BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV30135
(768 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U51225-1|AAA96405.1| 692|Anopheles gambiae hexamerin protein. 25 3.4
U50475-1|AAA93477.1| 207|Anopheles gambiae protein ( Anopheles ... 25 3.4
AF020872-1|AAC31875.1| 692|Anopheles gambiae hexamerin A protein. 25 3.4
AF020871-1|AAC31874.1| 692|Anopheles gambiae hexamerin A protein. 25 3.4
AF020870-1|AAC31873.1| 692|Anopheles gambiae hexamerin A protein. 25 3.4
EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calc... 24 5.9
CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transpos... 24 5.9
AY344822-1|AAR02433.1| 257|Anopheles gambiae CP5039 protein. 24 5.9
AY344821-1|AAR02432.1| 257|Anopheles gambiae CP5039 protein. 24 5.9
AY344820-1|AAR02431.1| 257|Anopheles gambiae CP5039 protein. 24 5.9
AY344819-1|AAR02430.1| 257|Anopheles gambiae CP5039 protein. 24 5.9
AY344818-1|AAR02429.1| 257|Anopheles gambiae CP5039 protein. 24 5.9
AY344817-1|AAR02428.1| 257|Anopheles gambiae CP5039 protein. 24 5.9
AY344816-1|AAR02427.1| 257|Anopheles gambiae CP5039 protein. 24 5.9
AY344815-1|AAR02426.1| 257|Anopheles gambiae CP5039 protein. 24 5.9
AY705401-1|AAU12510.1| 490|Anopheles gambiae nicotinic acetylch... 23 7.9
AY705400-1|AAU12509.1| 490|Anopheles gambiae nicotinic acetylch... 23 7.9
>U51225-1|AAA96405.1| 692|Anopheles gambiae hexamerin protein.
Length = 692
Score = 24.6 bits (51), Expect = 3.4
Identities = 8/23 (34%), Positives = 17/23 (73%)
Frame = +2
Query: 101 KIHLRTLELYYFFSISIPSF*YK 169
+++ R ++LYY+F +PS+ Y+
Sbjct: 421 QLYERFMDLYYYFKRFLPSYTYE 443
Score = 23.4 bits (48), Expect = 7.9
Identities = 11/26 (42%), Positives = 14/26 (53%)
Frame = +3
Query: 105 FTCAHLNYITSFQSAYLLFNINTWQA 182
F NY+ S +S Y L IN W+A
Sbjct: 310 FKSRDYNYMISDESYYKLDWINAWEA 335
>U50475-1|AAA93477.1| 207|Anopheles gambiae protein ( Anopheles
gambiae putativearylphorin precursor, mRNA, partial cds.
).
Length = 207
Score = 24.6 bits (51), Expect = 3.4
Identities = 8/23 (34%), Positives = 17/23 (73%)
Frame = +2
Query: 101 KIHLRTLELYYFFSISIPSF*YK 169
+++ R ++LYY+F +PS+ Y+
Sbjct: 89 QLYERFMDLYYYFKRFLPSYTYE 111
>AF020872-1|AAC31875.1| 692|Anopheles gambiae hexamerin A protein.
Length = 692
Score = 24.6 bits (51), Expect = 3.4
Identities = 8/23 (34%), Positives = 17/23 (73%)
Frame = +2
Query: 101 KIHLRTLELYYFFSISIPSF*YK 169
+++ R ++LYY+F +PS+ Y+
Sbjct: 421 QLYERFMDLYYYFKRFLPSYTYE 443
>AF020871-1|AAC31874.1| 692|Anopheles gambiae hexamerin A protein.
Length = 692
Score = 24.6 bits (51), Expect = 3.4
Identities = 8/23 (34%), Positives = 17/23 (73%)
Frame = +2
Query: 101 KIHLRTLELYYFFSISIPSF*YK 169
+++ R ++LYY+F +PS+ Y+
Sbjct: 421 QLYERFMDLYYYFKRFLPSYTYE 443
>AF020870-1|AAC31873.1| 692|Anopheles gambiae hexamerin A protein.
Length = 692
Score = 24.6 bits (51), Expect = 3.4
Identities = 8/23 (34%), Positives = 17/23 (73%)
Frame = +2
Query: 101 KIHLRTLELYYFFSISIPSF*YK 169
+++ R ++LYY+F +PS+ Y+
Sbjct: 421 QLYERFMDLYYYFKRFLPSYTYE 443
Score = 23.4 bits (48), Expect = 7.9
Identities = 11/26 (42%), Positives = 14/26 (53%)
Frame = +3
Query: 105 FTCAHLNYITSFQSAYLLFNINTWQA 182
F NY+ S +S Y L IN W+A
Sbjct: 310 FKSRDYNYMISDESYYKLDWINAWEA 335
>EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calcium
channel alpha1 subunit protein.
