Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30134
         (573 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L05093-1|AAC18781.1|  176|Homo sapiens ribosomal protein L18a pr...   226   4e-59
BC071920-1|AAH71920.1|  176|Homo sapiens ribosomal protein L18a ...   226   4e-59
BC066319-1|AAH66319.1|  176|Homo sapiens ribosomal protein L18a ...   226   4e-59
BC007512-1|AAH07512.1|  176|Homo sapiens ribosomal protein L18a ...   226   4e-59
AK222647-1|BAD96367.1|  176|Homo sapiens ribosomal protein L18a ...   226   4e-59
AC005796-1|AAC62828.1|  176|Homo sapiens ribosomal protein L18a ...   226   4e-59
AY779046-1|AAX47571.1|  136|Homo sapiens ribosomal protein L18a-...   171   1e-42
X80822-1|CAA56788.1|  140|Homo sapiens protein ( H.sapiens mRNA ...   158   1e-38
AB007175-1|BAA28596.1|   66|Homo sapiens ribosomal protein L18a ...    94   3e-19

>L05093-1|AAC18781.1|  176|Homo sapiens ribosomal protein L18a
           protein.
          Length = 176

 Score =  226 bits (553), Expect = 4e-59
 Identities = 105/164 (64%), Positives = 123/164 (75%)
 Frame = +3

Query: 3   IGRKLPSENEPKPPLYKMRIFSPDPIVAKSRFWYFLRQLKKFKKTTGEIVXXXXXXXXXX 182
           +GR LP+     PPLY+MRIF+P+ +VAKSRFWYF+ QLKK KK++GEIV          
Sbjct: 13  VGRCLPTPKCHTPPLYRMRIFAPNHVVAKSRFWYFVSQLKKMKKSSGEIVYCGQVFEKSP 72

Query: 183 XXXXNFGIWLRYESRSGVHNMYREYRDLSVGGAVTQCYRDMGARHRARAHSIQIIKVEVI 362
               NFGIWLRY+SRSG HNMYREYRDL+  GAVTQCYRDMGARHRARAHSIQI+KVE I
Sbjct: 73  LRVKNFGIWLRYDSRSGTHNMYREYRDLTTAGAVTQCYRDMGARHRARAHSIQIMKVEEI 132

Query: 363 KAAACRRPQVKQFHNSTIRFPLPKRVHHYKRLNTFAYKRPSTYF 494
            A+ CRRP VKQFH+S I+FPLP RV   +    F  KRP+T+F
Sbjct: 133 AASKCRRPAVKQFHDSKIKFPLPHRVLRRQHKPRFTTKRPNTFF 176


>BC071920-1|AAH71920.1|  176|Homo sapiens ribosomal protein L18a
           protein.
          Length = 176

 Score =  226 bits (553), Expect = 4e-59
 Identities = 105/164 (64%), Positives = 123/164 (75%)
 Frame = +3

Query: 3   IGRKLPSENEPKPPLYKMRIFSPDPIVAKSRFWYFLRQLKKFKKTTGEIVXXXXXXXXXX 182
           +GR LP+     PPLY+MRIF+P+ +VAKSRFWYF+ QLKK KK++GEIV          
Sbjct: 13  VGRCLPTPKCHTPPLYRMRIFAPNHVVAKSRFWYFVSQLKKMKKSSGEIVYCGQVFEKSP 72

Query: 183 XXXXNFGIWLRYESRSGVHNMYREYRDLSVGGAVTQCYRDMGARHRARAHSIQIIKVEVI 362
               NFGIWLRY+SRSG HNMYREYRDL+  GAVTQCYRDMGARHRARAHSIQI+KVE I
Sbjct: 73  LRVKNFGIWLRYDSRSGTHNMYREYRDLTTAGAVTQCYRDMGARHRARAHSIQIMKVEEI 132

Query: 363 KAAACRRPQVKQFHNSTIRFPLPKRVHHYKRLNTFAYKRPSTYF 494
            A+ CRRP VKQFH+S I+FPLP RV   +    F  KRP+T+F
Sbjct: 133 AASKCRRPAVKQFHDSKIKFPLPHRVLRRQHKPRFTTKRPNTFF 176


>BC066319-1|AAH66319.1|  176|Homo sapiens ribosomal protein L18a
           protein.
          Length = 176

 Score =  226 bits (553), Expect = 4e-59
 Identities = 105/164 (64%), Positives = 123/164 (75%)
 Frame = +3

