BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= maV30134 (573 letters) Database: spombe 5004 sequences; 2,362,478 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SPAC26A3.04 |rpl2002|rpl20, rpl20-2|60S ribosomal protein L20|Sc... 166 2e-42 SPAC3A12.10 |rpl2001|rpl20-1, rpl20, yl17b, rpl18a-2|60S ribosom... 166 2e-42 SPAC15A10.16 |bud6|aip3, fat1, SPAC15E1.01|actin interacting pro... 28 1.1 SPBC1718.07c |zfs1|moc4|transcription factor Zfs1 |Schizosacchar... 27 2.6 SPCC1682.14 |rpl1902|rpl19-2|60S ribosomal protein L19B|Schizosa... 26 3.4 SPAC22E12.11c |set3||histone lysine methyltransferase Set3|Schiz... 26 3.4 SPBC56F2.02 |rpl1901|rpl19-1|60S ribosomal protein L19|Schizosac... 26 4.5 SPAC4H3.11c |ppc89|mug127|spindle pole body protein Ppc89|Schizo... 26 4.5 SPBC8D2.05c |sfi1||spindle pole body protein Sfi1|Schizosaccharo... 25 6.0 SPAC10F6.13c |||aspartate aminotransferase |Schizosaccharomyces ... 25 6.0 SPAC57A7.08 |pzh1||serine/threonine protein phosphatase Pzh1|Sch... 25 6.0 SPBC1709.08 |cft1||cleavage factor one Cft1 |Schizosaccharomyces... 25 7.9 SPBC1683.05 |||thiamine transporter |Schizosaccharomyces pombe|c... 25 7.9 >SPAC26A3.04 |rpl2002|rpl20, rpl20-2|60S ribosomal protein L20|Schizosaccharomyces pombe|chr 1|||Manual Length = 176 Score = 166 bits (404), Expect = 2e-42 Identities = 85/168 (50%), Positives = 108/168 (64%), Gaps = 4/168 (2%) Frame = +3 Query: 3 IGRKLPSENEPKPPLYKMRIFSPDPIVAKSRFWYFLRQLKKFKKTTGEIVXXXXXXXXXX 182 +GRK+P+E+EP P L++MR+F+P+ VAKSR+WYFL+ + K KK TGEIV Sbjct: 9 VGRKVPTEHEPVPKLFRMRLFAPNESVAKSRYWYFLKMINKVKKATGEIVAINEISEPKP 68 Query: 183 XXXXNFGIWLRYESRSGVHNMYREYRDLSVGGAVTQCYRDMGARHRARAHSIQIIK-VEV 359 FGIW+RY+SRSG HNMY+E+RD + GAV Y DM ARHRAR SI+I+K VEV Sbjct: 69 LKAKVFGIWIRYDSRSGTHNMYKEFRDTTRVGAVEAMYADMAARHRARFRSIRILKVVEV 128 Query: 360 IKAAACRRPQVKQFHNSTIRFPLPKR---VHHYKRLNTFAYKRPSTYF 494 K RR VKQ N ++FPLP R V FA RPST++ Sbjct: 129 EKKEDVRRNYVKQLLNPHLKFPLPHRRTGVVGLAGKKVFAPHRPSTFY 176 >SPAC3A12.10 |rpl2001|rpl20-1, rpl20, yl17b, rpl18a-2|60S ribosomal protein L20a|Schizosaccharomyces pombe|chr 1|||Manual Length = 176 Score = 166 bits (404), Expect = 2e-42 Identities = 85/168 (50%), Positives = 108/168 (64%), Gaps = 4/168 (2%) Frame = +3 Query: 3 IGRKLPSENEPKPPLYKMRIFSPDPIVAKSRFWYFLRQLKKFKKTTGEIVXXXXXXXXXX 182 +GRK+P+E+EP P L++MR+F+P+ VAKSR+WYFL+ + K KK TGEIV Sbjct: 9 VGRKVPTEHEPVPKLFRMRLFAPNESVAKSRYWYFLKMINKVKKATGEIVAINEISEPKP 68 