Length = 1893
Score = 23.8 bits (49), Expect = 5.9
Identities = 23/100 (23%), Positives = 45/100 (45%)
Frame = +1
Query: 409 EDSTTYIKCCQGQDGPITCKEKDSGFV*ALYEAVATFTRP*RAVRGLYVRVLRQTRPRLA 588
+DS T I + +G +E+D+ ++ + T + R + L V+ ++ P+
Sbjct: 780 QDSDTKIPVAEDDEG---YEEQDTPG--ETFDELPTASARPRRLSELSVKKSKKPIPKSN 834
Query: 589 PCGTVDPLPQTRTYRAHWSTSRRTFSNIALTLCMAMARAL 708
P + R + HW + TF NI L +C+ + A+
Sbjct: 835 ALLIFSPTNRFRIF-CHWLCNHSTFGNIIL-VCIMFSSAM 872
>CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transposon
polyprotein protein.
Length = 1726
Score = 23.8 bits (49), Expect = 5.9
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = +1
Query: 457 ITCKEKDSGFV*ALYEAVATFTRP*RAV 540
+TC K+ F+ L E V +FT+ R V
Sbjct: 1224 LTCMVKEESFINKLCERVGSFTKLKRIV 1251
>AY344822-1|AAR02433.1| 257|Anopheles gambiae CP5039 protein.
Length = 257
Score = 23.8 bits (49), Expect = 5.9
Identities = 9/14 (64%), Positives = 11/14 (78%)
Frame = -1
Query: 465 ASYWTVLSLTTFYV 424
ASYWT+ L TF+V
Sbjct: 223 ASYWTMPQLETFHV 236
>AY344821-1|AAR02432.1| 257|Anopheles gambiae CP5039 protein.
Length = 257
Score = 23.8 bits (49), Expect = 5.9
Identities = 9/14 (64%), Positives = 11/14 (78%)
Frame = -1
Query: 465 ASYWTVLSLTTFYV 424
ASYWT+ L TF+V
Sbjct: 223 ASYWTMPQLETFHV 236
>AY344820-1|AAR02431.1| 257|Anopheles gambiae CP5039 protein.
Length = 257
Score = 23.8 bits (49), Expect = 5.9
Identities = 9/14 (64%), Positives = 11/14 (78%)
Frame = -1
Query: 465 ASYWTVLSLTTFYV 424
ASYWT+ L TF+V
Sbjct: 223 ASYWTMPQLETFHV 236
>AY344819-1|AAR02430.1| 257|Anopheles gambiae CP5039 protein.
Length = 257
Score = 23.8 bits (49), Expect = 5.9
Identities = 9/14 (64%), Positives = 11/14 (78%)
Frame = -1
Query: 465 ASYWTVLSLTTFYV 424
ASYWT+ L TF+V
Sbjct: 223 ASYWTMPQLETFHV 236
>AY344818-1|AAR02429.1| 257|Anopheles gambiae CP5039 protein.
Length = 257
Score = 23.8 bits (49), Expect = 5.9
Identities = 9/14 (64%), Positives = 11/14 (78%)
Frame = -1
Query: 465 ASYWTVLSLTTFYV 424
ASYWT+ L TF+V
Sbjct: 223 ASYWTMPQLETFHV 236
>AY344817-1|AAR02428.1| 257|Anopheles gambiae CP5039 protein.
Length = 257
Score = 23.8 bits (49), Expect = 5.9
Identities = 9/14 (64%), Positives = 11/14 (78%)
Frame = -1
Query: 465 ASYWTVLSLTTFYV 424
ASYWT+ L TF+V
Sbjct: 223 ASYWTMPQLETFHV 236
>AY344816-1|AAR02427.1| 257|Anopheles gambiae CP5039 protein.
Length = 257
Score = 23.8 bits (49), Expect = 5.9
Identities = 9/14 (64%), Positives = 11/14 (78%)
Frame = -1
Query: 465 ASYWTVLSLTTFYV 424
ASYWT+ L TF+V
Sbjct: 223 ASYWTMPQLETFHV 236
>AY344815-1|AAR02426.1| 257|Anopheles gambiae CP5039 protein.
Length = 257
Score = 23.8 bits (49), Expect = 5.9
Identities = 9/14 (64%), Positives = 11/14 (78%)
Frame = -1
Query: 465 ASYWTVLSLTTFYV 424
ASYWT+ L TF+V
Sbjct: 223 ASYWTMPQLETFHV 236
>AY705401-1|AAU12510.1| 490|Anopheles gambiae nicotinic
acetylcholine receptor subunitalpha 6 protein.
Length = 490
Score = 23.4 bits (48), Expect = 7.9
Identities = 8/17 (47%), Positives = 12/17 (70%)
Frame = +2
Query: 104 IHLRTLELYYFFSISIP 154
I +R LYYFF++ +P
Sbjct: 225 IQIRRRTLYYFFNLIVP 241
>AY705400-1|AAU12509.1| 490|Anopheles gambiae nicotinic
acetylcholine receptor subunitalpha 6 protein.
Length = 490
Score = 23.4 bits (48), Expect = 7.9
Identities = 8/17 (47%), Positives = 12/17 (70%)
Frame = +2
Query: 104 IHLRTLELYYFFSISIP 154
I +R LYYFF++ +P
Sbjct: 225 IQIRRRTLYYFFNLIVP 241
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 803,048
Number of Sequences: 2352
Number of extensions: 17289
Number of successful extensions: 41
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 37
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 41
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 79834176
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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