Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV30118
(666 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z79755-6|CAB02104.1| 192|Caenorhabditis elegans Hypothetical pr... 194 4e-50
AF169201-2|AAF01679.1| 192|Caenorhabditis elegans CPN-1 protein. 194 4e-50
U97013-5|AAB52338.1| 142|Caenorhabditis elegans Calponin protei... 135 2e-32
AF039711-7|AAB96713.3| 154|Caenorhabditis elegans Calponin prot... 123 1e-28
AF040641-1|AAB94947.2| 203|Caenorhabditis elegans Calponin prot... 112 2e-25
U23520-5|AAC46554.4| 975|Caenorhabditis elegans Mammalian vav (... 43 2e-04
U23520-4|ABB88236.1| 1007|Caenorhabditis elegans Mammalian vav (... 43 2e-04
DQ136172-1|AAZ66767.1| 1007|Caenorhabditis elegans VAV-1 protein. 43 2e-04
U39645-2|AAA80365.2| 638|Caenorhabditis elegans Hypothetical pr... 42 5e-04
AF039710-6|AAB96688.1| 392|Caenorhabditis elegans Hypothetical ... 33 0.24
Z81570-7|CAB04608.2| 4063|Caenorhabditis elegans Hypothetical pr... 32 0.32
Z75956-5|CAB00130.2| 4063|Caenorhabditis elegans Hypothetical pr... 32 0.32
AF053496-1|AAC08577.1| 4063|Caenorhabditis elegans beta chain sp... 32 0.32
AY157938-1|AAN35200.1| 1751|Caenorhabditis elegans ANC-1 protein. 32 0.42
AC006834-1|AAF40010.3| 8545|Caenorhabditis elegans Abnormal nucl... 32 0.42
U04712-3|AAA81903.1| 357|Caenorhabditis elegans unc-87 protein. 30 1.7
U04712-2|AAA81902.1| 565|Caenorhabditis elegans unc-87 protein. 30 1.7
U04712-1|AAA81901.1| 374|Caenorhabditis elegans unc-87 protein. 30 1.7
U04711-2|AAA81900.1| 357|Caenorhabditis elegans unc-87 protein. 30 1.7
U04711-1|AAA81899.1| 374|Caenorhabditis elegans unc-87 protein. 30 1.7
AF106590-6|AAT68897.1| 544|Caenorhabditis elegans Uncoordinated... 30 1.7
AF106590-5|AAC78234.1| 565|Caenorhabditis elegans Uncoordinated... 30 1.7
AF106590-4|AAK68303.1| 374|Caenorhabditis elegans Uncoordinated... 30 1.7
U88170-3|AAB42247.1| 338|Caenorhabditis elegans Hypothetical pr... 29 3.9
Z78537-4|CAB01721.1| 569|Caenorhabditis elegans Hypothetical pr... 28 5.2
Z68014-14|CAA92030.1| 569|Caenorhabditis elegans Hypothetical p... 28 5.2
U42439-2|AAA83506.1| 162|Caenorhabditis elegans Hypothetical pr... 28 6.8
Z81097-1|CAB03175.1| 491|Caenorhabditis elegans Hypothetical pr... 27 9.1
U96695-1|AAB57697.1| 491|Caenorhabditis elegans deoxyuridinetri... 27 9.1
U64854-2|AAK77611.1| 2257|Caenorhabditis elegans Uncoordinated p... 27 9.1
U64854-1|AAK77612.2| 2302|Caenorhabditis elegans Uncoordinated p... 27 9.1
AF261891-1|AAF72996.1| 2257|Caenorhabditis elegans beta-spectrin... 27 9.1
AF166170-1|AAD49859.1| 2257|Caenorhabditis elegans beta-G spectr... 27 9.1
AF166169-1|AAD49858.1| 2302|Caenorhabditis elegans beta-G spectr... 27 9.1
AF002197-3|AAD34660.1| 1451|Caenorhabditis elegans Notch signali... 27 9.1
>Z79755-6|CAB02104.1| 192|Caenorhabditis elegans Hypothetical
protein F43G9.9 protein.
