Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30115
         (664 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory recept...    26   0.32 
AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory recept...    26   0.32 
EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggeri...    22   5.2  
EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggeri...    22   5.2  

>AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory receptor
           candidate 56 protein.
          Length = 358

 Score = 25.8 bits (54), Expect = 0.32
 Identities = 9/21 (42%), Positives = 12/21 (57%)
 Frame = +3

Query: 108 CHLQCQVHPLLQVCQDWGLVP 170
           C +   +HPL  VC  +GL P
Sbjct: 14  CDVYTAIHPLFYVCTFFGLAP 34


>AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory receptor
           candidate 21 protein.
          Length = 386

 Score = 25.8 bits (54), Expect = 0.32
 Identities = 9/21 (42%), Positives = 12/21 (57%)
 Frame = +3

Query: 108 CHLQCQVHPLLQVCQDWGLVP 170
           C +   +HPL  VC  +GL P
Sbjct: 14  CDVYTAIHPLFYVCTFFGLAP 34


>EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggering
           hormone receptorisoform B protein.
          Length = 451

 Score = 21.8 bits (44), Expect = 5.2
 Identities = 14/38 (36%), Positives = 20/38 (52%), Gaps = 3/38 (7%)
 Frame = +1

Query: 163 WSPSTTADRTST---ISSTSCRWLDYTTINTSKNPSET 267
           +SPSTT   T+T   ++ST     + +T N    PS T
Sbjct: 6   FSPSTTTTTTTTSSALNSTPLIEFNISTSNYLYTPSST 43


>EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggering
           hormone receptorisoform A protein.
          Length = 434

 Score = 21.8 bits (44), Expect = 5.2
 Identities = 14/38 (36%), Positives = 20/38 (52%), Gaps = 3/38 (7%)
 Frame = +1

Query: 163 WSPSTTADRTST---ISSTSCRWLDYTTINTSKNPSET 267
           +SPSTT   T+T   ++ST     + +T N    PS T
Sbjct: 6   FSPSTTTTTTTTSSALNSTPLIEFNISTSNYLYTPSST 43


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 139,887
Number of Sequences: 336
Number of extensions: 3069
Number of successful extensions: 5
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17177325
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)