Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV30121
(612 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_01_0041 + 279583-281622,281724-282047,282315-282443,282526-28... 118 4e-27
06_03_0163 - 17380601-17380710,17380796-17380856,17381076-173811... 117 8e-27
07_03_0044 - 12758606-12758676,12758765-12758860,12759197-127592... 116 2e-26
06_01_0037 - 369498-369568,369668-369760,369889-369991,370061-37... 94 9e-20
08_02_0759 - 20851828-20851932,20852190-20852285,20853231-208533... 84 1e-16
12_01_0526 - 4171313-4171417,4171514-4171597,4171688-4171758,417... 80 1e-15
09_04_0081 - 14400293-14400397,14400953-14401036,14401144-144012... 73 2e-13
04_03_0767 + 19389337-19389381,19390586-19390643,19390720-193907... 48 4e-06
02_03_0404 + 18648632-18648669,18649319-18649379,18649449-186494... 47 1e-05
01_03_0030 - 11787280-11787393,11787487-11787714,11788828-117889... 33 0.13
10_03_0040 - 7307108-7307564,7307611-7307915 31 0.95
12_02_1157 + 26565040-26565081,26565189-26565262,26565343-265654... 28 5.1
03_04_0006 + 16257288-16259522 28 5.1
02_05_1303 + 35572403-35572624,35572744-35572860,35572987-355731... 28 6.7
10_05_0091 - 9085506-9085758,9085838-9085992,9086091-9086132,908... 27 8.9
04_01_0159 - 1824343-1824405,1824485-1824595,1825282-1825448,182... 27 8.9
>02_01_0041 + 279583-281622,281724-282047,282315-282443,282526-282648,
282768-282923,283224-283349,283426-283560,283815-283942,
284037-284148,284233-284547,284655-284771,284871-285166,
285252-285783,287980-288082,288808-288881,288965-289062,
289340-289380,289977-290032,290170-290244,290377-290469,
290602-290850,290930-291002,291681-291766,291853-291938,
292067-292142,292280-292347,292430-292496,292570-292665,
292741-292843,293214-293309,293396-293466
Length = 2047
Score = 118 bits (284), Expect = 4e-27
Identities = 54/115 (46%), Positives = 79/115 (68%), Gaps = 2/115 (1%)
Frame = +1
Query: 250 SSLPSHIKVNLPALSPTMESGSIVSWEKKEGDKLSEGDLLCEIETDKATMGFETPEEGYL 429
+ LP H ++ +P+LSPTM G+I W KKEGDK+S G++LCE+ETDKAT+ E EEGYL
Sbjct: 1616 ADLPPHQEIGMPSLSPTMTEGNIARWLKKEGDKVSPGEVLCEVETDKATVEMECMEEGYL 1675
Query: 430 AKILIPAGTKGVPVGKLLCIIVGDQNDVAAFKDFKDDSS--PATPQKRASQDKAA 588
AKI+ G K + VG+++ + V ++ D+ FKD+K +S PA P + +Q + A
Sbjct: 1676 AKIIHGDGAKEIKVGEIIAVTVEEEGDLEKFKDYKPSTSAAPAAPSEPKAQPEPA 1730
>06_03_0163 -
17380601-17380710,17380796-17380856,17381076-17381150,
17381538-17381600,17381679-17381755,17382432-17382515,
17382610-17382654,17382729-17382789,17383658-17384053,
17384220-17384289,17387010-17387083,17387202-17387246,
17387342-17387391,17387846-17387947,17388587-17388620,
17388681-17388758,17388915-17388965,17389082-17389085,
17389182-17389256,17389530-17389624
Length = 549
Score = 117 bits (281), Expect = 8e-27
Identities = 62/143 (43%), Positives = 88/143 (61%)
Frame = +1
Query: 145 STELAKRKVTNKLLEYTQNQAVLSVPQWTVQMRYYSSLPSHIKVNLPALSPTMESGSIVS 324
ST + ++ + L Q QA+ +V + +R + P H+ V +PALSPTM G+I
Sbjct: 111 STAIGPARLLWQQLIGLQQQAMGTVSACSSWIRPTARFPPHLVVGMPALSPTMNQGNIAK 170
