Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV30115
(664 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_06_1670 - 39007402-39008229,39008320-39008567,39009159-390093... 43 2e-04
10_06_0039 - 9966744-9967535,9968241-9968482,9969021-9969223,996... 42 3e-04
10_01_0100 + 1209424-1209538,1210373-1211073,1211158-1211379,121... 42 3e-04
09_04_0745 + 19884868-19886000,19886110-19886309,19886422-198866... 41 0.001
03_02_0071 + 5425722-5427154,5427259-5427464,5428445-5428686,542... 39 0.003
08_02_0758 + 20848078-20849579,20849660-20849850,20849944-208501... 39 0.004
07_03_0792 - 21541301-21542143,21542426-21542661,21543177-215433... 38 0.005
04_01_0001 + 48461-48625,49314-50491,50620-50816,50896-52076 38 0.007
07_03_1090 + 23891294-23892222,23892317-23892516,23895241-238954... 33 0.15
01_04_0068 + 15693131-15693533,15693604-15693803,15693879-156941... 33 0.20
12_01_0344 + 2647044-2647238,2647452-2647553,2647789-2647911,264... 32 0.35
04_04_0137 - 23053148-23053798,23053911-23054146,23054268-230544... 32 0.47
03_06_0209 - 32377045-32378008,32378086-32378210,32378772-323788... 31 0.82
03_02_0619 + 9904405-9904586,9905315-9906764,9907320-9907509,990... 29 2.5
01_06_0482 - 29672720-29673854,29673941-29676267 29 3.3
04_03_0226 - 12977443-12977895 29 4.4
03_05_0563 - 25651529-25651621,25651712-25651790,25651875-256519... 29 4.4
03_02_0919 - 12392471-12392636,12392740-12392931,12393366-123934... 29 4.4
02_01_0265 - 1754861-1755063,1755186-1755360,1755558-1755653,175... 29 4.4
07_03_0600 + 19866757-19867218,19867920-19868429 28 5.8
11_01_0245 + 1884361-1884400,1884549-1885282 28 7.6
>01_06_1670 -
39007402-39008229,39008320-39008567,39009159-39009364,
39009454-39011054
Length = 960
Score = 43.2 bits (97), Expect = 2e-04
Identities = 30/128 (23%), Positives = 60/128 (46%)
Frame = +2
Query: 266 PAAPMKPLYWTRILAQPSIPTCHGELDSILKPLWLEIEETSLDNIDEFTDLFSRQVIKAP 445
P +KPL+W ++ A +L S ++ E ++ + S K P
Sbjct: 503 PRPKLKPLHWDKVRASSDRVMVWDQLKSSS----FQVNEEMIETLFICNPANSAPP-KEP 557
Query: 446 TKKKVEVKTKIQPVKILDSKRSQNVGILAQSLHVEFSEIENAVYNFDTSVVSLEALQQIY 625
++ + T K+LD K+SQN+ IL ++L+V ++ +A+ +T E L+ +
Sbjct: 558 ATRRPVLPTPKTDNKVLDPKKSQNIAILLRALNVSKEQVCDALCEGNTENFGAELLETLL 617
Query: 626 ELRASEEE 649
++ ++EE
Sbjct: 618 KMAPTKEE 625
>10_06_0039 -
9966744-9967535,9968241-9968482,9969021-9969223,
9969333-9970645
Length = 849
Score = 42.3 bits (95), Expect = 3e-04
Identities = 29/129 (22%), Positives = 63/129 (48%)
Frame = +2
Query: 263 KPAAPMKPLYWTRILAQPSIPTCHGELDSILKPLWLEIEETSLDNIDEFTDLFSRQVIKA 442
+P +KPL+W ++ + D + L L+ + + ++ T + R
Sbjct: 411 EPRPKLKPLHWDKVRTS-------SDRDMVWDRLKLDEDMIEVLFMNNSTAVAPRM---- 459
Query: 443 PTKKKVEVKTKIQPVKILDSKRSQNVGILAQSLHVEFSEIENAVYNFDTSVVSLEALQQI 622
KKV + Q ++LD K++QN+ IL ++L+V E+ +A+ + + + E L+ +
Sbjct: 460 DNPKKVGMPQFKQEERVLDPKKAQNIAILLRALNVTLEEVTDALLDGNAECLGAELLETL 519
Query: 623 YELRASEEE 649
++ ++EE
Sbjct: 520 VKMAPTKEE 528
>10_01_0100 + 1209424-1209538,1210373-1211073,1211158-1211379,
1211452-1211878,1212091-1213219,1213623-1213746,
1214207-1214278,1215480-1215578,1215617-1215640,
