Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV30124
(741 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY118476-1|AAM49845.1| 324|Drosophila melanogaster GM16085p pro... 176 2e-44
AE014296-830|AAF47886.2| 324|Drosophila melanogaster CG15014-PA... 176 2e-44
AY084212-1|AAL89950.1| 1211|Drosophila melanogaster SD08909p pro... 29 8.8
AY075386-1|AAL68224.1| 1294|Drosophila melanogaster LD24110p pro... 29 8.8
AE014296-1521|AAF50366.2| 1294|Drosophila melanogaster CG32030-P... 29 8.8
AE014296-1520|AAF50365.2| 1393|Drosophila melanogaster CG32030-P... 29 8.8
>AY118476-1|AAM49845.1| 324|Drosophila melanogaster GM16085p
protein.
Length = 324
Score = 176 bits (429), Expect = 2e-44
Identities = 93/221 (42%), Positives = 125/221 (56%), Gaps = 2/221 (0%)
Frame = +3
Query: 81 LEPGFKGFFCTCNFREKDCVKEVYNLLNEYASKLYPDLDVEQVPPSAVPXXXXXXXXXXX 260
L+PG +GFF TCN EK CV+E YNLLN YA LY E P P
Sbjct: 31 LQPGQRGFFATCNINEKACVRECYNLLNHYADILYGSEKPENEPEKKQPEEGAGGDAGED 90
Query: 261 XXXXXXX--IGDILRREVDSIKKNSQKSLRFKRFQVVETGASNCIFVKTNLPSPEELTTA 434
D E + K S R RFQ V+T +NC+F++T L P L
Sbjct: 91 DPKPAAGGTSDDDDDLEAAAAKCREMLSQRKMRFQNVDTNTTNCVFIRTQLEDPVALGKH 150
Query: 435 IIKDLIATRIQKTRHVMRLLPIMITCKANLPDIMESAGKLFDKYFLKEPTSFSVVFNKRF 614
II D+ T +R V+RL+PI + C+AN+PDI+ +AG+LFDK+FLKEPTS+ ++FN R+
Sbjct: 151 IINDIATTGKSMSRFVLRLVPIEVVCRANMPDIITAAGELFDKHFLKEPTSYGIIFNHRY 210
Query: 615 NNSVSRDLIIKELAELVVVKNRENKADLKIQVSAL*LKLLK 737
N + RD II +LAELV KN NK DLK ++ +++L+
Sbjct: 211 NQQIKRDQIITQLAELVNSKNVGNKVDLKEAKKSIIVEVLR 251
>AE014296-830|AAF47886.2| 324|Drosophila melanogaster CG15014-PA
protein.
Length = 324
Score = 176 bits (429), Expect = 2e-44
Identities = 93/221 (42%), Positives = 125/221 (56%), Gaps = 2/221 (0%)
Frame = +3
Query: 81 LEPGFKGFFCTCNFREKDCVKEVYNLLNEYASKLYPDLDVEQVPPSAVPXXXXXXXXXXX 260
L+PG +GFF TCN EK CV+E YNLLN YA LY E P P
Sbjct: 31 LQPGQRGFFATCNINEKACVRECYNLLNHYADILYGSEKPENEPEKKQPEEGAGGDAGED 90
Query: 261 XXXXXXX--IGDILRREVDSIKKNSQKSLRFKRFQVVETGASNCIFVKTNLPSPEELTTA 434
D E + K S R RFQ V+T +NC+F++T L P L
Sbjct: 91 DPKPAAGGTSDDDDDLEAAAAKCREMLSQRKMRFQNVDTNTTNCVFIRTQLEDPVALGKH 150
Query: 435 IIKDLIATRIQKTRHVMRLLPIMITCKANLPDIMESAGKLFDKYFLKEPTSFSVVFNKRF 614
II D+ T +R V+RL+PI + C+AN+PDI+ +AG+LFDK+FLKEPTS+ ++FN R+
Sbjct: 151 IINDIATTGKSMSRFVLRLVPIEVVCRANMPDIITAAGELFDKHFLKEPTSYGIIFNHRY 210
Query: 615 NNSVSRDLIIKELAELVVVKNRENKADLKIQVSAL*LKLLK 737
N + RD II +LAELV KN NK DLK ++ +++L+
Sbjct: 211 NQQIKRDQIITQLAELVNSKNVGNKVDLKEAKKSIIVEVLR 251
>AY084212-1|AAL89950.1| 1211|Drosophila melanogaster SD08909p
protein.
