Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV30121
(612 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g52200.1 68416.m05733 dihydrolipoamide S-acetyltransferase, p... 117 5e-27
At3g13930.1 68416.m01759 dihydrolipoamide S-acetyltransferase, p... 117 5e-27
At1g54220.1 68414.m06182 dihydrolipoamide S-acetyltransferase, p... 116 2e-26
At1g34430.1 68414.m04277 dihydrolipoamide S-acetyltransferase, p... 75 3e-14
At3g25860.1 68416.m03222 dihydrolipoamide S-acetyltransferase (L... 69 2e-12
At5g55070.1 68418.m06864 2-oxoacid dehydrogenase family protein ... 45 3e-05
At3g06850.2 68416.m00813 branched chain alpha-keto acid dehydrog... 38 0.005
At3g06850.1 68416.m00812 branched chain alpha-keto acid dehydrog... 38 0.005
At4g19515.1 68417.m02871 disease resistance family protein simil... 31 0.60
At5g15530.1 68418.m01818 biotin carboxyl carrier protein 2 (BCCP... 30 1.4
At3g15690.1 68416.m01988 biotin carboxyl carrier protein of acet... 29 2.4
At5g57550.1 68418.m07190 xyloglucan:xyloglucosyl transferase / x... 29 3.2
At5g23110.1 68418.m02703 zinc finger (C3HC4-type RING finger) fa... 29 3.2
At3g15690.2 68416.m01989 biotin carboxyl carrier protein of acet... 29 3.2
At4g38590.1 68417.m05462 glycosyl hydrolase family 35 protein si... 28 4.2
At1g66280.1 68414.m07527 glycosyl hydrolase family 1 protein con... 28 4.2
At1g66270.2 68414.m07524 beta-glucosidase (PSR3.2) nearly identi... 28 4.2
At1g66270.1 68414.m07523 beta-glucosidase (PSR3.2) nearly identi... 28 4.2
At5g09790.1 68418.m01133 PHD finger family protein / SET domain-... 28 5.6
At1g68270.1 68414.m07798 AMP-dependent synthetase and ligase fam... 28 5.6
At5g16390.1 68418.m01915 biotin carboxyl carrier protein 1 (BCCP... 27 7.4
At3g09260.1 68416.m01100 glycosyl hydrolase family 1 protein con... 27 7.4
At2g31190.1 68415.m03809 expressed protein contains Pfam domain,... 27 7.4
At1g65880.1 68414.m07476 AMP-dependent synthetase and ligase fam... 27 7.4
At1g52670.1 68414.m05947 biotin/lipoyl attachment domain-contain... 27 7.4
At5g16720.1 68418.m01958 expressed protein contains Pfam profile... 27 9.8
At3g08730.1 68416.m01015 serine/threonine protein kinase (PK1) (... 27 9.8
At3g08720.2 68416.m01014 serine/threonine protein kinase (PK19) ... 27 9.8
At3g08720.1 68416.m01013 serine/threonine protein kinase (PK19) ... 27 9.8
At2g47750.1 68415.m05961 auxin-responsive GH3 family protein sim... 27 9.8
>At3g52200.1 68416.m05733 dihydrolipoamide S-acetyltransferase,
putative similar to dihydrolipoamide acetyltransferase
(E2) subunit of PDC [Arabidopsis thaliana] GI:559395;
contains Pfam profiles PF00198: 2-oxo acid