Query: 325 WEKKEGDKLSEGDLLCEIETDKATMGFETPEEGYLAKILIPAGTKGVPVGKLLCIIVGDQ 504
W K+EG+K+ GD++CEIETDKAT+ FE+ EEGYLAKIL P G+K V VG+ + + V D
Sbjct: 171 WRKQEGEKIEVGDVICEIETDKATLEFESLEEGYLAKILAPEGSKDVQVGQPIAVTVEDL 230
Query: 505 NDVAAFKDFKDDSSPATPQKRAS 573
D+ K+ D+S QK S
Sbjct: 231 EDI---KNIPADASFGGEQKEQS 250
>07_03_0044 -
12758606-12758676,12758765-12758860,12759197-12759299,
12759379-12759474,12759537-12759603,12759682-12759749,
12759898-12759973,12760112-12760197,12760285-12760361,
12761461-12761533,12761627-12761875,12761997-12762089,
12762218-12762292,12762661-12762716,12763473-12763513,
12763907-12764001,12764085-12764158,12765052-12765145,
12765484-12765519
Length = 541
Score = 116 bits (278), Expect = 2e-26
Identities = 51/113 (45%), Positives = 78/113 (69%), Gaps = 2/113 (1%)
Frame = +1
Query: 250 SSLPSHIKVNLPALSPTMESGSIVSWEKKEGDKLSEGDLLCEIETDKATMGFETPEEGYL 429
+ LP H ++ +P+LSPTM G+I W KKEGDK+S G++LCE+ETDKAT+ E EEGYL
Sbjct: 113 ADLPPHQEIGMPSLSPTMTEGNIARWLKKEGDKVSPGEVLCEVETDKATVEMECMEEGYL 172
Query: 430 AKILIPAGTKGVPVGKLLCIIVGDQNDVAAFKDFKDD--SSPATPQKRASQDK 582
AKI+ G+K + VG+++ + V ++ D+ FKD+K ++P P + +Q +
Sbjct: 173 AKIIHGDGSKEIKVGEIIAVTVEEEGDIKKFKDYKPSTLAAPVAPSELKAQSE 225
>06_01_0037 -
369498-369568,369668-369760,369889-369991,370061-370156,
370227-370293,370379-370446,370606-370681,370890-370975,
371065-371150,371337-371409,371490-371735,371845-371937,
372045-372119,372496-372540,372631-372708,372805-372921,
373865-373894
Length = 500
Score = 93.9 bits (223), Expect = 9e-20
Identities = 41/79 (51%), Positives = 57/79 (72%)
Frame = +1
Query: 310 GSIVSWEKKEGDKLSEGDLLCEIETDKATMGFETPEEGYLAKILIPAGTKGVPVGKLLCI 489
G+I W KKEGDK+S G++LCE+ETDKAT+ E EEGYLAKI+ G K + VG+++ +
Sbjct: 91 GNIARWVKKEGDKVSPGEVLCEVETDKATVEMECMEEGYLAKIIHGDGAKEIKVGEIIAV 150
Query: 490 IVGDQNDVAAFKDFKDDSS 546
V ++ D+ FKD+K SS
Sbjct: 151 TVEEEEDIGKFKDYKAPSS 169
>08_02_0759 -
20851828-20851932,20852190-20852285,20853231-20853314,
20853411-20853481,20853568-20853655,20853745-20853936,
20854044-20854931
Length = 507
Score = 83.8 bits (198), Expect = 1e-16
Identities = 42/112 (37%), Positives = 65/112 (58%)
Frame = +1
Query: 271 KVNLPALSPTMESGSIVSWEKKEGDKLSEGDLLCEIETDKATMGFETPEEGYLAKILIPA 450
++ +PALS TM G IVSW EGD++++GD + +E+DKA M ET +G +A +L+PA
Sbjct: 48 EIFMPALSSTMTEGKIVSWSAAEGDRVAKGDAVVVVESDKADMDVETFHDGIVAAVLVPA 107
Query: 451 GTKGVPVGKLLCIIVGDQNDVAAFKDFKDDSSPATPQKRASQDKAACRTGPP 606
G + PVG + ++ ++D+ A + S A PQ+ AA PP
Sbjct: 108 G-ESAPVGAPIALLAESEDDLQAALAKAQELSKAHPQQAPPPSDAAAPPPPP 158
>12_01_0526 -
4171313-4171417,4171514-4171597,4171688-4171758,
4171814-4171891,4174482-4174569,4174659-4174850,
4174939-4175802
Length = 493
Score = 80.2 bits (189), Expect = 1e-15
Identities = 41/115 (35%), Positives = 66/115 (57%), Gaps = 3/115 (2%)
Frame = +1
Query: 271 KVNLPALSPTMESGSIVSWEKKEGDKLSEGDLLCEIETDKATMGFETPEEGYLAKILIPA 450
++ +PALS TM G IVSW EGD+L++GD + +E+DKA M ET +G+LA +L+PA
Sbjct: 51 EIFMPALSSTMTEGKIVSWTASEGDRLAKGDPVVVVESDKADMDVETFHDGFLAAVLVPA 110
