Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV30132
(632 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U22833-2|AAA64322.2| 707|Caenorhabditis elegans Temporarily ass... 149 2e-36
U70858-9|AAB09181.2| 300|Caenorhabditis elegans Serpentine rece... 31 0.91
Z81059-4|CAB02928.2| 228|Caenorhabditis elegans Hypothetical pr... 29 2.1
U80029-16|AAB37595.2| 330|Caenorhabditis elegans Serpentine rec... 29 2.1
Z48006-1|CAA88047.1| 642|Caenorhabditis elegans Hypothetical pr... 29 2.8
AF016448-14|AAB65960.2| 304|Caenorhabditis elegans Hypothetical... 29 2.8
U80029-17|AAB37596.2| 330|Caenorhabditis elegans Serpentine rec... 29 3.7
Z99281-4|CAB16509.1| 571|Caenorhabditis elegans Hypothetical pr... 28 4.8
U23453-9|AAC46755.1| 727|Caenorhabditis elegans Hypothetical pr... 27 8.4
>U22833-2|AAA64322.2| 707|Caenorhabditis elegans Temporarily
assigned gene nameprotein 161 protein.
Length = 707
Score = 149 bits (361), Expect = 2e-36
Identities = 69/101 (68%), Positives = 83/101 (82%)
Frame = +2
Query: 329 MADLEAVLADVSYLMAMEKSKCTPAARASKKIVLPDPSVRSVMHKYMEKKNEVNFDKIFN 508
MADLEAVLADVSYLMAMEKS+ PAARASK+IVLPDPSVRS+M K++EK ++ FDKIFN
Sbjct: 1 MADLEAVLADVSYLMAMEKSRSQPAARASKRIVLPDPSVRSIMQKFLEKSGDMKFDKIFN 60
Query: 509 QVLGYLLFKEFCEQTSDEPVPQLKFYEEIKLFEKQECVEER 631
Q LG+LL K++ E S+ P PQ+KFYE IK +EK E +ER
Sbjct: 61 QKLGFLLLKDYAENVSESPCPQIKFYEAIKEYEKMETPDER 101
>U70858-9|AAB09181.2| 300|Caenorhabditis elegans Serpentine
receptor, class x protein36 protein.
Length = 300
Score = 30.7 bits (66), Expect = 0.91
Identities = 23/73 (31%), Positives = 34/73 (46%), Gaps = 1/73 (1%)
Frame = +1
Query: 19 LYLFSTSNYYFKCLTSQKINFNSTKKLKYL-FLFTYMLLKIVFTIENVQHVSPFINIFCE 195
+ L T N+ F LTS + FN + YL ++ + F NV HV+ FI + C
Sbjct: 29 IILNKTVNHSFSLLTSNQAIFNGVFSVVYLVYVVPMIFFDSSFMKLNVHHVA-FILLICY 87
Query: 196 TVNSRHVKKVMTI 234
S H ++TI
Sbjct: 88 DA-SIHAHAIITI 99
>Z81059-4|CAB02928.2| 228|Caenorhabditis elegans Hypothetical
protein F11F1.6 protein.
Length = 228
Score = 29.5 bits (63), Expect = 2.1
Identities = 13/34 (38%), Positives = 20/34 (58%)
Frame = +3
Query: 165 CVTIHQHIL*NGEQSSCEEGYDYLVEVEIIYSVN 266
CVT H+L G +S E GY+Y+ E+ ++N
Sbjct: 54 CVTDSGHLLEVGSKSYVENGYEYMCAREVTDNLN 87
>U80029-16|AAB37595.2| 330|Caenorhabditis elegans Serpentine
receptor, class ab (class a-like) protein 21 protein.
Length = 330
Score = 29.5 bits (63), Expect = 2.1
Identities = 13/29 (44%), Positives = 19/29 (65%)
Frame = +3
Query: 363 AT*WLWRNRNALLQHELAKKSFFQIQVFG 449
A+ WLW++RNA L H + FQ+ +FG
Sbjct: 41 ASYWLWKSRNARLFH-INVTIIFQVHLFG 68
>Z48006-1|CAA88047.1| 642|Caenorhabditis elegans Hypothetical
protein F19C6.1 protein.
Length = 642
Score = 29.1 bits (62), Expect = 2.8
Identities = 21/95 (22%), Positives = 43/95 (45%), Gaps = 1/95 (1%)
Frame = +2
Query: 335 DLEAVLADVSYLMAMEKSKCTPAARASKKIVLPDPSVRSVMHKYMEKKNEVNFDKIFN-Q 511
++E ++A+ Y+ A E K L P + ++ + EV + + Q
Sbjct: 2 EIENIVANTVYIKARESGGQKKGKSKKWKNYLQFPHYTECLP--LKTEIEVTYAFVVEKQ 59
Query: 512 VLGYLLFKEFCEQTSDEPVPQLKFYEEIKLFEKQE 616
+G LLF EFC+ T+ + +F +++ +E +
Sbjct: 60 PIGKLLFHEFCQATNSQYHQCCQFLTKVEEYETSD 94
>AF016448-14|AAB65960.2| 304|Caenorhabditis elegans Hypothetical
protein F41E6.12 protein.
Length = 304
Score = 29.1 bits (62), Expect = 2.8
Identities = 16/57 (28%), Positives = 30/57 (52%), Gaps = 2/57 (3%)
Frame = +2
Query: 467 MEKKNEVNFDKIFNQVLGYLLFKEFCEQTSDEPVPQLKFYEE--IKLFEKQECVEER 631
+ K + DK+ +QV+ + E+T + VP++K +E + +F + CV ER
Sbjct: 118 LPKPERSSTDKVVDQVIEHSGPASSSEETKNSTVPEVKIEDEKGVLVFVSEYCVIER 174
>U80029-17|AAB37596.2| 330|Caenorhabditis elegans Serpentine
receptor, class ab (class a-like) protein 22 protein.
Length = 330
Score = 28.7 bits (61), Expect = 3.7
Identities = 13/29 (44%), Positives = 19/29 (65%)
Frame = +3
Query: 363 AT*WLWRNRNALLQHELAKKSFFQIQVFG 449
A+ WLW++RNA L H + FQ+ +FG
Sbjct: 41 ASHWLWKSRNARLFH-INVIIIFQVHLFG 68
>Z99281-4|CAB16509.1| 571|Caenorhabditis elegans Hypothetical
protein Y57G11C.7 protein.
Length = 571
Score = 28.3 bits (60), Expect = 4.8
Identities = 14/42 (33%), Positives = 21/42 (50%)
Frame = +1
Query: 10 FLELYLFSTSNYYFKCLTSQKINFNSTKKLKYLFLFTYMLLK 135
F+++ T N Y KC ++NF S K FL ++ LK
Sbjct: 239 FIKICRNKTKNNYNKCFKRIQLNFQSEKSFLGHFLQNFLSLK 280
>U23453-9|AAC46755.1| 727|Caenorhabditis elegans Hypothetical
protein B0252.1 protein.
Length = 727
Score = 27.5 bits (58), Expect = 8.4
Identities = 13/35 (37%), Positives = 21/35 (60%)
Frame = +1
Query: 79 FNSTKKLKYLFLFTYMLLKIVFTIENVQHVSPFIN 183
FNST+++KY F F IV T + ++ +S + N
Sbjct: 69 FNSTQQIKYDFYFGSNYSTIVTTNDLIKEISEWFN 103
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,070,178
Number of Sequences: 27780
Number of extensions: 303477
Number of successful extensions: 921
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 897
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 921
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1395683256
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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