dehydrogenases acyltransferase (catalytic domain),
PF00364: Biotin-requiring enzyme, PF02817: e3 binding
domain; supporting cDNA
gi|5881964|gb|AF066080.1|AF066080
Length = 637
Score = 117 bits (282), Expect = 5e-27
Identities = 56/99 (56%), Positives = 69/99 (69%)
Frame = +1
Query: 250 SSLPSHIKVNLPALSPTMESGSIVSWEKKEGDKLSEGDLLCEIETDKATMGFETPEEGYL 429
S LP H+ + +PALSPTM G+I W KKEGDK+ GD++ EIETDKAT+ FE+ EEGYL
Sbjct: 207 SDLPPHVVLEMPALSPTMNQGNIAKWWKKEGDKIEVGDVIGEIETDKATLEFESLEEGYL 266
Query: 430 AKILIPAGTKGVPVGKLLCIIVGDQNDVAAFKDFKDDSS 546
AKILIP G+K V VGK + +IV D + A K SS
Sbjct: 267 AKILIPEGSKDVAVGKPIALIVEDAESIEAIKSSSAGSS 305
Score = 106 bits (254), Expect = 1e-23
Identities = 54/125 (43%), Positives = 83/125 (66%), Gaps = 1/125 (0%)
Frame = +1
Query: 142 ISTELAKRKVTNKLLEYTQNQAVLSVPQWTVQMRYYSSLP-SHIKVNLPALSPTMESGSI 318
IS+ R + L+ + + + ++ VQ + S+ P S + +PALSPTM G++
Sbjct: 44 ISSSNGVRSASIDLITRMDDSSPKPILRFGVQ-NFSSTGPISQTVLAMPALSPTMSHGNV 102
Query: 319 VSWEKKEGDKLSEGDLLCEIETDKATMGFETPEEGYLAKILIPAGTKGVPVGKLLCIIVG 498
V W KKEGDK+ GD+LCEIETDKAT+ FE+ EEG+LAKIL+ G+K +PV + + I+V
Sbjct: 103 VKWMKKEGDKVEVGDVLCEIETDKATVEFESQEEGFLAKILVTEGSKDIPVNEPIAIMVE 162
Query: 499 DQNDV 513
+++D+
Sbjct: 163 EEDDI 167
>At3g13930.1 68416.m01759 dihydrolipoamide S-acetyltransferase,
putative similar to dihydrolipoamide S-acetyltransferase
[Zea mays] GI:5669871; contains Pfam profiles PF00198:
2-oxo acid dehydrogenases acyltransferase (catalytic
domain), PF00364: Biotin-requiring enzyme, PF02817: e3
binding domain
Length = 539
Score = 117 bits (282), Expect = 5e-27
Identities = 52/108 (48%), Positives = 76/108 (70%), Gaps = 2/108 (1%)
Frame = +1
Query: 250 SSLPSHIKVNLPALSPTMESGSIVSWEKKEGDKLSEGDLLCEIETDKATMGFETPEEGYL 429
S LP H ++ +P+LSPTM G+I W KKEGDK++ G++LCE+ETDKAT+ E EEG+L
Sbjct: 106 SDLPPHQEIGMPSLSPTMTEGNIARWLKKEGDKVAPGEVLCEVETDKATVEMECMEEGFL 165
Query: 430 AKILIPAGTKGVPVGKLLCIIVGDQNDVAAFKDF--KDDSSPATPQKR 567
AKI+ G K + VG+++ I V D++D+ FKD+ D+ PA P+ +
Sbjct: 166 AKIVKEEGAKEIQVGEVIAITVEDEDDIQKFKDYTPSSDTGPAAPEAK 213
>At1g54220.1 68414.m06182 dihydrolipoamide S-acetyltransferase,
putative similar to dihydrolipoamide S-acetyltransferase
GI:5669871 [Zea mays]; contains Pfam profiles PF00198:
2-oxo acid dehydrogenases acyltransferase (catalytic
domain), PF00364: Biotin-requiring enzyme, PF02817: e3
binding domain
Length = 539
Score = 116 bits (278), Expect = 2e-26
Identities = 53/106 (50%), Positives = 74/106 (69%), Gaps = 1/106 (0%)
Frame = +1
Query: 250 SSLPSHIKVNLPALSPTMESGSIVSWEKKEGDKLSEGDLLCEIETDKATMGFETPEEGYL 429
S LP H ++ +P+LSPTM G+I W KKEGDK++ G++LCE+ETDKAT+ E EEGYL