Length = 192
Score = 194 bits (474), Expect = 4e-50
Identities = 96/185 (51%), Positives = 134/185 (72%), Gaps = 2/185 (1%)
Frame = +2
Query: 38 RAGKAGINAEAQARIHSKYNDEIAQETLEWIRKLTGEPANTSGDADNLYEVLKDGTLLCK 217
RA K+GI EAQ +I+ KY+ +A E L+W++ +TG+ +T GDADNL +V +DG+LLC
Sbjct: 9 RAEKSGIALEAQQKIYEKYDKNLAGEILQWVQNVTGQSFDTQGDADNLVKVFQDGSLLCT 68
Query: 218 LVNELQPGSVKKINQTTMAFKCMENINAFLEAVKKLGVPAQETFQTIDLWERQNLYSVVV 397
L N L+PGSVKK+N + MAFK MENI+ FL+ ++ V E FQT+DL+E Q+ +V++
Sbjct: 69 LANSLKPGSVKKVNTSAMAFKKMENISFFLKFAEEY-VQKSELFQTVDLYEGQDPNAVLI 127
Query: 398 CLQSLGRKA-GNFGKPSIGPKEADKNVRDFSEEQLKAGQNVISLQYGTNKG-QQSGISFG 571
CL SL RK+ NFG+ +GPKEA + R++++EQLKAG NVI LQ G+NKG SG++ G
Sbjct: 128 CLASLARKSEKNFGRSGLGPKEAQGDRREWTDEQLKAGHNVIGLQMGSNKGATASGLNMG 187
Query: 572 NRRQM 586
N R M
Sbjct: 188 NTRHM 192
>AF169201-2|AAF01679.1| 192|Caenorhabditis elegans CPN-1 protein.
Length = 192
Score = 194 bits (474), Expect = 4e-50
Identities = 96/185 (51%), Positives = 134/185 (72%), Gaps = 2/185 (1%)
Frame = +2
Query: 38 RAGKAGINAEAQARIHSKYNDEIAQETLEWIRKLTGEPANTSGDADNLYEVLKDGTLLCK 217
RA K+GI EAQ +I+ KY+ +A E L+W++ +TG+ +T GDADNL +V +DG+LLC
Sbjct: 9 RAEKSGIALEAQQKIYEKYDKNLAGEILQWVQNVTGQSFDTQGDADNLVKVFQDGSLLCT 68
Query: 218 LVNELQPGSVKKINQTTMAFKCMENINAFLEAVKKLGVPAQETFQTIDLWERQNLYSVVV 397
L N L+PGSVKK+N + MAFK MENI+ FL+ ++ V E FQT+DL+E Q+ +V++
Sbjct: 69 LANSLKPGSVKKVNTSAMAFKKMENISFFLKFAEEY-VQKSELFQTVDLYEGQDPNAVLI 127
Query: 398 CLQSLGRKA-GNFGKPSIGPKEADKNVRDFSEEQLKAGQNVISLQYGTNKG-QQSGISFG 571
CL SL RK+ NFG+ +GPKEA + R++++EQLKAG NVI LQ G+NKG SG++ G
Sbjct: 128 CLASLARKSEKNFGRSGLGPKEAQGDRREWTDEQLKAGHNVIGLQMGSNKGATASGLNMG 187
Query: 572 NRRQM 586
N R M
Sbjct: 188 NTRHM 192
>U97013-5|AAB52338.1| 142|Caenorhabditis elegans Calponin protein 3
protein.
Length = 142
Score = 135 bits (327), Expect = 2e-32
Identities = 66/134 (49%), Positives = 89/134 (66%)
Frame = +2
Query: 38 RAGKAGINAEAQARIHSKYNDEIAQETLEWIRKLTGEPANTSGDADNLYEVLKDGTLLCK 217
R GI + + SK+ D+ A LEWI+KL+GE +TSG+ DN + +LKDGTLLCK
Sbjct: 4 RTTAGGIGFAVRQKQDSKFIDKEATLLLEWIKKLSGENISTSGERDNFHNLLKDGTLLCK 63
Query: 218 LVNELQPGSVKKINQTTMAFKCMENINAFLEAVKKLGVPAQETFQTIDLWERQNLYSVVV 397
N ++ GS+KK+ + F CMENINAF+E KK GVP +ETFQ+++L E ++L+SV V
Sbjct: 64 AANGIEAGSIKKVQKPISTFACMENINAFVEFAKKQGVPNEETFQSVELVEGRDLFSVCV 123
Query: 398 CLQSLGRKAGNFGK 439
L SLGR GK
Sbjct: 124 TLLSLGRVLQKAGK 137
>AF039711-7|AAB96713.3| 154|Caenorhabditis elegans Calponin protein
4 protein.
