Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30126
         (703 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014297-4738|AAF57146.2|  214|Drosophila melanogaster CG15566-P...    31   1.5  
AE013599-3283|AAM71018.2| 2968|Drosophila melanogaster CG13492-P...    29   8.1  
AE013599-3282|AAF46766.2| 2931|Drosophila melanogaster CG13492-P...    29   8.1  

>AE014297-4738|AAF57146.2|  214|Drosophila melanogaster CG15566-PA
           protein.
          Length = 214

 Score = 31.1 bits (67), Expect = 1.5
 Identities = 15/44 (34%), Positives = 25/44 (56%)
 Frame = -3

Query: 179 SAINCRRNDKNCGKESVRKSREKSCRNCSNTNTNASGVCSRRSK 48
           S+ NC  N+ +CG   +R+S   S  N +  N NA+  C +++K
Sbjct: 55  SSNNCIANNNSCGGGGIRQSNPSS--NINFDNCNANVYCGQKAK 96


>AE013599-3283|AAM71018.2| 2968|Drosophila melanogaster CG13492-PB,
            isoform B protein.
          Length = 2968

 Score = 28.7 bits (61), Expect = 8.1
 Identities = 16/48 (33%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
 Frame = -3

Query: 218  SCCNYWGGDD*EVSAINCRRNDKNCGKE-SVRKSREKSCRNCSNTNTN 78
            S C  +  DD  V++++  R  + C  E +   S+  SCR CS  N N
Sbjct: 1213 SYCRTYSEDDACVTSLSNGRTRRGCQSELNCDASQAGSCRVCSEANCN 1260


>AE013599-3282|AAF46766.2| 2931|Drosophila melanogaster CG13492-PA,
            isoform A protein.
          Length = 2931

 Score = 28.7 bits (61), Expect = 8.1
 Identities = 16/48 (33%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
 Frame = -3

Query: 218  SCCNYWGGDD*EVSAINCRRNDKNCGKE-SVRKSREKSCRNCSNTNTN 78
            S C  +  DD  V++++  R  + C  E +   S+  SCR CS  N N
Sbjct: 1176 SYCRTYSEDDACVTSLSNGRTRRGCQSELNCDASQAGSCRVCSEANCN 1223


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,641,121
Number of Sequences: 53049
Number of extensions: 498734
Number of successful extensions: 1383
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1315
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1382
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3087795150
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)