Sbjct: 106 SDLPPHQEIGMPSLSPTMTEGNIARWLKKEGDKVAPGEVLCEVETDKATVEMECMEEGYL 165
Query: 430 AKILIPAGTKGVPVGKLLCIIVGDQNDVAAFKDFKDDS-SPATPQK 564
AKI+ G+K + VG+++ I V D+ D+ FKD+ S + A P K
Sbjct: 166 AKIVKAEGSKEIQVGEVIAITVEDEEDIGKFKDYTPSSTADAAPTK 211
>At1g34430.1 68414.m04277 dihydrolipoamide S-acetyltransferase,
putative similar to dihydrolipoamide S-acetyltransferase
(LTA2) [Arabidopsis thaliana] GI:5881963; contains Pfam
profiles PF00198: 2-oxo acid dehydrogenases
acyltransferase (catalytic domain), PF00364:
Biotin-requiring enzyme, PF02817: e3 binding domain
Length = 465
Score = 75.4 bits (177), Expect = 3e-14
Identities = 38/86 (44%), Positives = 57/86 (66%), Gaps = 1/86 (1%)
Frame = +1
Query: 271 KVNLPALSPTMESGSIVSWEKKEGDKLSEGDLLCEIETDKATMGFETPEEGYLAKILIPA 450
++ +PALS TM G IVSW K EGDKL++G+ + +E+DKA M ET +GYLA I++
Sbjct: 41 EIFMPALSSTMTEGKIVSWVKSEGDKLNKGESVVVVESDKADMDVETFYDGYLAAIMVEE 100
Query: 451 GTKGV-PVGKLLCIIVGDQNDVAAFK 525
G GV PVG + ++ ++++A K
Sbjct: 101 G--GVAPVGSAIALLAETEDEIADAK 124
>At3g25860.1 68416.m03222 dihydrolipoamide S-acetyltransferase
(LTA2) identical to dihydrolipoamide S-acetyltransferase
(LTA2) [Arabidopsis thaliana] GI:5881963
Length = 480
Score = 69.3 bits (162), Expect = 2e-12
Identities = 39/113 (34%), Positives = 66/113 (58%)
Frame = +1
Query: 271 KVNLPALSPTMESGSIVSWEKKEGDKLSEGDLLCEIETDKATMGFETPEEGYLAKILIPA 450
++ +PALS TM G IVSW K EG+KL++G+ + +E+DKA M ET +GYLA I++
Sbjct: 57 EIFMPALSSTMTEGKIVSWIKTEGEKLAKGESVVVVESDKADMDVETFYDGYLAAIVVGE 116
Query: 451 GTKGVPVGKLLCIIVGDQNDVAAFKDFKDDSSPATPQKRASQDKAACRTGPPL 609
G + PVG + ++ + ++ ++ S A + +S +A + PP+
Sbjct: 117 G-ETAPVGAAIGLLAETEAEI------EEAKSKAASKSSSSVAEAVVPSPPPV 162
>At5g55070.1 68418.m06864 2-oxoacid dehydrogenase family protein
similar to SP|Q01205 Dihydrolipoamide
succinyltransferase component of 2-oxoglutarate
dehydrogenase complex, mitochondrial precursor (EC
2.3.1.61) {Rattus norvegicus}; contains Pfam profiles
PF00198: 2-oxo acid dehydrogenases acyltransferase
(catalytic domain), PF00364: Biotin-requiring enzyme
Length = 464
Score = 45.2 bits (102), Expect = 3e-05
Identities = 28/115 (24%), Positives = 53/115 (46%)
Frame = +1
Query: 268 IKVNLPALSPTMESGSIVSWEKKEGDKLSEGDLLCEIETDKATMGFETPEEGYLAKILIP 447
++ +P + ++ G++ ++ KK GD++ + + +IETDK T+ +P G + + L+
Sbjct: 94 VEAVVPHMGESITDGTLAAFLKKPGDRVEADEAIAQIETDKVTIDIASPASGVIQEFLVK 153
Query: 448 AGTKGVPVGKLLCIIVGDQNDVAAFKDFKDDSSPATPQKRASQDKAACRTGPPLQ 612
G P N VA D S P ++A +K A + PP +
Sbjct: 154 EGDTVEP-----------GNKVARISTSADAVSHVAPSEKA-PEKPAPKPSPPAE 196
>At3g06850.2 68416.m00813 branched chain alpha-keto acid