1215704-1215745,1215815-1215895,1215983-1216114,
1216115-1216196,1216271-1216365,1218499-1218570,
1218676-1218792,1219379-1219447,1219521-1219587,
1219886-1220025
Length = 1269
Score = 42.3 bits (95), Expect = 3e-04
Identities = 34/144 (23%), Positives = 68/144 (47%), Gaps = 5/144 (3%)
Frame = +2
Query: 248 RKTPVKPAAPMKPLYWTRILAQPSIPTCHGELDSILKPLWLEIEETSLDNIDEFTDLFSR 427
+ P K A+ +KPL+W ++ G L + + +D + E LFS
Sbjct: 828 QSNPPKKAS-LKPLHWVKVTR-----AMQGSLWEDAQKQGNQARAPDID-LSELESLFST 880
Query: 428 QVI-----KAPTKKKVEVKTKIQPVKILDSKRSQNVGILAQSLHVEFSEIENAVYNFDTS 592
V K TK+ + +K + V ++D +R+ N I+ + + ++ NA+ DTS
Sbjct: 881 AVATNASEKGGTKRGSAI-SKPEIVHLVDMRRANNCEIMLTKIKMPLPDMINAILALDTS 939
Query: 593 VVSLEALQQIYELRASEEELAMIK 664
V+ + ++ + + ++EE+ M+K
Sbjct: 940 VLDNDQVENLIKFCPTKEEIEMLK 963
>09_04_0745 +
19884868-19886000,19886110-19886309,19886422-19886666,
19886880-19887668
Length = 788
Score = 40.7 bits (91), Expect = 0.001
Identities = 32/130 (24%), Positives = 59/130 (45%), Gaps = 1/130 (0%)
Frame = +2
Query: 278 MKPLYWTRIL-AQPSIPTCHGELDSILKPLWLEIEETSLDNIDEFTDLFSRQVIKAPTKK 454
+KPL+W ++ A PT +L K + E ++ + F +R+ K K+
Sbjct: 350 LKPLHWDKVRPASSGRPTVWDQL----KASSFRVNEEMIETL--FVSNSTRRASKNGVKE 403
Query: 455 KVEVKTKIQPVKILDSKRSQNVGILAQSLHVEFSEIENAVYNFDTSVVSLEALQQIYELR 634
Q K+LD K+SQN+ I+ ++L E+ A+ + + E L+ + ++
Sbjct: 404 -ANAACCNQENKVLDPKKSQNIAIMLRALDATKEEVCKALLDGQAESLGTELLETLLKMA 462
Query: 635 ASEEELAMIK 664
S EE +K
Sbjct: 463 PSREEEIKLK 472
>03_02_0071 +
5425722-5427154,5427259-5427464,5428445-5428686,
5428788-5429570
Length = 887
Score = 39.1 bits (87), Expect = 0.003
Identities = 18/67 (26%), Positives = 40/67 (59%)
Frame = +2
Query: 449 KKKVEVKTKIQPVKILDSKRSQNVGILAQSLHVEFSEIENAVYNFDTSVVSLEALQQIYE 628
+K V + Q ++LD K++QN+ IL ++L+V E+ +A+ + + + E L+ + +
Sbjct: 503 RKAAGVPSFRQEERVLDPKKAQNIAILLRALNVTREEVSDALLDGNAECLGSELLETLVK 562
Query: 629 LRASEEE 649
+ ++EE
Sbjct: 563 MAPTKEE 569
>08_02_0758 +
20848078-20849579,20849660-20849850,20849944-20850179,
20850254-20850973
Length = 882
Score = 38.7 bits (86), Expect = 0.004
Identities = 34/133 (25%), Positives = 62/133 (46%), Gaps = 4/133 (3%)
Frame = +2
Query: 266 PAAPMKPLYWTRILAQPSIPTCHGELDSILKPLWLEIEETSLD-NIDE--FTDLFSRQVI 436
P +KPL+W ++ A P+ +W +I +S + DE LF+ +
Sbjct: 468 PLPRLKPLHWDKVRAAPN-----------RSMVWNDIRSSSFEFEFDEQMIKSLFAYNLQ 516
Query: 437 KAPTKKKVEVKTKIQPVKILDSKRSQNVGILAQSLHVEFSEIENAVYNFD-TSVVSLEAL 613
+ ++ KT +++ R QN IL ++L+ S++ N+V + SV LEAL
Sbjct: 517 GSMKDEEAMNKTASTTKHVIEHHRLQNTTILLKTLNANTSQVCNSVIQGNGLSVQQLEAL 576
Query: 614 QQIYELRASEEEL 652
++ + EE+L
Sbjct: 577 VKMKPTKEEEEKL 589
>07_03_0792 -
21541301-21542143,21542426-21542661,21543177-21543373,
21543459-21544173,21544250-21544892,21545970-21546139,
21546442-21546943
Length = 1101
Score = 38.3 bits (85), Expect = 0.005
Identities = 26/99 (26%), Positives = 48/99 (48%)
Frame = +2
Query: 278 MKPLYWTRILAQPSIPTCHGELDSILKPLWLEIEETSLDNIDEFTDLFSRQVIKAPTKKK 457
+KP +W ++ A P+ + LK + E ++N+ + + TKK
Sbjct: 650 LKPFFWDKVTANPA----RSMVWDHLKSGSFQFNEQLMENLFGYNSTDK----SSDTKKD 701