Length = 1211
Score = 28.7 bits (61), Expect = 8.8
Identities = 20/68 (29%), Positives = 32/68 (47%), Gaps = 2/68 (2%)
Frame = +3
Query: 300 REVDSIKKNSQKSLRFKRFQVVETGASNCIFVK-TNLPSPEELTTAIIK-DLIATRIQKT 473
R D + K Q+ + K V++ SN I + T LP P + TAI+K D +
Sbjct: 753 RAKDLMTKKQQELNKSKEIIVLDHKRSNAINIAITKLPPPRAIKTAILKMDATVVTREGI 812
Query: 474 RHVMRLLP 497
++ +LP
Sbjct: 813 DKLLNMLP 820
>AY075386-1|AAL68224.1| 1294|Drosophila melanogaster LD24110p protein.
Length = 1294
Score = 28.7 bits (61), Expect = 8.8
Identities = 20/68 (29%), Positives = 32/68 (47%), Gaps = 2/68 (2%)
Frame = +3
Query: 300 REVDSIKKNSQKSLRFKRFQVVETGASNCIFVK-TNLPSPEELTTAIIK-DLIATRIQKT 473
R D + K Q+ + K V++ SN I + T LP P + TAI+K D +
Sbjct: 935 RAKDLMTKKQQELNKSKEIIVLDHKRSNAINIAITKLPPPRAIKTAILKMDATVVTREGI 994
Query: 474 RHVMRLLP 497
++ +LP
Sbjct: 995 DKLLNMLP 1002
>AE014296-1521|AAF50366.2| 1294|Drosophila melanogaster CG32030-PB,
isoform B protein.
Length = 1294
Score = 28.7 bits (61), Expect = 8.8
Identities = 20/68 (29%), Positives = 32/68 (47%), Gaps = 2/68 (2%)
Frame = +3
Query: 300 REVDSIKKNSQKSLRFKRFQVVETGASNCIFVK-TNLPSPEELTTAIIK-DLIATRIQKT 473
R D + K Q+ + K V++ SN I + T LP P + TAI+K D +
Sbjct: 935 RAKDLMTKKQQELNKSKEIIVLDHKRSNAINIAITKLPPPRAIKTAILKMDATVVTREGI 994
Query: 474 RHVMRLLP 497
++ +LP
Sbjct: 995 DKLLNMLP 1002
>AE014296-1520|AAF50365.2| 1393|Drosophila melanogaster CG32030-PA,
isoform A protein.
Length = 1393
Score = 28.7 bits (61), Expect = 8.8
Identities = 20/68 (29%), Positives = 32/68 (47%), Gaps = 2/68 (2%)
Frame = +3
Query: 300 REVDSIKKNSQKSLRFKRFQVVETGASNCIFVK-TNLPSPEELTTAIIK-DLIATRIQKT 473
R D + K Q+ + K V++ SN I + T LP P + TAI+K D +
Sbjct: 935 RAKDLMTKKQQELNKSKEIIVLDHKRSNAINIAITKLPPPRAIKTAILKMDATVVTREGI 994
Query: 474 RHVMRLLP 497
++ +LP
Sbjct: 995 DKLLNMLP 1002
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,036,946
Number of Sequences: 53049
Number of extensions: 552963
Number of successful extensions: 1247
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1209
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1245
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3355404063
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -