Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30126
         (703 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q61BR1 Cluster: Putative uncharacterized protein CBG132...    52   2e-05
UniRef50_Q7RB75 Cluster: Ferredoxin NADP reductase, putative; n=...    36   0.73 
UniRef50_UPI00015B4E11 Cluster: PREDICTED: similar to conserved ...    33   9.0  
UniRef50_Q8KTR7 Cluster: Valine sensitive acetolactate synthase ...    33   9.0  

>UniRef50_Q61BR1 Cluster: Putative uncharacterized protein CBG13257;
           n=1; Caenorhabditis briggsae|Rep: Putative
           uncharacterized protein CBG13257 - Caenorhabditis
           briggsae
          Length = 1612

 Score = 51.6 bits (118), Expect = 2e-05
 Identities = 20/39 (51%), Positives = 28/39 (71%)
 Frame = -1

Query: 649 ISNVLDSIPVVGHVKGIVHYAVGDTEGGNNSMYQSTRTS 533
           +SN  D +P VGHVKG +H+  GD EGGN ++  +TRT+
Sbjct: 69  VSNFADGVPGVGHVKGAIHHIAGDHEGGNKAILAATRTT 107


>UniRef50_Q7RB75 Cluster: Ferredoxin NADP reductase, putative; n=5;
           Plasmodium|Rep: Ferredoxin NADP reductase, putative -
           Plasmodium yoelii yoelii
          Length = 382

 Score = 36.3 bits (80), Expect = 0.73
 Identities = 17/43 (39%), Positives = 22/43 (51%)
 Frame = -3

Query: 173 INCRRNDKNCGKESVRKSREKSCRNCSNTNTNASGVCSRRSKC 45
           +NC +ND NC K  V  + EK+  NC   N N      +R KC
Sbjct: 127 VNCEKNDVNCEKNDV--NCEKNDVNCEKNNVNCEKNNVKRKKC 167


>UniRef50_UPI00015B4E11 Cluster: PREDICTED: similar to conserved
            hypothetical protein; n=1; Nasonia vitripennis|Rep:
            PREDICTED: similar to conserved hypothetical protein -
            Nasonia vitripennis
          Length = 1174

 Score = 32.7 bits (71), Expect = 9.0
 Identities = 18/57 (31%), Positives = 27/57 (47%)
 Frame = -3

Query: 230  HCKKSCCNYWGGDD*EVSAINCRRNDKNCGKESVRKSREKSCRNCSNTNTNASGVCS 60
            H   +C N WGG    +   N    D + G +S   +  +SC +C N++ N  G CS
Sbjct: 891  HSSATCTNTWGGF---ICTCNPGFKDPHKGDQS---TSGRSCLSCPNSHCNNRGTCS 941


>UniRef50_Q8KTR7 Cluster: Valine sensitive acetolactate synthase III
           subunit; n=1; Candidatus Tremblaya princeps|Rep: Valine
           sensitive acetolactate synthase III subunit - Tremblaya
           princeps
          Length = 565

 Score = 32.7 bits (71), Expect = 9.0
 Identities = 13/32 (40%), Positives = 19/32 (59%)
 Frame = +1

Query: 337 RNPQKPLDFCLKQCLYLYLHLTQKYLQARS*P 432
           RN   PLD   + CLY+Y HL  +Y+ + + P
Sbjct: 182 RNHTAPLDVWSEPCLYVYAHLAARYIASAARP 213


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 560,193,327
Number of Sequences: 1657284
Number of extensions: 10165188
Number of successful extensions: 28575
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 27181
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28540
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 55785129165
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)