dehydrogenase E2 subunit (din3) identical to branched
chain alpha-keto acid dehydrogenase E2 subunit (din3)
[Arabidopsis thaliana] GI:7021284
Length = 483
Score = 37.9 bits (84), Expect = 0.005
Identities = 23/66 (34%), Positives = 37/66 (56%), Gaps = 1/66 (1%)
Frame = +1
Query: 316 IVSWEKKEGDKLSEGDLLCEIETDKATMGFETPEEGYLAKILIPAGTKGVPVGK-LLCII 492
++ W KEGD + E LCE+++DKAT+ + +G +A I G + VG+ L+ +
Sbjct: 92 LLKWFVKEGDSVEEFQPLCEVQSDKATIEITSRFKGKVALISHSPGDI-IKVGETLVRLA 150
Query: 493 VGDQND 510
V D D
Sbjct: 151 VEDSQD 156
>At3g06850.1 68416.m00812 branched chain alpha-keto acid
dehydrogenase E2 subunit (din3) identical to branched
chain alpha-keto acid dehydrogenase E2 subunit (din3)
[Arabidopsis thaliana] GI:7021284
Length = 483
Score = 37.9 bits (84), Expect = 0.005
Identities = 23/66 (34%), Positives = 37/66 (56%), Gaps = 1/66 (1%)
Frame = +1
Query: 316 IVSWEKKEGDKLSEGDLLCEIETDKATMGFETPEEGYLAKILIPAGTKGVPVGK-LLCII 492
++ W KEGD + E LCE+++DKAT+ + +G +A I G + VG+ L+ +
Sbjct: 92 LLKWFVKEGDSVEEFQPLCEVQSDKATIEITSRFKGKVALISHSPGDI-IKVGETLVRLA 150
Query: 493 VGDQND 510
V D D
Sbjct: 151 VEDSQD 156
>At4g19515.1 68417.m02871 disease resistance family protein similar
to downy mildew resistance protein RPP5 [Arabidopsis
thaliana] GI:6449046; contains Pfam profile PF01582: TIR
domain
Length = 524
Score = 31.1 bits (67), Expect = 0.60
Identities = 13/36 (36%), Positives = 21/36 (58%)
Frame = +1
Query: 82 RNQILSDGLKKAIRSNITRCISTELAKRKVTNKLLE 189
R Q +SD LKK + I CI ++ R + NK+++
Sbjct: 270 RKQFISDFLKKLVYKGIRICIGDKILSRSLINKVIK 305
>At5g15530.1 68418.m01818 biotin carboxyl carrier protein 2 (BCCP2)
identical to biotin carboxyl carrier protein isoform 2
[Arabidopsis thaliana] gi|8886869|gb|AAF80592
Length = 255
Score = 29.9 bits (64), Expect = 1.4
Identities = 18/53 (33%), Positives = 27/53 (50%)
Frame = +1
Query: 334 KEGDKLSEGDLLCEIETDKATMGFETPEEGYLAKILIPAGTKGVPVGKLLCII 492
K GDK+ +G ++C IE K E + G + ++L G K V V L +I
Sbjct: 202 KVGDKVQKGQIVCIIEAMKLMNEIEAEKSGTIMELLAEDG-KPVSVDTPLFVI 253
>At3g15690.1 68416.m01988 biotin carboxyl carrier protein of
acetyl-CoA carboxylase-related contains weak similarity
to Biotin carboxyl carrier protein of acetyl-CoA
carboxylase, chloroplast precursor (BCCP)
(Swiss-Prot:Q42533) [Arabidopsis thaliana]
Length = 247
Score = 29.1 bits (62), Expect = 2.4
Identities = 16/42 (38%), Positives = 21/42 (50%)
Frame = +1
Query: 334 KEGDKLSEGDLLCEIETDKATMGFETPEEGYLAKILIPAGTK 459
KE D++ EG +LC IE E+ G + KIL G K
Sbjct: 201 KEKDQVKEGQILCYIEQLGGQFPIESDVTGEVVKILREDGGK 242
>At5g57550.1 68418.m07190 xyloglucan:xyloglucosyl transferase /