Length = 154
Score = 123 bits (297), Expect = 1e-28
Identities = 69/144 (47%), Positives = 87/144 (60%)
Frame = +2
Query: 41 AGKAGINAEAQARIHSKYNDEIAQETLEWIRKLTGEPANTSGDADNLYEVLKDGTLLCKL 220
AG AG + QA SK+ND A LEWIR LT E + DN E LKDG LCKL
Sbjct: 11 AGMAGAILDKQA---SKFNDVEAGYLLEWIRDLTKEDFDCEASRDNFREQLKDGQRLCKL 67
Query: 221 VNELQPGSVKKINQTTMAFKCMENINAFLEAVKKLGVPAQETFQTIDLWERQNLYSVVVC 400
VN ++ GSVKKI + F C+ENIN F A + LGV +ETFQ++DL++ ++L+SV V
Sbjct: 68 VNAIKAGSVKKIMKPISNFNCLENINQFSTAARSLGVKDEETFQSVDLFDGRDLFSVTVT 127
Query: 401 LQSLGRKAGNFGKPSIGPKEADKN 472
LQSL RK G PK+ K+
Sbjct: 128 LQSLARKVEKLG--ITPPKQVSKD 149
>AF040641-1|AAB94947.2| 203|Caenorhabditis elegans Calponin protein
2 protein.
Length = 203
Score = 112 bits (269), Expect = 2e-25
Identities = 70/189 (37%), Positives = 104/189 (55%), Gaps = 11/189 (5%)
Frame = +2
Query: 53 GINAEAQARIHSKYNDEIAQETLEWIRKLTGE----PANTSGDADNLYEVLKDGTLLCKL 220
G++ E Q + +++ E A E L+WI +TGE T + ++ +LKDG +LCKL
Sbjct: 9 GLSRELQKKNDARFVLEEAIEVLKWIENVTGERFSFDVTTCESSTDVSNLLKDGVMLCKL 68
Query: 221 VNELQPGSVKKINQTT-MAFKCMENINAFLEAVKKLGVPAQETFQTIDLWERQNLYSVVV 397
+ +L P N+ MAF MENI+ FL A K+ GV FQT+DL+E + Y V+
Sbjct: 69 IEKLDPSCRVVYNKKPKMAFPMMENISNFLAAAKQFGVMEISCFQTVDLYENKQCYKVIE 128
Query: 398 CLQSLG----RKAGNFGKPSIGPKEADKNVRDFSEEQLKAGQNVISLQYGTNK-GQQSGI 562
CL+ L ++ + P+ K A + R F E ++ G+ VI LQYGTNK Q G+
Sbjct: 129 CLRLLAAVAQSRSSHLEHPAWVVKLAQSSPRQFPEAVMRRGEMVIPLQYGTNKCASQKGM 188
Query: 563 S-FGNRRQM 586
S +G RQ+
Sbjct: 189 SPYGLPRQI 197
>U23520-5|AAC46554.4| 975|Caenorhabditis elegans Mammalian vav
(oncogene) relatedprotein 1, isoform a protein.
Length = 975
Score = 43.2 bits (97), Expect = 2e-04
Identities = 31/101 (30%), Positives = 43/101 (42%), Gaps = 5/101 (4%)
Frame = +2
Query: 125 WIRKLTGEPANTSGDADNLYEVLKDGTLLCKLVNELQPGSV--KKINQTTM--AFKCMEN 292
W+R + + +G VL+DG LLC+L N L P + KKI +T F C N
Sbjct: 14 WLRDMKVLTTDKNGTMLEFASVLRDGILLCRLANTLVPNGIDQKKIMRTNQPSPFLCCNN 73
Query: 293 INAFLEAVKK-LGVPAQETFQTIDLWERQNLYSVVVCLQSL 412
IN F K + + F DL+ V+ L L
Sbjct: 74 INYFAMFCKTYFNLEDADLFTAEDLYYMNGFQKVLKTLSFL 114
>U23520-4|ABB88236.1| 1007|Caenorhabditis elegans Mammalian vav
(oncogene) relatedprotein 1, isoform b protein.
Length = 1007
Score = 43.2 bits (97), Expect = 2e-04
Identities = 31/101 (30%), Positives = 43/101 (42%), Gaps = 5/101 (4%)
Frame = +2
Query: 125 WIRKLTGEPANTSGDADNLYEVLKDGTLLCKLVNELQPGSV--KKINQTTM--AFKCMEN 292
W+R + + +G VL+DG LLC+L N L P + KKI +T F C N
Sbjct: 46 WLRDMKVLTTDKNGTMLEFASVLRDGILLCRLANTLVPNGIDQKKIMRTNQPSPFLCCNN 105
Query: 293 INAFLEAVKK-LGVPAQETFQTIDLWERQNLYSVVVCLQSL 412
IN F K + + F DL+ V+ L L
Sbjct: 106 INYFAMFCKTYFNLEDADLFTAEDLYYMNGFQKVLKTLSFL 146
>DQ136172-1|AAZ66767.1| 1007|Caenorhabditis elegans VAV-1 protein.