Query: 451 GTKGVPVGKLLCIIVGDQNDVAAFKD---FKDDSSPATPQKRASQDKAACRTGPP 606
G + PVG + ++ ++++ A + SS ++P Q+ PP
Sbjct: 111 G-ESAPVGSAIALLAESEDEIPAAQSKAASLSSSSSSSPPPPPPQESTPPPPPPP 164
>09_04_0081 -
14400293-14400397,14400953-14401036,14401144-14401214,
14401293-14401380,14401487-14401678,14401772-14402704
Length = 490
Score = 72.5 bits (170), Expect = 2e-13
Identities = 34/82 (41%), Positives = 54/82 (65%)
Frame = +1
Query: 271 KVNLPALSPTMESGSIVSWEKKEGDKLSEGDLLCEIETDKATMGFETPEEGYLAKILIPA 450
++ +PALS TM G IVSW EGD++++GD + +E+DKA M ET +G +A +L+PA
Sbjct: 43 EIFMPALSSTMTEGRIVSWTAAEGDRVAKGDPVVVVESDKADMDVETFYDGIVAVVLVPA 102
Query: 451 GTKGVPVGKLLCIIVGDQNDVA 516
G + PVG + ++ + +VA
Sbjct: 103 G-ESAPVGAPIALLAESEEEVA 123
>04_03_0767 +
19389337-19389381,19390586-19390643,19390720-19390759,
19390859-19390926,19391007-19391081,19391161-19391216,
19391317-19391361,19391450-19391701,19391787-19391881,
19392395-19392485,19392578-19392688,19392788-19392982,
19393071-19393262
Length = 440
Score = 48.4 bits (110), Expect = 4e-06
Identities = 26/105 (24%), Positives = 50/105 (47%)
Frame = +1
Query: 268 IKVNLPALSPTMESGSIVSWEKKEGDKLSEGDLLCEIETDKATMGFETPEEGYLAKILIP 447
++ +P + ++ G++ ++ KK GD++ + + +IETDK T+ +PE G + K +
Sbjct: 74 VEAVVPFMGESVTDGTLANFLKKPGDRVEADEPIAQIETDKVTIDVASPEAGVIEKFIAS 133
Query: 448 AGTKGVPVGKLLCIIVGDQNDVAAFKDFKDDSSPATPQKRASQDK 582
G P G + II +DS+P +A + K
Sbjct: 134 EGDTVTP-GTKVAIISKSAAPAETHVAPSEDSTPKETPPKAEETK 177
>02_03_0404 +
18648632-18648669,18649319-18649379,18649449-18649476,
18649787-18649861,18649929-18649984,18650085-18650129,
18650224-18650475,18650586-18650680,18651114-18651204,
18651356-18651466,18651556-18651750,18651827-18652018
Length = 412
Score = 46.8 bits (106), Expect = 1e-05
Identities = 31/125 (24%), Positives = 53/125 (42%)
Frame = +1
Query: 232 VQMRYYSSLPSHIKVNLPALSPTMESGSIVSWEKKEGDKLSEGDLLCEIETDKATMGFET 411
V M + L + +P + ++ G++ ++ KK GD++ + + +IETDK TM +
Sbjct: 34 VFMDAHCQLGDLVDAVVPFMGESITDGTLATFLKKPGDRVEADEPIAQIETDKVTMDVAS 93
Query: 412 PEEGYLAKILIPAGTKGVPVGKLLCIIVGDQNDVAAFKDFKDDSSPATPQKRASQDKAAC 591
PE G + K + G P G + II +D+S K S +
Sbjct: 94 PEAGIIEKFVASEGGIVTP-GVKVAIISKSAAQSKTHTQSSEDTSQKHSTKPPSTKENKV 152
Query: 592 RTGPP 606
PP
Sbjct: 153 EAKPP 157
>01_03_0030 -
11787280-11787393,11787487-11787714,11788828-11788916,
11789516-11789763,11789858-11790146,11790295-11790454,
11791228-11791404
Length = 434
Score = 33.5 bits (73), Expect = 0.13
Identities = 14/41 (34%), Positives = 26/41 (63%)
Frame = +1
Query: 316 IVSWEKKEGDKLSEGDLLCEIETDKATMGFETPEEGYLAKI 438
++ W EGD++ E LCE+++DKAT+ + +G + +I
Sbjct: 52 LLRWFVTEGDQVDEFQRLCEVQSDKATIEITSRFKGKVHQI 92
>10_03_0040 - 7307108-7307564,7307611-7307915
Length = 253
Score = 30.7 bits (66), Expect = 0.95
Identities = 12/32 (37%), Positives = 22/32 (68%)
Frame = +1
Query: 217 VPQWTVQMRYYSSLPSHIKVNLPALSPTMESG 312
+PQW + + YSS PS++++ L +L+ + SG
Sbjct: 193 LPQWRRRQQDYSSTPSNLQLRLGSLTMVISSG 224
>12_02_1157 +