xyloglucan endotransglycosylase / endo-xyloglucan
transferase (XTR3) identical to endoxyloglucan
transferase GI:5533317 from [Arabidopsis thaliana]
Length = 284
Score = 28.7 bits (61), Expect = 3.2
Identities = 19/66 (28%), Positives = 33/66 (50%), Gaps = 6/66 (9%)
Frame = +1
Query: 283 PALSPTMESGSIVSWEKKEGDKLSEGDLLCEIETDKAT-MGFETPEEGYLAKI-----LI 444
P + T ++ ++W G L+ G+LL + D+A+ GF+T +E KI L+
Sbjct: 24 PVFAGTFDTEFDITWGDGRGKVLNNGELL-TLSLDRASGSGFQTKKEYLFGKIDMQLKLV 82
Query: 445 PAGTKG 462
P + G
Sbjct: 83 PGNSAG 88
>At5g23110.1 68418.m02703 zinc finger (C3HC4-type RING finger) family
protein contains Pfam profile: PF00097 zinc finger, C3HC4
type (RING finger)
Length = 4706
Score = 28.7 bits (61), Expect = 3.2
Identities = 14/31 (45%), Positives = 20/31 (64%)
Frame = +1
Query: 268 IKVNLPALSPTMESGSIVSWEKKEGDKLSEG 360
++V L L P + G IV+W+ K+GDKL G
Sbjct: 4475 VQVQLHPLRPFYK-GEIVAWKIKQGDKLRYG 4504
>At3g15690.2 68416.m01989 biotin carboxyl carrier protein of
acetyl-CoA carboxylase-related contains weak similarity
to Biotin carboxyl carrier protein of acetyl-CoA
carboxylase, chloroplast precursor (BCCP)
(Swiss-Prot:Q42533) [Arabidopsis thaliana]
Length = 263
Score = 28.7 bits (61), Expect = 3.2
Identities = 18/47 (38%), Positives = 23/47 (48%)
Frame = +1
Query: 334 KEGDKLSEGDLLCEIETDKATMGFETPEEGYLAKILIPAGTKGVPVG 474
KE D++ EG +LC IE E+ G + KIL G PVG
Sbjct: 201 KEKDQVKEGQILCYIEQLGGQFPIESDVTGEVVKIL---REDGEPVG 244
>At4g38590.1 68417.m05462 glycosyl hydrolase family 35 protein
similar to beta-galactosidase GI:7939621 from
[Lycopersicon esculentum]; contains Pfam profile PF01301
: Glycosyl hydrolases family 35
Length = 988
Score = 28.3 bits (60), Expect = 4.2
Identities = 10/32 (31%), Positives = 18/32 (56%)
Frame = +3
Query: 183 IRIYTEPGSSICTTMDCSDEVLFESTITYKGQ 278
+R Y +PG+ +C ++ +TI +KGQ
Sbjct: 307 VRYYEQPGTKVCAAFLSNNNTRDTNTIKFKGQ 338
>At1g66280.1 68414.m07527 glycosyl hydrolase family 1 protein
contains Pfam PF00232 : Glycosyl hydrolase family 1
domain; TIGRFAM TIGR01233: 6-phospho-beta-galactosidase;
similar to beta-glucosidase 1 (GI:12043529) [Arabidopsis
thaliana]
Length = 524
Score = 28.3 bits (60), Expect = 4.2
Identities = 19/71 (26%), Positives = 36/71 (50%), Gaps = 1/71 (1%)
Frame = +1
Query: 151 ELAKRKVTNKLLEYTQNQ-AVLSVPQWTVQMRYYSSLPSHIKVNLPALSPTMESGSIVSW 327
++ K + ++L ++T +Q A L V + YY+S S+ +P+ + S+V+W
Sbjct: 313 QIMKDLLGHRLPKFTSSQKAKLKDSTDFVGLNYYTSTFSNHNEKPDPSTPSWKQDSLVAW 372
Query: 328 EKKEGDKLSEG 360
E K D + G
Sbjct: 373 EPKNVDHSAIG 383
>At1g66270.2 68414.m07524 beta-glucosidase (PSR3.2) nearly identical
to GI:2286069 from (Arabidopsis thaliana) (Plant Mol.
