BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV30122
(722 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY058602-1|AAL13831.1| 1257|Drosophila melanogaster LD29335p pro... 31 1.2
AY058576-1|AAL13805.1| 1602|Drosophila melanogaster LD27111p pro... 31 1.2
AE013599-965|AAF58877.2| 1877|Drosophila melanogaster CG30007-PA... 31 1.2
AE013599-964|AAF58876.2| 1693|Drosophila melanogaster CG30007-PB... 31 1.2
AY051954-1|AAK93378.1| 379|Drosophila melanogaster LD42284p pro... 30 3.7
AE014134-764|AAF50989.1| 379|Drosophila melanogaster CG15634-PA... 30 3.7
>AY058602-1|AAL13831.1| 1257|Drosophila melanogaster LD29335p
protein.
Length = 1257
Score = 31.5 bits (68), Expect = 1.2
Identities = 13/36 (36%), Positives = 19/36 (52%)
Frame = -2
Query: 328 EPLSDFYLHSQSCGPNDNSRRRPKHVISDPSDPLTV 221
EP+ + L + CG D +P ++S PS P TV
Sbjct: 745 EPVIERILLKKICGVKDGDENKPTEIVSIPSSPSTV 780
>AY058576-1|AAL13805.1| 1602|Drosophila melanogaster LD27111p protein.
Length = 1602
Score = 31.5 bits (68), Expect = 1.2
Identities = 13/36 (36%), Positives = 19/36 (52%)
Frame = -2
Query: 328 EPLSDFYLHSQSCGPNDNSRRRPKHVISDPSDPLTV 221
EP+ + L + CG D +P ++S PS P TV
Sbjct: 1366 EPVIERILLKKICGVKDGDENKPTEIVSIPSSPSTV 1401
>AE013599-965|AAF58877.2| 1877|Drosophila melanogaster CG30007-PA,
isoform A protein.
Length = 1877
Score = 31.5 bits (68), Expect = 1.2
Identities = 13/36 (36%), Positives = 19/36 (52%)
Frame = -2
Query: 328 EPLSDFYLHSQSCGPNDNSRRRPKHVISDPSDPLTV 221
EP+ + L + CG D +P ++S PS P TV
Sbjct: 1365 EPVIERILLKKICGVKDGDENKPTEIVSIPSSPSTV 1400
>AE013599-964|AAF58876.2| 1693|Drosophila melanogaster CG30007-PB,
isoform B protein.
Length = 1693
Score = 31.5 bits (68), Expect = 1.2
Identities = 13/36 (36%), Positives = 19/36 (52%)
Frame = -2
Query: 328 EPLSDFYLHSQSCGPNDNSRRRPKHVISDPSDPLTV 221
EP+ + L + CG D +P ++S PS P TV
Sbjct: 1366 EPVIERILLKKICGVKDGDENKPTEIVSIPSSPSTV 1401
>AY051954-1|AAK93378.1| 379|Drosophila melanogaster LD42284p
protein.
Length = 379
Score = 29.9 bits (64), Expect = 3.7
Identities = 19/67 (28%), Positives = 31/67 (46%), Gaps = 1/67 (1%)
Frame = -1
Query: 587 PDFSNDILFLLLPTCCSVVTGFYRYHDINAVSYLET*GRSFNLT*FEESITA-PS*KYSE 411
P+ + L L P C + + Y D L RSF+L F++++ A P +
Sbjct: 150 PELKGNPLVRLAPGCIAHILYAYESRDYMEKILLHLKARSFDLA-FDDNLEAEPEAMNDD 208
Query: 410 SWLLSQY 390
+W+L QY
Sbjct: 209 TWMLVQY 215
>AE014134-764|AAF50989.1| 379|Drosophila melanogaster CG15634-PA
protein.
Length = 379
Score = 29.9 bits (64), Expect = 3.7
Identities = 19/67 (28%), Positives = 31/67 (46%), Gaps = 1/67 (1%)
Frame = -1
Query: 587 PDFSNDILFLLLPTCCSVVTGFYRYHDINAVSYLET*GRSFNLT*FEESITA-PS*KYSE 411
P+ + L L P C + + Y D L RSF+L F++++ A P +
Sbjct: 150 PELKGNPLVRLAPGCIAHILYAYESRDYMEKILLHLKARSFDLA-FDDNLEAEPEAMNDD 208
Query: 410 SWLLSQY 390
+W+L QY
Sbjct: 209 TWMLVQY 215
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,614,771
Number of Sequences: 53049
Number of extensions: 668070
Number of successful extensions: 1602
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1558
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1602
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3231892257
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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