Length = 1007
Score = 43.2 bits (97), Expect = 2e-04
Identities = 31/101 (30%), Positives = 43/101 (42%), Gaps = 5/101 (4%)
Frame = +2
Query: 125 WIRKLTGEPANTSGDADNLYEVLKDGTLLCKLVNELQPGSV--KKINQTTM--AFKCMEN 292
W+R + + +G VL+DG LLC+L N L P + KKI +T F C N
Sbjct: 46 WLRDMKVLTTDKNGTMLEFASVLRDGILLCRLANTLVPNGIDQKKIMRTNQPSPFLCCNN 105
Query: 293 INAFLEAVKK-LGVPAQETFQTIDLWERQNLYSVVVCLQSL 412
IN F K + + F DL+ V+ L L
Sbjct: 106 INYFAMFCKTYFNLEDADLFTAEDLYYMNGFQKVLKTLSFL 146
>U39645-2|AAA80365.2| 638|Caenorhabditis elegans Hypothetical
protein C14F11.2 protein.
Length = 638
Score = 41.5 bits (93), Expect = 5e-04
Identities = 20/66 (30%), Positives = 35/66 (53%), Gaps = 3/66 (4%)
Frame = +2
Query: 191 LKDGTLLCKLVNELQPGSVKKINQTTMAF---KCMENINAFLEAVKKLGVPAQETFQTID 361
L DG LCK +N+L P S+ + T + + N++ FL+ +K+GVP +D
Sbjct: 548 LSDGQELCKFINKLHPESISLASSTDSSIATTRSKMNVDRFLQYCRKIGVPETTLCSQMD 607
Query: 362 LWERQN 379
+ ++N
Sbjct: 608 IISKRN 613
>AF039710-6|AAB96688.1| 392|Caenorhabditis elegans Hypothetical
protein C46E10.3 protein.
Length = 392
Score = 32.7 bits (71), Expect = 0.24
Identities = 16/41 (39%), Positives = 23/41 (56%)
Frame = -1
Query: 534 PYCSDITF*PAFSCSSEKSRTFLSASLGPMDGLPKLPAFLP 412
P CS I F P+ + SS S + + L +D L K+P+F P
Sbjct: 229 PQCSVINFVPSLAISSLPSTSIPATILPKIDNLAKVPSFAP 269
>Z81570-7|CAB04608.2| 4063|Caenorhabditis elegans Hypothetical
protein R31.1 protein.
Length = 4063
Score = 32.3 bits (70), Expect = 0.32
Identities = 16/49 (32%), Positives = 29/49 (59%)
Frame = +2
Query: 176 NLYEVLKDGTLLCKLVNELQPGSVKKINQTTMAFKCMENINAFLEAVKK 322
+L+E + DG +L KL+ + + K N+ M + +EN+N L+ +KK
Sbjct: 74 DLFEDVGDGIMLMKLLEIISGDKLGKPNRGRMRVQKVENLNKVLDFLKK 122
>Z75956-5|CAB00130.2| 4063|Caenorhabditis elegans Hypothetical
protein R31.1 protein.
Length = 4063
Score = 32.3 bits (70), Expect = 0.32
Identities = 16/49 (32%), Positives = 29/49 (59%)
Frame = +2
Query: 176 NLYEVLKDGTLLCKLVNELQPGSVKKINQTTMAFKCMENINAFLEAVKK 322
+L+E + DG +L KL+ + + K N+ M + +EN+N L+ +KK
Sbjct: 74 DLFEDVGDGIMLMKLLEIISGDKLGKPNRGRMRVQKVENLNKVLDFLKK 122
>AF053496-1|AAC08577.1| 4063|Caenorhabditis elegans beta chain
spectrin homolog Sma1 protein.
Length = 4063
Score = 32.3 bits (70), Expect = 0.32
Identities = 16/49 (32%), Positives = 29/49 (59%)
Frame = +2
Query: 176 NLYEVLKDGTLLCKLVNELQPGSVKKINQTTMAFKCMENINAFLEAVKK 322
+L+E + DG +L KL+ + + K N+ M + +EN+N L+ +KK
Sbjct: 74 DLFEDVGDGIMLMKLLEIISGDKLGKPNRGRMRVQKVENLNKVLDFLKK 122
>AY157938-1|AAN35200.1| 1751|Caenorhabditis elegans ANC-1 protein.
