Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30118
         (666 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    23   2.6  
AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cycl...    22   4.6  
AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cycl...    22   4.6  
AY331183-1|AAP94623.1|  953|Apis mellifera NMDA-type glutamate r...    22   6.0  
AY155490-1|AAO12861.1|  342|Apis mellifera Ammar1 transposase pr...    22   6.0  
AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protei...    22   6.0  
AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.              21   8.0  

>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 10/23 (43%), Positives = 12/23 (52%)
 Frame = +2

Query: 98  DEIAQETLEWIRKLTGEPANTSG 166
           D   +E LEW +   G  ANT G
Sbjct: 19  DTTQEEKLEWTKYPFGAEANTPG 41


>AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 11/36 (30%), Positives = 15/36 (41%)
 Frame = +2

Query: 50  AGINAEAQARIHSKYNDEIAQETLEWIRKLTGEPAN 157
           A +N E Q  +   Y+DEI    +         PAN
Sbjct: 29  AAVNMEGQFLVRQIYDDEITYNIISAAVNRLNIPAN 64


>AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 11/36 (30%), Positives = 15/36 (41%)
 Frame = +2

Query: 50  AGINAEAQARIHSKYNDEIAQETLEWIRKLTGEPAN 157
           A +N E Q  +   Y+DEI    +         PAN
Sbjct: 29  AAVNMEGQFLVRQIYDDEITYNIISAAVNRLNIPAN 64


>AY331183-1|AAP94623.1|  953|Apis mellifera NMDA-type glutamate
           receptor 1 protein.
          Length = 953

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = -3

Query: 85  VDPGLGFGVDASFSCAILGHV 23
           ++ G+G G   SFS  +LG V
Sbjct: 622 LNSGIGEGTPRSFSARVLGMV 642


>AY155490-1|AAO12861.1|  342|Apis mellifera Ammar1 transposase
           protein.
          Length = 342

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 6/18 (33%), Positives = 11/18 (61%)
 Frame = +1

Query: 25  HGRVSRRKSWHQRRSPGQ 78
           +  + R++SW + R P Q
Sbjct: 159 YNNIKRKRSWSRPREPAQ 176


>AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protein
           kinase foraging protein.
          Length = 678

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 9/22 (40%), Positives = 11/22 (50%)
 Frame = +2

Query: 137 LTGEPANTSGDADNLYEVLKDG 202
           LTG P  T GD    Y ++  G
Sbjct: 559 LTGTPPFTGGDPMKTYNIILKG 580


>AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.
          Length = 898

 Score = 21.4 bits (43), Expect = 8.0
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = -1

Query: 111 WAISSLYLLWILAW 70
           W + SL  +WIL W
Sbjct: 596 WYVPSLDQVWILNW 609


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 169,956
Number of Sequences: 438
Number of extensions: 3461
Number of successful extensions: 13
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20099475
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)