104 IHLRTLELYYFFSISIP 154
           I +R   LYYFF++ +P
Sbjct: 205 IKIRRRTLYYFFNLIVP 221


>EF127809-1|ABL67946.1|  311|Tribolium castaneum nicotinic
           acetylcholine receptor subunitalpha 6 transcript variant
           4 protein.
          Length = 311

 Score = 23.0 bits (47), Expect = 2.7
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = +2

Query: 104 IHLRTLELYYFFSISIP 154
           I +R   LYYFF++ +P
Sbjct: 205 IKIRRRTLYYFFNLIVP 221


>EF127808-1|ABL67945.1|  311|Tribolium castaneum nicotinic
           acetylcholine receptor subunitalpha 6 transcript variant
           3 protein.
          Length = 311

 Score = 23.0 bits (47), Expect = 2.7
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = +2

Query: 104 IHLRTLELYYFFSISIP 154
           I +R   LYYFF++ +P
Sbjct: 205 IKIRRRTLYYFFNLIVP 221


>EF127807-1|ABL67944.1|  311|Tribolium castaneum nicotinic
           acetylcholine receptor subunitalpha 6 transcript variant
           2 protein.
          Length = 311

 Score = 23.0 bits (47), Expect = 2.7
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = +2

Query: 104 IHLRTLELYYFFSISIP 154
           I +R   LYYFF++ +P
Sbjct: 205 IKIRRRTLYYFFNLIVP 221


>EF127806-1|ABL67943.1|  311|Tribolium castaneum nicotinic
           acetylcholine receptor subunitalpha 6 transcript variant
           1 protein.
          Length = 311

 Score = 23.0 bits (47), Expect = 2.7
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = +2

Query: 104 IHLRTLELYYFFSISIP 154
           I +R   LYYFF++ +P
Sbjct: 205 IKIRRRTLYYFFNLIVP 221


>AJ969955-1|CAI94742.1|  160|Tribolium castaneum torso-like protein
           protein.
          Length = 160

 Score = 21.8 bits (44), Expect = 6.2
 Identities = 10/22 (45%), Positives = 13/22 (59%)
 Frame = +2

Query: 359 CYGTHSIAYFMMSVKLMRIPRH 424
           CY    +A F  SVKL +IP +
Sbjct: 40  CYVLVRLARFRDSVKLSKIPNN 61


>AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxidase
           subunit 1 protein.
          Length = 682

 Score = 21.4 bits (43), Expect = 8.2
 Identities = 6/14 (42%), Positives = 10/14 (71%)
 Frame = -3

Query: 184 HACHVFILKRRYAD 143
           + CH+F++   YAD
Sbjct: 595 YPCHLFVMISNYAD 608


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 175,192
Number of Sequences: 336
Number of extensions: 3807
Number of successful extensions: 16
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20650031
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)