Length = 1751
Score = 31.9 bits (69), Expect = 0.42
Identities = 22/84 (26%), Positives = 45/84 (53%), Gaps = 4/84 (4%)
Frame = +2
Query: 92 YNDEIAQETL--EWIRKLTGEPANTSGDADNLYEVLKDGTLLCKLVNELQPGSVKKINQT 265
+ DE AQ+ WI E ++SG ++L+E ++DG LLC L+ E+ G +++
Sbjct: 19 HEDEKAQKNTFTRWIN-FHLEEHSSSGRIEDLFEDIRDGVLLCHLI-EVLTGEALAVHKG 76
Query: 266 TMAFKC--MENINAFLEAVKKLGV 331
++ + + N+ L +++ G+
Sbjct: 77 RVSKRVHHIANLTTALTVLRRRGL 100
>AC006834-1|AAF40010.3| 8545|Caenorhabditis elegans Abnormal nuclear
anchorage protein1 protein.
Length = 8545
Score = 31.9 bits (69), Expect = 0.42
Identities = 22/84 (26%), Positives = 45/84 (53%), Gaps = 4/84 (4%)
Frame = +2
Query: 92 YNDEIAQETL--EWIRKLTGEPANTSGDADNLYEVLKDGTLLCKLVNELQPGSVKKINQT 265
+ DE AQ+ WI E ++SG ++L+E ++DG LLC L+ E+ G +++
Sbjct: 19 HEDEKAQKNTFTRWIN-FHLEEHSSSGRIEDLFEDIRDGVLLCHLI-EVLTGEALAVHKG 76
Query: 266 TMAFKC--MENINAFLEAVKKLGV 331
++ + + N+ L +++ G+
Sbjct: 77 RVSKRVHHIANLTTALTVLRRRGL 100
>U04712-3|AAA81903.1| 357|Caenorhabditis elegans unc-87 protein.
Length = 357
Score = 29.9 bits (64), Expect = 1.7
Identities = 28/116 (24%), Positives = 45/116 (38%), Gaps = 5/116 (4%)
Frame = +2
Query: 254 INQTTMAFKCMENINAFLEAVKKLGVPAQETFQTIDLWERQNLYSVVVCLQSLGR---KA 424
I+QTT+ + N A + + G P E W+ + +V R +A
Sbjct: 218 IDQTTIPSQMGSNQYASQKGMTGFGQPRWEVLDPSISWQNRKSQGMVRLQSGTNRFASQA 277
Query: 425 GNFGKPSIGPKEADKNVRDFSEEQLKAGQNVISLQYGTNKG--QQSGISFGNRRQM 586
G G + + + E +K + +I Q G NKG Q+ SFG R +
Sbjct: 278 GMIGFGTCRNTTFEAEGGELPYEAMKVSETIIPSQAGWNKGDSQKKMTSFGAPRDV 333
>U04712-2|AAA81902.1| 565|Caenorhabditis elegans unc-87 protein.
Length = 565
Score = 29.9 bits (64), Expect = 1.7
Identities = 28/116 (24%), Positives = 45/116 (38%), Gaps = 5/116 (4%)
Frame = +2
Query: 254 INQTTMAFKCMENINAFLEAVKKLGVPAQETFQTIDLWERQNLYSVVVCLQSLGR---KA 424
I+QTT+ + N A + + G P E W+ + +V R +A
Sbjct: 426 IDQTTIPSQMGSNQYASQKGMTGFGQPRWEVLDPSISWQNRKSQGMVRLQSGTNRFASQA 485
Query: 425 GNFGKPSIGPKEADKNVRDFSEEQLKAGQNVISLQYGTNKG--QQSGISFGNRRQM 586
G G + + + E +K + +I Q G NKG Q+ SFG R +
Sbjct: 486 GMIGFGTCRNTTFEAEGGELPYEAMKVSETIIPSQAGWNKGDSQKKMTSFGAPRDV 541
>U04712-1|AAA81901.1| 374|Caenorhabditis elegans unc-87 protein.
Length = 374
Score = 29.9 bits (64), Expect = 1.7
Identities = 28/116 (24%), Positives = 45/116 (38%), Gaps = 5/116 (4%)
Frame = +2
Query: 254 INQTTMAFKCMENINAFLEAVKKLGVPAQETFQTIDLWERQNLYSVVVCLQSLGR---KA 424
I+QTT+ + N A + + G P E W+ + +V R +A
Sbjct: 235 IDQTTIPSQMGSNQYASQKGMTGFGQPRWEVLDPSISWQNRKSQGMVRLQSGTNRFASQA 294
Query: 425 GNFGKPSIGPKEADKNVRDFSEEQLKAGQNVISLQYGTNKG--QQSGISFGNRRQM 586
G G + + + E +K + +I Q G NKG Q+ SFG R +
Sbjct: 295 GMIGFGTCRNTTFEAEGGELPYEAMKVSETIIPSQAGWNKGDSQKKMTSFGAPRDV 350
>U04711-2|AAA81900.1| 357|Caenorhabditis elegans unc-87 protein.