Biol. 34 (1), 57-68 (1997)); similar to thioglucoside
glucohydrolase (GI:984052) [Arabidopsis thaliana]
Length = 522
Score = 28.3 bits (60), Expect = 4.2
Identities = 14/45 (31%), Positives = 22/45 (48%)
Frame = +1
Query: 232 VQMRYYSSLPSHIKVNLPALSPTMESGSIVSWEKKEGDKLSEGDL 366
V + YY+S S+ P+ + S+VSWE K D + G +
Sbjct: 339 VGLNYYTSTFSNYNEKPDPSKPSWKQDSLVSWEPKNVDHSAIGSM 383
>At1g66270.1 68414.m07523 beta-glucosidase (PSR3.2) nearly identical
to GI:2286069 from (Arabidopsis thaliana) (Plant Mol.
Biol. 34 (1), 57-68 (1997)); similar to thioglucoside
glucohydrolase (GI:984052) [Arabidopsis thaliana]
Length = 524
Score = 28.3 bits (60), Expect = 4.2
Identities = 14/45 (31%), Positives = 22/45 (48%)
Frame = +1
Query: 232 VQMRYYSSLPSHIKVNLPALSPTMESGSIVSWEKKEGDKLSEGDL 366
V + YY+S S+ P+ + S+VSWE K D + G +
Sbjct: 341 VGLNYYTSTFSNYNEKPDPSKPSWKQDSLVSWEPKNVDHSAIGSM 385
>At5g09790.1 68418.m01133 PHD finger family protein / SET
domain-containing protein contains Pfam domain, PF00628:
PHD-finger and PF00856: SET domain
Length = 352
Score = 27.9 bits (59), Expect = 5.6
Identities = 25/100 (25%), Positives = 44/100 (44%), Gaps = 4/100 (4%)
Frame = +1
Query: 280 LPALSPTMESGSIVSWEKKEGDKLSEGDLLCEI----ETDKATMGFETPEEGYLAKILIP 447
+ +++ M V +++E D+ S ++ CE E D + + + G+ K L P
Sbjct: 37 MKSMAEIMAKSVPVVEQEEEEDEDSYSNVTCEKCGSGEGDDELLLCDKCDRGFHMKCLRP 96
Query: 448 AGTKGVPVGKLLCIIVGDQNDVAAFKDFKDDSSPATPQKR 567
+ VP+G LC+ DQ V + S T +KR
Sbjct: 97 IVVR-VPIGTWLCVDCSDQRPVRKETRKRRRSCSLTVKKR 135
>At1g68270.1 68414.m07798 AMP-dependent synthetase and ligase family
protein similar to AMP-binding protein GI:1903034 from
[Brassica napus]; contains Pfam AMP-binding domain
PF00501
Length = 535
Score = 27.9 bits (59), Expect = 5.6
Identities = 11/46 (23%), Positives = 24/46 (52%)
Frame = -1
Query: 477 FPDRHSLCTGRNQYFGQVTFFRCLKAHSCFVSFNLAQKIAFTKFVP 340
+P+R S+ G+ ++ T+ RC + + +S N+A+ + P
Sbjct: 27 YPNRTSIIYGQTRFTWPQTYDRCCRLAASLISLNIAKNDVVSVVAP 72
>At5g16390.1 68418.m01915 biotin carboxyl carrier protein 1 (BCCP1)
identical to biotin carboxyl carrier protein of
acetyl-CoA carboxylase precursor [Arabidopsis thaliana]
gi|9759121|dbj|BAB09606
Length = 280
Score = 27.5 bits (58), Expect = 7.4
Identities = 13/40 (32%), Positives = 20/40 (50%)
Frame = +1
Query: 334 KEGDKLSEGDLLCEIETDKATMGFETPEEGYLAKILIPAG 453
K GDK+ +G +LC +E K E+ G + I+ G
Sbjct: 227 KVGDKVQKGQVLCIVEAMKLMNEIESDHTGTVVDIVAEDG 266