Query: 183 XXXXNFGIWLRYESRSGVHNMYREYRDLSVGGAVTQCYRDMGARHRARAHSIQIIK-VEV 359 FGIW+RY+SRSG HNMY+E+RD + GAV Y DM ARHRAR SI+I+K VEV Sbjct: 69 LKAKVFGIWIRYDSRSGTHNMYKEFRDTTRVGAVEAMYADMAARHRARFRSIRILKVVEV 128 Query: 360 IKAAACRRPQVKQFHNSTIRFPLPKR---VHHYKRLNTFAYKRPSTYF 494 K RR VKQ N ++FPLP R V FA RPST++ Sbjct: 129 EKKEDVRRNYVKQLLNPHLKFPLPHRRTGVVGLAGKKVFAPHRPSTFY 176 >SPAC15A10.16 |bud6|aip3, fat1, SPAC15E1.01|actin interacting protein 3 homolog Bud6|Schizosaccharomyces pombe|chr 1|||Manual Length = 1385 Score = 27.9 bits (59), Expect = 1.1 Identities = 20/57 (35%), Positives = 28/57 (49%), Gaps = 3/57 (5%) Frame = +1 Query: 64 SLRIQLSPNLVSGIS*DNLRSSRRPLVKLSLLRKFQRK---APSRLRILVSGYAMSL 225 S ++ P++V S D+ + SRRP + S RKF K PS + L G SL Sbjct: 295 SPKVSKRPSIVRQDSHDSNKLSRRPTINTSFDRKFSPKLTRTPSLTKSLDPGTPTSL 351 >SPBC1718.07c |zfs1|moc4|transcription factor Zfs1 |Schizosaccharomyces pombe|chr 2|||Manual Length = 404 Score = 26.6 bits (56), Expect = 2.6 Identities = 16/48 (33%), Positives = 22/48 (45%) Frame = -1 Query: 306 PYLYSTE*QLHLHSGHGIHGTCCVHPNETHSVARYQNS*S*WGFSLEF 163 P L S+ +LHSG HG HP+ S+ + S SL+F Sbjct: 125 PSLLSSNATSYLHSGSSPHGNTSNHPSPISSLESLPSRSSTGSGSLDF 172 >SPCC1682.14 |rpl1902|rpl19-2|60S ribosomal protein L19B|Schizosaccharomyces pombe|chr 3|||Manual Length = 193 Score = 26.2 bits (55), Expect = 3.4 Identities = 16/43 (37%), Positives = 23/43 (53%) Frame = +1 Query: 70 RIQLSPNLVSGIS*DNLRSSRRPLVKLSLLRKFQRKAPSRLRI 198 ++ + PN +S IS N R + R LVK L+ + SR RI Sbjct: 21 KVWMDPNEISEISNANSRQNIRKLVKDGLVIRKPNLMHSRFRI 63 >SPAC22E12.11c |set3||histone lysine methyltransferase Set3|Schizosaccharomyces pombe|chr 1|||Manual Length = 859 Score = 26.2 bits (55), Expect = 3.4 Identities = 14/43 (32%), Positives = 21/43 (48%) Frame = +2 Query: 284 HSVL*RYGS*TQSPSSLNTDHQSGSNQGCCVSPSTGQTVPQQH 412 HS R G+ T + +L + + SN G + TG T+P H Sbjct: 99 HSASPRQGNNTGANGALFSQSTNSSNSGSYRNSVTGATLPNAH 141 >SPBC56F2.02 |rpl1901|rpl19-1|60S ribosomal protein L19|Schizosaccharomyces pombe|chr 2|||Manual Length = 193 Score = 25.8 bits (54), Expect = 4.5 Identities = 15/43 (34%), Positives = 23/43 (53%) Frame = +1 Query: 70 RIQLSPNLVSGIS*DNLRSSRRPLVKLSLLRKFQRKAPSRLRI 198 ++ + PN +S IS N R + R L+K L+ + SR RI Sbjct: 21 KVWMDPNEISEISNANSRQNVRKLIKDGLVIRKPNLMHSRFRI 63 >SPAC4H3.11c |ppc89|mug127|spindle pole body protein Ppc89|Schizosaccharomyces pombe|chr 1|||Manual Length = 783 Score = 25.8 bits (54), Expect = 4.5 