BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= maV30122 (722 letters) Database: fruitfly 53,049 sequences; 24,988,368 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value AY058602-1|AAL13831.1| 1257|Drosophila melanogaster LD29335p pro... 31 1.2 AY058576-1|AAL13805.1| 1602|Drosophila melanogaster LD27111p pro... 31 1.2 AE013599-965|AAF58877.2| 1877|Drosophila melanogaster CG30007-PA... 31 1.2 AE013599-964|AAF58876.2| 1693|Drosophila melanogaster CG30007-PB... 31 1.2 AY051954-1|AAK93378.1| 379|Drosophila melanogaster LD42284p pro... 30 3.7 AE014134-764|AAF50989.1| 379|Drosophila melanogaster CG15634-PA... 30 3.7 >AY058602-1|AAL13831.1| 1257|Drosophila melanogaster LD29335p protein. Length = 1257 Score = 31.5 bits (68), Expect = 1.2 Identities = 13/36 (36%), Positives = 19/36 (52%) Frame = -2 Query: 328 EPLSDFYLHSQSCGPNDNSRRRPKHVISDPSDPLTV 221 EP+ + L + CG D +P ++S PS P TV Sbjct: 745 EPVIERILLKKICGVKDGDENKPTEIVSIPSSPSTV 780 >AY058576-1|AAL13805.1| 1602|Drosophila melanogaster LD27111p protein. Length = 1602 Score = 31.5 bits (68), Expect = 1.2 Identities = 13/36 (36%), Positives = 19/36 (52%) Frame = -2 Query: 328 EPLSDFYLHSQSCGPNDNSRRRPKHVISDPSDPLTV 221 EP+ + L + CG D +P ++S PS P TV Sbjct: 1366 EPVIERILLKKICGVKDGDENKPTEIVSIPSSPSTV 1401 >AE013599-965|AAF58877.2| 1877|Drosophila melanogaster CG30007-PA, isoform A protein. Length = 1877 Score = 31.5 bits (68), Expect = 1.2 Identities = 13/36 (36%), Positives = 19/36 (52%) Frame = -2 Query: 328 EPLSDFYLHSQSCGPNDNSRRRPKHVISDPSDPLTV 221 EP+ + L + CG D +P ++S PS P TV Sbjct: 1365 EPVIERILLKKICGVKDGDENKPTEIVSIPSSPSTV 1400 >AE013599-964|AAF58876.2| 1693|Drosophila melanogaster CG30007-PB, isoform B protein. Length = 1693 Score = 31.5 bits (68), Expect = 1.2 Identities = 13/36 (36%), Positives = 19/36 (52%) Frame = -2 Query: 328 EPLSDFYLHSQSCGPNDNSRRRPKHVISDPSDPLTV 221 EP+ + L + CG D +P ++S PS P TV Sbjct: 1366 EPVIERILLKKICGVKDGDENKPTEIVSIPSSPSTV 1401 >AY051954-1|AAK93378.1| 379|Drosophila melanogaster LD42284p protein. Length = 379 Score = 29.9 bits (64), Expect = 3.7 Identities = 19/67 (28%), Positives = 31/67 (46%), Gaps = 1/67 (1%) Frame = -1 Query: 587 PDFSNDILFLLLPTCCSVVTGFYRYHDINAVSYLET*GRSFNLT*FEESITA-PS*KYSE 411 P+ + L L P C + + Y D L RSF+L F++++ A P + Sbjct: 150 PELKGNPLVRLAPGCIAHILYAYESRDYMEKILLHLKARSFDLA-FDDNLEAEPEAMNDD 208 Query: 410 SWLLSQY 390 +W+L QY Sbjct: 209 TWMLVQY 215 >AE014134-764|AAF50989.1| 379|Drosophila melanogaster CG15634-PA protein. Length = 379 Score = 29.9 bits (64), Expect = 3.7 Identities = 19/67 (28%), Positives = 31/67 (46%), Gaps = 1/67 (1%) Frame = -1 Query: 587 PDFSNDILFLLLPTCCSVVTGFYRYHDINAVSYLET*GRSFNLT*FEESITA-PS*KYSE 411 P+ + L L P C + + Y D L RSF+L F++++ A P + Sbjct: 150 PELKGNPLVRLAPGCIAHILYAYESRDYMEKILLHLKARSFDLA-FDDNLEAEPEAMNDD 208 Query: 410 SWLLSQY 390 +W+L QY Sbjct: 209 TWMLVQY 215 Database: fruitfly Posted date: Oct 23, 2007 1:17 PM Number of letters in database: 24,988,368 Number of sequences in database: 53,049 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 31,614,771 Number of Sequences: 53049 Number of extensions: 668070 Number of successful extensions: 1602 Number of sequences better than 10.0: 6 Number of HSP's better than 10.0 without gapping: 1558 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1602 length of database: 24,988,368 effective HSP length: 83 effective length of database: 20,585,301 effective search space used: 3231892257 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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