>At3g09260.1 68416.m01100 glycosyl hydrolase family 1 protein
contains Pfam PF00232 : Glycosyl hydrolase family 1
domain; TIGRFAM TIGR01233: 6-phospho-beta-galactosidase;
almost identical to beta-glucosidase GI:1732570 from
[Arabidopsis thaliana]; similar to beta-glucosidase 1
(GI:12043529) [Arabidopsis thaliana]
Length = 524
Score = 27.5 bits (58), Expect = 7.4
Identities = 20/72 (27%), Positives = 36/72 (50%), Gaps = 2/72 (2%)
Frame = +1
Query: 151 ELAKRKVTNKLLEYTQNQ-AVLSVPQWTVQMRYYSSLPS-HIKVNLPALSPTMESGSIVS 324
++ K V ++L ++T Q A L V + YY+S+ S H++ P+ P S+++
Sbjct: 313 QIMKDIVGHRLPKFTTEQKAKLKASTDFVGLNYYTSVFSNHLEKPDPS-KPRWMQDSLIT 371
Query: 325 WEKKEGDKLSEG 360
WE K + G
Sbjct: 372 WESKNAQNYAIG 383
>At2g31190.1 68415.m03809 expressed protein contains Pfam domain,
PF04884: Protein of unknown function, DUF647
Length = 433
Score = 27.5 bits (58), Expect = 7.4
Identities = 28/103 (27%), Positives = 42/103 (40%), Gaps = 4/103 (3%)
Frame = +1
Query: 190 YTQNQAVLSVPQWTVQMRYYSSLPSHIKVN----LPALSPTMESGSIVSWEKKEGDKLSE 357
Y+ N+ L Q+ + S+ S + L PT ++VSW K+G +
Sbjct: 78 YSVNEGYLRYTQFRALQHFSSAALSVLSTQSLLFAAGLRPTPAQATVVSWILKDGMQ-HV 136
Query: 358 GDLLCEIETDKATMGFETPEEGYLAKILIPAGTKGVPVGKLLC 486
G L+C A M E LA +L GT G+ + LC
Sbjct: 137 GKLIC--SNLGARMDSEPKRWRILADVLYDLGT-GLELVSPLC 176
>At1g65880.1 68414.m07476 AMP-dependent synthetase and ligase family
protein similar to AMP-binding protein GI:1903034 from
[Brassica napus]; contains Pfam AMP-binding domain
PF00501
Length = 580
Score = 27.5 bits (58), Expect = 7.4
Identities = 10/46 (21%), Positives = 24/46 (52%)
Frame = -1
Query: 477 FPDRHSLCTGRNQYFGQVTFFRCLKAHSCFVSFNLAQKIAFTKFVP 340
+P+R S+ G+ ++ T+ RC + + +S N+++ + P
Sbjct: 27 YPNRTSIIYGKTRFTWPQTYDRCCRLAASLISLNISKNDVVSVMAP 72
>At1g52670.1 68414.m05947 biotin/lipoyl attachment domain-containing
protein similar to SP|Q06881 Biotin carboxyl carrier
protein of acetyl-CoA carboxylase (BCCP) {Anabaena sp.};
contains Pfam profile PF00364: Biotin-requiring enzyme
Length = 274
Score = 27.5 bits (58), Expect = 7.4
Identities = 18/47 (38%), Positives = 23/47 (48%)
Frame = +1
Query: 334 KEGDKLSEGDLLCEIETDKATMGFETPEEGYLAKILIPAGTKGVPVG 474
KE D + EG +LC IE + E+ G + KIL G PVG
Sbjct: 212 KEKDIVKEGQVLCYIEQLGGQIPVESDVSGEIVKIL---REDGEPVG 255
>At5g16720.1 68418.m01958 expressed protein contains Pfam profile
PF04576: Protein of unknown function, DUF593
