Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30121
         (612 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z69735-1|CAA93623.1|  162|Tribolium castaneum initiation factor ...    22   3.5  
EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    22   3.5  
AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory recept...    21   6.2  
AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory recept...    21   6.2  

>Z69735-1|CAA93623.1|  162|Tribolium castaneum initiation factor
           5-like protein protein.
          Length = 162

 Score = 22.2 bits (45), Expect = 3.5
 Identities = 10/36 (27%), Positives = 18/36 (50%)
 Frame = +1

Query: 256 LPSHIKVNLPALSPTMESGSIVSWEKKEGDKLSEGD 363
           L + I  N P L+P ++  S+   ++ +  K   GD
Sbjct: 51  LVTFILKNPPNLNPAVQGSSLTEGKRSKRSKRPNGD 86


>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
           beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 22.2 bits (45), Expect = 3.5
 Identities = 15/44 (34%), Positives = 19/44 (43%), Gaps = 3/44 (6%)
 Frame = +1

Query: 220 PQWTVQMRYYSSLPSHIKVNLPALS---PTMESGSIVSWEKKEG 342
           PQWT Q         HIK  +P +S    +M  GS   W +  G
Sbjct: 54  PQWTWQCINQRCERRHIKGAIPVVSLSTCSMLCGSTQLWPQPTG 97


>AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory receptor
           candidate 18 protein.
          Length = 387

 Score = 21.4 bits (43), Expect = 6.2
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = +3

Query: 102 WS*ESYTVEYYEVH*Y 149
           WS +S  VEY+ +H Y
Sbjct: 153 WSKKSKQVEYFLIHWY 168


>AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory receptor
           candidate 17 protein.
          Length = 372

 Score = 21.4 bits (43), Expect = 6.2
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = +3

Query: 102 WS*ESYTVEYYEVH*Y 149
           WS +S  VEY+ +H Y
Sbjct: 153 WSKKSKQVEYFLIHWY 168


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 153,528
Number of Sequences: 336
Number of extensions: 3444
Number of successful extensions: 12
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15561709
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)