26565040-26565081,26565189-26565262,26565343-26565460,
26565547-26565617,26565704-26565869,26565946-26566145,
26566669-26566880,26567404-26567522,26567952-26568053,
26568144-26568253,26568340-26568427,26568574-26568606,
26568635-26568834,26568916-26569120
Length = 579
Score = 28.3 bits (60), Expect = 5.1
Identities = 14/50 (28%), Positives = 25/50 (50%)
Frame = +1
Query: 328 EKKEGDKLSEGDLLCEIETDKATMGFETPEEGYLAKILIPAGTKGVPVGK 477
+++ DK + L D+A+ GF PE+ ++K + T+ PV K
Sbjct: 19 KRRASDKPANDQSLHSAAFDRASNGFRNPEQSKISKYISTRVTEVFPVKK 68
>03_04_0006 + 16257288-16259522
Length = 744
Score = 28.3 bits (60), Expect = 5.1
Identities = 17/57 (29%), Positives = 30/57 (52%)
Frame = +1
Query: 283 PALSPTMESGSIVSWEKKEGDKLSEGDLLCEIETDKATMGFETPEEGYLAKILIPAG 453
PA+SP+ + ++ SW+ K G L +G++ ++ TD M P G ++ AG
Sbjct: 193 PAVSPSGKRVAVASWQGKPG--LWDGEIE-DLRTDIYVMNVHKPPLGRTGPVVKNAG 246
>02_05_1303 +
35572403-35572624,35572744-35572860,35572987-35573112,
35573217-35573279,35573837-35573944,35574587-35574664,
35574772-35574864,35575206-35575292,35575429-35575530,
35575617-35575736,35575839-35575901,35575974-35576119,
35576203-35576296,35576399-35576457,35576568-35576607,
35576694-35576785,35576877-35576946,35578172-35578333,
35578477-35578703,35578863-35579070,35579173-35579258,
35579450-35579541,35579674-35579870
Length = 883
Score = 27.9 bits (59), Expect = 6.7
Identities = 11/43 (25%), Positives = 21/43 (48%)
Frame = +1
Query: 220 PQWTVQMRYYSSLPSHIKVNLPALSPTMESGSIVSWEKKEGDK 348
P W + M+ Y PS+ ++ +P L+ + G+ + E K
Sbjct: 325 PPWLINMQRYGPPPSYPQLKIPGLNAPIPPGASFGYRPGEWGK 367
>10_05_0091 -
9085506-9085758,9085838-9085992,9086091-9086132,
9086379-9086921,9087003-9087287,9087332-9087463,
9087542-9087729,9088186-9088240
Length = 550
Score = 27.5 bits (58), Expect = 8.9
Identities = 23/78 (29%), Positives = 37/78 (47%), Gaps = 1/78 (1%)
Frame = +1
Query: 307 SGSIVSWEKKEGDKLSEGDLLCEIETDKATMGFETPE-EGYLAKILIPAGTKGVPVGKLL 483
S +V +K+E K G+L E + KA PE E + +K+L+ + G VG L
Sbjct: 368 SPPLVKGQKRERGKGKVGELAPEPKRGKAATSMPDPEVEHWSSKMLLLSRRLGNQVGFLD 427
Query: 484 CIIVGDQNDVAAFKDFKD 537
+V + N +F + D
Sbjct: 428 PSMVNEVNLRQSFTEVVD 445
>04_01_0159 -
1824343-1824405,1824485-1824595,1825282-1825448,
1825853-1826029,1826404-1826656
Length = 256
Score = 27.5 bits (58), Expect = 8.9
Identities = 17/47 (36%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Frame = +1
Query: 259 PSHIKVNLPA-LSPTMESGSIVSWEKKEGDKLSEGDLLCEIETDKAT 396
P + N+ A P M +GSIV + + D+LC+IET KA+
Sbjct: 80 PPAFRGNVKARYQPVMFNGSIVYCRTPSEVEKATRDILCKIETMKAS 126
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,202,764
Number of Sequences: 37544
Number of extensions: 353154
Number of successful extensions: 932
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 890
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 928
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1466594128
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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