Length = 357
Score = 29.9 bits (64), Expect = 1.7
Identities = 28/116 (24%), Positives = 45/116 (38%), Gaps = 5/116 (4%)
Frame = +2
Query: 254 INQTTMAFKCMENINAFLEAVKKLGVPAQETFQTIDLWERQNLYSVVVCLQSLGR---KA 424
I+QTT+ + N A + + G P E W+ + +V R +A
Sbjct: 218 IDQTTIPSQMGSNQYASQKGMTGFGQPRWEVLDPSISWQNRKSQGMVRLQSGTNRFASQA 277
Query: 425 GNFGKPSIGPKEADKNVRDFSEEQLKAGQNVISLQYGTNKG--QQSGISFGNRRQM 586
G G + + + E +K + +I Q G NKG Q+ SFG R +
Sbjct: 278 GMIGFGTCRNTTFEAEGGELPYEAMKVSETIIPSQAGWNKGDSQKKMTSFGAPRDV 333
>U04711-1|AAA81899.1| 374|Caenorhabditis elegans unc-87 protein.
Length = 374
Score = 29.9 bits (64), Expect = 1.7
Identities = 28/116 (24%), Positives = 45/116 (38%), Gaps = 5/116 (4%)
Frame = +2
Query: 254 INQTTMAFKCMENINAFLEAVKKLGVPAQETFQTIDLWERQNLYSVVVCLQSLGR---KA 424
I+QTT+ + N A + + G P E W+ + +V R +A
Sbjct: 235 IDQTTIPSQMGSNQYASQKGMTGFGQPRWEVLDPSISWQNRKSQGMVRLQSGTNRFASQA 294
Query: 425 GNFGKPSIGPKEADKNVRDFSEEQLKAGQNVISLQYGTNKG--QQSGISFGNRRQM 586
G G + + + E +K + +I Q G NKG Q+ SFG R +
Sbjct: 295 GMIGFGTCRNTTFEAEGGELPYEAMKVSETIIPSQAGWNKGDSQKKMTSFGAPRDV 350
>AF106590-6|AAT68897.1| 544|Caenorhabditis elegans Uncoordinated
protein 87, isoform c protein.
Length = 544
Score = 29.9 bits (64), Expect = 1.7
Identities = 28/116 (24%), Positives = 45/116 (38%), Gaps = 5/116 (4%)
Frame = +2
Query: 254 INQTTMAFKCMENINAFLEAVKKLGVPAQETFQTIDLWERQNLYSVVVCLQSLGR---KA 424
I+QTT+ + N A + + G P E W+ + +V R +A
Sbjct: 405 IDQTTIPSQMGSNQYASQKGMTGFGQPRWEVLDPSISWQNRKSQGMVRLQSGTNRFASQA 464
Query: 425 GNFGKPSIGPKEADKNVRDFSEEQLKAGQNVISLQYGTNKG--QQSGISFGNRRQM 586
G G + + + E +K + +I Q G NKG Q+ SFG R +
Sbjct: 465 GMIGFGTCRNTTFEAEGGELPYEAMKVSETIIPSQAGWNKGDSQKKMTSFGAPRDV 520
>AF106590-5|AAC78234.1| 565|Caenorhabditis elegans Uncoordinated
protein 87, isoform a protein.
Length = 565
Score = 29.9 bits (64), Expect = 1.7
Identities = 28/116 (24%), Positives = 45/116 (38%), Gaps = 5/116 (4%)
Frame = +2
Query: 254 INQTTMAFKCMENINAFLEAVKKLGVPAQETFQTIDLWERQNLYSVVVCLQSLGR---KA 424
I+QTT+ + N A + + G P E W+ + +V R +A
Sbjct: 426 IDQTTIPSQMGSNQYASQKGMTGFGQPRWEVLDPSISWQNRKSQGMVRLQSGTNRFASQA 485
Query: 425 GNFGKPSIGPKEADKNVRDFSEEQLKAGQNVISLQYGTNKG--QQSGISFGNRRQM 586
G G + + + E +K + +I Q G NKG Q+ SFG R +
Sbjct: 486 GMIGFGTCRNTTFEAEGGELPYEAMKVSETIIPSQAGWNKGDSQKKMTSFGAPRDV 541
>AF106590-4|AAK68303.1| 374|Caenorhabditis elegans Uncoordinated
protein 87, isoform b protein.
