Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30122
         (722 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U29097-10|AAA68414.1|  348|Caenorhabditis elegans Serpentine rec...    28   7.8  
AF000265-7|AAB52941.1|  893|Caenorhabditis elegans Hypothetical ...    28   7.8  

>U29097-10|AAA68414.1|  348|Caenorhabditis elegans Serpentine
           receptor, class a (alpha)protein 29 protein.
          Length = 348

 Score = 27.9 bits (59), Expect = 7.8
 Identities = 10/28 (35%), Positives = 17/28 (60%)
 Frame = -1

Query: 569 ILFLLLPTCCSVVTGFYRYHDINAVSYL 486
           I+FL+L   C +   F+ +HD +  SY+
Sbjct: 147 IVFLILQIICPIAIQFWTFHDSDYTSYV 174


>AF000265-7|AAB52941.1|  893|Caenorhabditis elegans Hypothetical
           protein C18E3.3 protein.
          Length = 893

 Score = 27.9 bits (59), Expect = 7.8
 Identities = 13/37 (35%), Positives = 19/37 (51%)
 Frame = -2

Query: 331 PEPLSDFYLHSQSCGPNDNSRRRPKHVISDPSDPLTV 221
           P P+S F     + G  D++R  P  VIS P+   T+
Sbjct: 408 PRPISIFNNPRLNSGDEDSTRNSPSSVISPPTSVFTM 444


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,321,578
Number of Sequences: 27780
Number of extensions: 348646
Number of successful extensions: 879
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 861
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 879
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1697838058
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)