Query: 3   IGRKLPSENEPKPPLYKMRIFSPDPIVAKSRFWYFLRQLKKFKKTTGEIVXXXXXXXXXX 182
           +GR LP+     PPLY+MRIF+P+ +VAKSRFWYF+ QLKK KK++GEIV          
Sbjct: 13  VGRCLPTPKCHTPPLYRMRIFAPNHVVAKSRFWYFVSQLKKMKKSSGEIVYCGQVFEKSP 72

Query: 183 XXXXNFGIWLRYESRSGVHNMYREYRDLSVGGAVTQCYRDMGARHRARAHSIQIIKVEVI 362
               NFGIWLRY+SRSG HNMYREYRDL+  GAVTQCYRDMGARHRARAHSIQI+KVE I
Sbjct: 73  LRVKNFGIWLRYDSRSGTHNMYREYRDLTTAGAVTQCYRDMGARHRARAHSIQIMKVEEI 132

Query: 363 KAAACRRPQVKQFHNSTIRFPLPKRVHHYKRLNTFAYKRPSTYF 494
            A+ CRRP VKQFH+S I+FPLP RV   +    F  KRP+T+F
Sbjct: 133 AASKCRRPAVKQFHDSKIKFPLPHRVLRRQHKPRFTTKRPNTFF 176


>BC007512-1|AAH07512.1|  176|Homo sapiens ribosomal protein L18a
           protein.
          Length = 176

 Score =  226 bits (553), Expect = 4e-59
 Identities = 105/164 (64%), Positives = 123/164 (75%)
 Frame = +3

Query: 3   IGRKLPSENEPKPPLYKMRIFSPDPIVAKSRFWYFLRQLKKFKKTTGEIVXXXXXXXXXX 182
           +GR LP+     PPLY+MRIF+P+ +VAKSRFWYF+ QLKK KK++GEIV          
Sbjct: 13  VGRCLPTPKCHTPPLYRMRIFAPNHVVAKSRFWYFVSQLKKMKKSSGEIVYCGQVFEKSP 72

Query: 183 XXXXNFGIWLRYESRSGVHNMYREYRDLSVGGAVTQCYRDMGARHRARAHSIQIIKVEVI 362
               NFGIWLRY+SRSG HNMYREYRDL+  GAVTQCYRDMGARHRARAHSIQI+KVE I
Sbjct: 73  LRVKNFGIWLRYDSRSGTHNMYREYRDLTTAGAVTQCYRDMGARHRARAHSIQIMKVEEI 132

Query: 363 KAAACRRPQVKQFHNSTIRFPLPKRVHHYKRLNTFAYKRPSTYF 494
            A+ CRRP VKQFH+S I+FPLP RV   +    F  KRP+T+F
Sbjct: 133 AASKCRRPAVKQFHDSKIKFPLPHRVLRRQHKPRFTTKRPNTFF 176


>AK222647-1|BAD96367.1|  176|Homo sapiens ribosomal protein L18a
           variant protein.
          Length = 176

 Score =  226 bits (553), Expect = 4e-59
 Identities = 105/164 (64%), Positives = 123/164 (75%)
 Frame = +3

Query: 3   IGRKLPSENEPKPPLYKMRIFSPDPIVAKSRFWYFLRQLKKFKKTTGEIVXXXXXXXXXX 182
           +GR LP+     PPLY+MRIF+P+ +VAKSRFWYF+ QLKK KK++GEIV          
Sbjct: 13  VGRCLPTPKCHTPPLYRMRIFAPNHVVAKSRFWYFVSQLKKMKKSSGEIVYCGQVFEKSP 72

Query: 183 XXXXNFGIWLRYESRSGVHNMYREYRDLSVGGAVTQCYRDMGARHRARAHSIQIIKVEVI 362
               NFGIWLRY+SRSG HNMYREYRDL+  GAVTQCYRDMGARHRARAHSIQI+KVE I
Sbjct: 73  LRVKNFGIWLRYDSRSGTHNMYREYRDLTAAGAVTQCYRDMGARHRARAHSIQIMKVEEI 132

Query: 363 KAAACRRPQVKQFHNSTIRFPLPKRVHHYKRLNTFAYKRPSTYF 494
            A+ CRRP VKQFH+S I+FPLP RV   +    F  KRP+T+F
Sbjct: 133 AASKCRRPAVKQFHDSKIKFPLPHRVLRRQHKPRFTTKRPNTFF 176


>AC005796-1|AAC62828.1|  176|Homo sapiens ribosomal protein L18a
           protein.
          Length = 176

 Score =  226 bits (553), Expect = 4e-59
 Identities = 105/164 (64%), Positives = 123/164 (75%)
 Frame = +3