Length = 374
Score = 29.9 bits (64), Expect = 1.7
Identities = 28/116 (24%), Positives = 45/116 (38%), Gaps = 5/116 (4%)
Frame = +2
Query: 254 INQTTMAFKCMENINAFLEAVKKLGVPAQETFQTIDLWERQNLYSVVVCLQSLGR---KA 424
I+QTT+ + N A + + G P E W+ + +V R +A
Sbjct: 235 IDQTTIPSQMGSNQYASQKGMTGFGQPRWEVLDPSISWQNRKSQGMVRLQSGTNRFASQA 294
Query: 425 GNFGKPSIGPKEADKNVRDFSEEQLKAGQNVISLQYGTNKG--QQSGISFGNRRQM 586
G G + + + E +K + +I Q G NKG Q+ SFG R +
Sbjct: 295 GMIGFGTCRNTTFEAEGGELPYEAMKVSETIIPSQAGWNKGDSQKKMTSFGAPRDV 350
>U88170-3|AAB42247.1| 338|Caenorhabditis elegans Hypothetical
protein C10G11.7 protein.
Length = 338
Score = 28.7 bits (61), Expect = 3.9
Identities = 23/55 (41%), Positives = 31/55 (56%), Gaps = 7/55 (12%)
Frame = +2
Query: 194 KDGTLLCKLVNELQPGSVK----KINQTTMAFKCME--NINAF-LEAVKKLGVPA 337
KDG +L KL N L+PG+V+ + N A K ++ NI+AF A K LG A
Sbjct: 162 KDGDVLAKLANALEPGAVEVAAAEENADAAAQKEVQKKNIDAFGAWAQKTLGTEA 216
>Z78537-4|CAB01721.1| 569|Caenorhabditis elegans Hypothetical
protein W04G3.8 protein.
Length = 569
Score = 28.3 bits (60), Expect = 5.2
Identities = 32/115 (27%), Positives = 48/115 (41%), Gaps = 5/115 (4%)
Frame = +2
Query: 32 EYRAGKA--GINAEAQARIHSKYNDEIAQETLEWIRKLTGEPANTSGDADNLYEVLKDGT 205
+Y G A G N +A ++HS + AQ WI KL E N+ GD+ Y ++ +
Sbjct: 451 KYSLGYAFRGGNKDAMLQLHSSETSD-AQPF--WIYKLGPEGKNSFGDSQYEYAIISNWV 507
Query: 206 LLCKLVNELQPGSVKKINQTTMAFKCMEN---INAFLEAVKKLGVPAQETFQTID 361
V P + K Q + + +E+ IN F+ A L T Q D
Sbjct: 508 KYPVTVLVRDPDTFKTKYQKEV-LRWLEDQGFINGFIRAFNLLQPAGYSTCQYAD 561
>Z68014-14|CAA92030.1| 569|Caenorhabditis elegans Hypothetical
protein W04G3.8 protein.
Length = 569
Score = 28.3 bits (60), Expect = 5.2
Identities = 32/115 (27%), Positives = 48/115 (41%), Gaps = 5/115 (4%)
Frame = +2
Query: 32 EYRAGKA--GINAEAQARIHSKYNDEIAQETLEWIRKLTGEPANTSGDADNLYEVLKDGT 205
+Y G A G N +A ++HS + AQ WI KL E N+ GD+ Y ++ +
Sbjct: 451 KYSLGYAFRGGNKDAMLQLHSSETSD-AQPF--WIYKLGPEGKNSFGDSQYEYAIISNWV 507
Query: 206 LLCKLVNELQPGSVKKINQTTMAFKCMEN---INAFLEAVKKLGVPAQETFQTID 361
V P + K Q + + +E+ IN F+ A L T Q D
Sbjct: 508 KYPVTVLVRDPDTFKTKYQKEV-LRWLEDQGFINGFIRAFNLLQPAGYSTCQYAD 561
>U42439-2|AAA83506.1| 162|Caenorhabditis elegans Hypothetical
protein F19C7.5 protein.
Length = 162
Score = 27.9 bits (59), Expect = 6.8
Identities = 12/36 (33%), Positives = 18/36 (50%)
Frame = -2
Query: 665 FFFFFLKSTKKNIFNSFYFINRVIKITFDACCRRIC 558
F FL S F + Y I+ V+ + + CC R+C
Sbjct: 59 FLLHFLPSYYSKWFPANYVISPVVSFSSNICCIRLC 94
>Z81097-1|CAB03175.1| 491|Caenorhabditis elegans Hypothetical
protein K07A1.2 protein.
Length = 491
Score = 27.5 bits (58), Expect = 9.1
Identities = 13/50 (26%), Positives = 23/50 (46%)
Frame = +2
Query: 380 LYSVVVCLQSLGRKAGNFGKPSIGPKEADKNVRDFSEEQLKAGQNVISLQ 529
+Y L++ R AG FG EA+ ++ EQ+K +++Q
Sbjct: 302 VYEAASELENTDRGAGGFGSTGQNTMEAEPALKKSKTEQIKTSATSVTIQ 351
>U96695-1|AAB57697.1| 491|Caenorhabditis elegans
deoxyuridinetriphosphatase protein.