Identities = 10/31 (32%), Positives = 18/31 (58%) Frame = -2 Query: 95 TRFGDNWIRRENSHFIQGRLGLVLRRELTAD 3 ++F DN++ ++ R+G+ L REL D Sbjct: 3 SQFNDNFVATDDDVGTMARVGMALDRELNGD 33 >SPBC8D2.05c |sfi1||spindle pole body protein Sfi1|Schizosaccharomyces pombe|chr 2|||Manual Length = 840 Score = 25.4 bits (53), Expect = 6.0 Identities = 8/20 (40%), Positives = 13/20 (65%) Frame = +3 Query: 72 DPIVAKSRFWYFLRQLKKFK 131 D ++ RFWY+L + K F+ Sbjct: 476 DRLIVTFRFWYYLMKAKSFQ 495 >SPAC10F6.13c |||aspartate aminotransferase |Schizosaccharomyces pombe|chr 1|||Manual Length = 409 Score = 25.4 bits (53), Expect = 6.0 Identities = 9/23 (39%), Positives = 11/23 (47%) Frame = -2 Query: 425 WESDGAVVELFDLWTATRSSLDY 357 WE G V+ + W A S DY Sbjct: 145 WEKLGVTVDTYPYWDAKNRSFDY 167 >SPAC57A7.08 |pzh1||serine/threonine protein phosphatase Pzh1|Schizosaccharomyces pombe|chr 1|||Manual Length = 515 Score = 25.4 bits (53), Expect = 6.0 Identities = 16/51 (31%), Positives = 24/51 (47%) Frame = +2 Query: 305 GS*TQSPSSLNTDHQSGSNQGCCVSPSTGQTVPQQHHQIPIAQTCAPLQET 457 G+ +QSP+S + SNQ +SPST + HH + +P T Sbjct: 93 GNSSQSPTSPHP-----SNQPAMLSPSTAASQHHHHHSSSSSYAVSPTSPT 138 >SPBC1709.08 |cft1||cleavage factor one Cft1 |Schizosaccharomyces pombe|chr 2|||Manual Length = 1441 Score = 25.0 bits (52), Expect = 7.9 Identities = 12/30 (40%), Positives = 16/30 (53%) Frame = -2 Query: 143 TSGLLELLKLSQEIPETRFGDNWIRRENSH 54 TSG L LL E PE+ G+ + R + H Sbjct: 1274 TSGNLRLLAYDPENPESHSGERLVTRGDFH 1303 >SPBC1683.05 |||thiamine transporter |Schizosaccharomyces pombe|chr 2|||Manual Length = 559 Score = 25.0 bits (52), Expect = 7.9 Identities = 7/24 (29%), Positives = 12/24 (50%) Frame = +3 Query: 39 PPLYKMRIFSPDPIVAKSRFWYFL 110 PP + P + K +FWY++ Sbjct: 534 PPKSNAELVDPSTLSGKDKFWYYI 557 Database: spombe Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 2,362,478 Number of sequences in database: 5004 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 2,342,934 Number of Sequences: 5004 Number of extensions: 46371 Number of successful extensions: 120 Number of sequences better than 10.0: 13 Number of HSP's better than 10.0 without gapping: 116 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 116 length of database: 2,362,478 effective HSP length: 69 effective length of database: 2,017,202 effective search space used: 244081442 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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