Length = 675
Score = 27.1 bits (57), Expect = 9.8
Identities = 14/34 (41%), Positives = 17/34 (50%)
Frame = +1
Query: 325 WEKKEGDKLSEGDLLCEIETDKATMGFETPEEGY 426
W K GD+ G +L I+ DK GFE E Y
Sbjct: 149 WGKTLGDREDGGLILEMIDDDKFGDGFEIDRESY 182
>At3g08730.1 68416.m01015 serine/threonine protein kinase (PK1)
(PK6) identical to serine/threonine-protein kinase
AtPK1/AtPK6 (ribosomal-protein S6 kinase ATPK6)
[Arabidopsis thaliana] SWISS-PROT:P42818
Length = 465
Score = 27.1 bits (57), Expect = 9.8
Identities = 11/17 (64%), Positives = 12/17 (70%)
Frame = +2
Query: 209 FYLYHNGLFR*GIIRVY 259
F LYH GLFR + RVY
Sbjct: 221 FQLYHQGLFREDLARVY 237
>At3g08720.2 68416.m01014 serine/threonine protein kinase (PK19)
identical to serine/threonine-protein kinase AtPK19
(Ribosomal-protein S6 kinase homolog) [Arabidopsis
thaliana] SWISS-PROT:Q39030
Length = 471
Score = 27.1 bits (57), Expect = 9.8
Identities = 11/17 (64%), Positives = 12/17 (70%)
Frame = +2
Query: 209 FYLYHNGLFR*GIIRVY 259
F LYH GLFR + RVY
Sbjct: 227 FQLYHQGLFREDLARVY 243
>At3g08720.1 68416.m01013 serine/threonine protein kinase (PK19)
identical to serine/threonine-protein kinase AtPK19
(Ribosomal-protein S6 kinase homolog) [Arabidopsis
thaliana] SWISS-PROT:Q39030
Length = 471
Score = 27.1 bits (57), Expect = 9.8
Identities = 11/17 (64%), Positives = 12/17 (70%)
Frame = +2
Query: 209 FYLYHNGLFR*GIIRVY 259
F LYH GLFR + RVY
Sbjct: 227 FQLYHQGLFREDLARVY 243
>At2g47750.1 68415.m05961 auxin-responsive GH3 family protein
similar to auxin-responsive GH3 product [Glycine max]
GI:18591; contains Pfam profile PF03321: GH3
auxin-responsive promoter
Length = 585
Score = 27.1 bits (57), Expect = 9.8
Identities = 21/54 (38%), Positives = 28/54 (51%), Gaps = 2/54 (3%)
Frame = +1
Query: 67 RTIVLRNQILSDGLKKAIRSNITRCISTELAKRKVTNK--LLEYTQNQAVLSVP 222
R I RN +LS L K ++ R I+ LAK+K+ + L EYT SVP
Sbjct: 427 RFICRRNVVLSIDLDKTNEEDLHRSIT--LAKKKLGSNAFLAEYTSYADTSSVP 478
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,959,566
Number of Sequences: 28952
Number of extensions: 293992
Number of successful extensions: 877
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 853
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 876
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1226538000
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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