Length = 491
Score = 27.5 bits (58), Expect = 9.1
Identities = 13/50 (26%), Positives = 23/50 (46%)
Frame = +2
Query: 380 LYSVVVCLQSLGRKAGNFGKPSIGPKEADKNVRDFSEEQLKAGQNVISLQ 529
+Y L++ R AG FG EA+ ++ EQ+K +++Q
Sbjct: 302 VYEAASELENTDRGAGGFGSTGQNTMEAEPALKKSKTEQIKTSATSVTIQ 351
>U64854-2|AAK77611.1| 2257|Caenorhabditis elegans Uncoordinated
protein 70, isoform a protein.
Length = 2257
Score = 27.5 bits (58), Expect = 9.1
Identities = 13/48 (27%), Positives = 25/48 (52%)
Frame = +2
Query: 176 NLYEVLKDGTLLCKLVNELQPGSVKKINQTTMAFKCMENINAFLEAVK 319
+LY ++DG +L +L+ L + K M C+EN+ L+ ++
Sbjct: 63 DLYMDMRDGKMLLRLLAVLSGERLPKPTPGKMRIHCLENVEKGLQFLR 110
>U64854-1|AAK77612.2| 2302|Caenorhabditis elegans Uncoordinated
protein 70, isoform b protein.
Length = 2302
Score = 27.5 bits (58), Expect = 9.1
Identities = 13/48 (27%), Positives = 25/48 (52%)
Frame = +2
Query: 176 NLYEVLKDGTLLCKLVNELQPGSVKKINQTTMAFKCMENINAFLEAVK 319
+LY ++DG +L +L+ L + K M C+EN+ L+ ++
Sbjct: 63 DLYMDMRDGKMLLRLLAVLSGERLPKPTPGKMRIHCLENVEKGLQFLR 110
>AF261891-1|AAF72996.1| 2257|Caenorhabditis elegans beta-spectrin
protein.
Length = 2257
Score = 27.5 bits (58), Expect = 9.1
Identities = 13/48 (27%), Positives = 25/48 (52%)
Frame = +2
Query: 176 NLYEVLKDGTLLCKLVNELQPGSVKKINQTTMAFKCMENINAFLEAVK 319
+LY ++DG +L +L+ L + K M C+EN+ L+ ++
Sbjct: 63 DLYMDMRDGKMLLRLLAVLSGERLPKPTPGKMRIHCLENVEKGLQFLR 110
>AF166170-1|AAD49859.1| 2257|Caenorhabditis elegans beta-G spectrin
protein.
Length = 2257
Score = 27.5 bits (58), Expect = 9.1
Identities = 13/48 (27%), Positives = 25/48 (52%)
Frame = +2
Query: 176 NLYEVLKDGTLLCKLVNELQPGSVKKINQTTMAFKCMENINAFLEAVK 319
+LY ++DG +L +L+ L + K M C+EN+ L+ ++
Sbjct: 63 DLYMDMRDGKMLLRLLAVLSGERLPKPTPGKMRIHCLENVEKGLQFLR 110
>AF166169-1|AAD49858.1| 2302|Caenorhabditis elegans beta-G spectrin
protein.
Length = 2302
Score = 27.5 bits (58), Expect = 9.1
Identities = 13/48 (27%), Positives = 25/48 (52%)
Frame = +2
Query: 176 NLYEVLKDGTLLCKLVNELQPGSVKKINQTTMAFKCMENINAFLEAVK 319
+LY ++DG +L +L+ L + K M C+EN+ L+ ++
Sbjct: 63 DLYMDMRDGKMLLRLLAVLSGERLPKPTPGKMRIHCLENVEKGLQFLR 110
>AF002197-3|AAD34660.1| 1451|Caenorhabditis elegans Notch signaling
pathway homologprotein 1 protein.
Length = 1451
Score = 27.5 bits (58), Expect = 9.1
Identities = 17/60 (28%), Positives = 29/60 (48%)
Frame = +2
Query: 20 SDMAEYRAGKAGINAEAQARIHSKYNDEIAQETLEWIRKLTGEPANTSGDADNLYEVLKD 199
+DM G++G A+ E ++ EW++ L E ++S D+D EV+KD
Sbjct: 755 NDMISENGGESGDLESAREEAEGARTLEDGEQD-EWVKALLAEAESSSDDSDE--EVVKD 811
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,134,446
Number of Sequences: 27780
Number of extensions: 287217
Number of successful extensions: 991
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 906
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 983
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1497472076
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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