Query: 3   IGRKLPSENEPKPPLYKMRIFSPDPIVAKSRFWYFLRQLKKFKKTTGEIVXXXXXXXXXX 182
           +GR LP+     PPLY+MRIF+P+ +VAKSRFWYF+ QLKK KK++GEIV          
Sbjct: 13  VGRCLPTPKCHTPPLYRMRIFAPNHVVAKSRFWYFVSQLKKMKKSSGEIVYCGQVFEKSP 72

Query: 183 XXXXNFGIWLRYESRSGVHNMYREYRDLSVGGAVTQCYRDMGARHRARAHSIQIIKVEVI 362
               NFGIWLRY+SRSG HNMYREYRDL+  GAVTQCYRDMGARHRARAHSIQI+KVE I
Sbjct: 73  LRVKNFGIWLRYDSRSGTHNMYREYRDLTTAGAVTQCYRDMGARHRARAHSIQIMKVEEI 132

Query: 363 KAAACRRPQVKQFHNSTIRFPLPKRVHHYKRLNTFAYKRPSTYF 494
            A+ CRRP VKQFH+S I+FPLP RV   +    F  KRP+T+F
Sbjct: 133 AASKCRRPAVKQFHDSKIKFPLPHRVLRRQHKPRFTTKRPNTFF 176


>AY779046-1|AAX47571.1|  136|Homo sapiens ribosomal protein
           L18a-like protein protein.
          Length = 136

 Score =  171 bits (417), Expect = 1e-42
 Identities = 79/123 (64%), Positives = 93/123 (75%)
 Frame = +3

Query: 3   IGRKLPSENEPKPPLYKMRIFSPDPIVAKSRFWYFLRQLKKFKKTTGEIVXXXXXXXXXX 182
           +GR+LP+     PPLY+MRIF+P+ +VAKSRFWYF+ QLKK KK++GE V          
Sbjct: 13  VGRRLPTPKCHTPPLYRMRIFAPNHVVAKSRFWYFVSQLKKMKKSSGETVYCGQVFEKSP 72

Query: 183 XXXXNFGIWLRYESRSGVHNMYREYRDLSVGGAVTQCYRDMGARHRARAHSIQIIKVEVI 362
               NFGIWLR +SRSG HNMYREYRDL+  GAVTQCYRDMGARHRARAHSIQI+ VE I
Sbjct: 73  LRVKNFGIWLRCDSRSGTHNMYREYRDLTTAGAVTQCYRDMGARHRARAHSIQIMMVEEI 132

Query: 363 KAA 371
            A+
Sbjct: 133 AAS 135


>X80822-1|CAA56788.1|  140|Homo sapiens protein ( H.sapiens mRNA for
           ORF. ).
          Length = 140

 Score =  158 bits (383), Expect = 1e-38
 Identities = 71/100 (71%), Positives = 80/100 (80%)
 Frame = +3

Query: 195 NFGIWLRYESRSGVHNMYREYRDLSVGGAVTQCYRDMGARHRARAHSIQIIKVEVIKAAA 374
           NFGIWL Y+SRSG HNMYREYRDL+  GAVTQCYRDMGARHRARAHSIQI+KVE I  + 
Sbjct: 41  NFGIWLSYDSRSGTHNMYREYRDLTTAGAVTQCYRDMGARHRARAHSIQIMKVEEIAVSK 100

Query: 375 CRRPQVKQFHNSTIRFPLPKRVHHYKRLNTFAYKRPSTYF 494
           CRRP VKQFH+S I+FPLP RV   +    F  KRP+T+F
Sbjct: 101 CRRPAVKQFHDSKIKFPLPHRVLRRQHKPRFTTKRPNTFF 140


>AB007175-1|BAA28596.1|   66|Homo sapiens ribosomal protein L18a
           protein.
          Length = 66

 Score = 94.3 bits (224), Expect = 3e-19
 Identities = 44/66 (66%), Positives = 51/66 (77%)
 Frame = +3

Query: 297 RDMGARHRARAHSIQIIKVEVIKAAACRRPQVKQFHNSTIRFPLPKRVHHYKRLNTFAYK 476
           RDMGARHRARAHSIQI+KVE I A+ CRRP VKQFH+S I+FPLP RV   +    F  K
Sbjct: 1   RDMGARHRARAHSIQIMKVEEIAASKCRRPAVKQFHDSKIKFPLPHRVLRRQHKPRFTTK 60

Query: 477 RPSTYF 494
           RP+T+F
Sbjct: 61  RPNTFF 66


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 83,243,631
Number of Sequences: 237096
Number of extensions: 1731180
Number of successful extensions: 3870
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 3795
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3870
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5872755824
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)