Query: 458 VEVKTKIQPVKILDSKRSQNVGILAQSLHVEFSEIENAV 574
+ K Q ++ILD K++QN+ I ++L V E+ +AV
Sbjct: 702 LSSKDATQLIRILDPKKAQNLAISLRALGVSPQEVCSAV 740
>04_01_0001 + 48461-48625,49314-50491,50620-50816,50896-52076
Length = 906
Score = 37.9 bits (84), Expect = 0.007
Identities = 30/104 (28%), Positives = 49/104 (47%), Gaps = 3/104 (2%)
Frame = +2
Query: 272 APMKPLYWTRILAQPSIPTCHGELDSILKPLWLEIEETSLDNIDEFTD-LFSRQVI--KA 442
A +KP +W ++ A P+ +W +I+ S +E + LF Q K+
Sbjct: 419 AKLKPFFWDKVTANPNQAM-----------VWDQIKAGSFQFNEEMIESLFGAQSTEKKS 467
Query: 443 PTKKKVEVKTKIQPVKILDSKRSQNVGILAQSLHVEFSEIENAV 574
KK K Q V+ILD K++QN+ I ++L V ++ AV
Sbjct: 468 TDAKKESGKEATQFVRILDPKKAQNLAISLKALSVSAEQVRAAV 511
>07_03_1090 +
23891294-23892222,23892317-23892516,23895241-23895482,
23895771-23896461,23896486-23896562
Length = 712
Score = 33.5 bits (73), Expect = 0.15
Identities = 18/62 (29%), Positives = 34/62 (54%)
Frame = +2
Query: 479 QPVKILDSKRSQNVGILAQSLHVEFSEIENAVYNFDTSVVSLEALQQIYELRASEEELAM 658
Q ++LD KR QNV I+ +SL+V E+ A+ + + E + + ++ ++EE
Sbjct: 343 QERRLLDPKRLQNVAIMLKSLNVAADEVIGALVRGNPEDLGSEFYETLAKMAPTKEEELK 402
Query: 659 IK 664
+K
Sbjct: 403 LK 404
>01_04_0068 +
15693131-15693533,15693604-15693803,15693879-15694162,
15694251-15694428
Length = 354
Score = 33.1 bits (72), Expect = 0.20
Identities = 26/87 (29%), Positives = 39/87 (44%), Gaps = 6/87 (6%)
Frame = +1
Query: 40 GTTSTANARDGSTSSTYARHNPYATCNARCTPSSRYARIGAWSPSTTADRTS--TISS-- 207
G ST + T + H P+AT CT SS + + + S+ + TS TISS
Sbjct: 42 GDASTRHKPRHYTVAQAVHHPPWATSGVSCTISSGSSATSSCTISSGSSATSSCTISSSS 101
Query: 208 --TSCRWLDYTTINTSKNPSETCCPNE 282
+S + T +PS T CP++
Sbjct: 102 SGSSTSTVSACTSQDKVSPSSTACPHK 128
>12_01_0344 +
2647044-2647238,2647452-2647553,2647789-2647911,
2648066-2648183,2649022-2649347
Length = 287
Score = 32.3 bits (70), Expect = 0.35
Identities = 18/66 (27%), Positives = 29/66 (43%)
Frame = +1
Query: 133 PSSRYARIGAWSPSTTADRTSTISSTSCRWLDYTTINTSKNPSETCCPNETFILDTYFSS 312
P+S +G + A R S+ SS+SC W D+ I ++ PS F+
Sbjct: 11 PASPCVVLGDDAADAAAVRVSSSSSSSCLWFDWFAIRCARAPSFAFALKRVFVWVVAKVD 70
Query: 313 TQYSNM 330
+Y +M
Sbjct: 71 RKYGSM 76
>04_04_0137 -
23053148-23053798,23053911-23054146,23054268-23054458,
23054587-23056010
Length = 833
Score = 31.9 bits (69), Expect = 0.47
Identities = 31/133 (23%), Positives = 61/133 (45%), Gaps = 3/133 (2%)
Frame = +2
Query: 266 PAAPMKPLYWTRILAQPSIPTCHGELDSILKPLWLEIEETSLDNIDE--FTDLFSRQVIK 439
P +KPL+W ++ A P+ + +W I +S + +DE LF
Sbjct: 444 PLPKLKPLHWDKVRAAPN-----------RRMVWDRIRSSSFE-LDEKMIESLFGYNARC 491
Query: 440 APTKKKVEVKTKIQPVKILDSKRSQNVGILAQSLHVEFSEIENA-VYNFDTSVVSLEALQ 616
+ ++V+ ++ +LD+KR QN IL +++ +I A ++ S LEAL
Sbjct: 492 STKHEEVQSRSPSLGHHVLDTKRLQNFTILMKAVSATAEQIFAALLHGNGLSAQQLEALI 551
Query: 617 QIYELRASEEELA 655
++ + ++L+
Sbjct: 552 KMAPAKDEADKLS 564
>03_06_0209 -
32377045-32378008,32378086-32378210,32378772-32378816,
32379009-32379295,32379778-32381509,32381631-32381971,
32383753-32383876,32384484-32384722,32385156-32385534
Length = 1411
Score = 31.1 bits (67), Expect = 0.82
Identities = 16/59 (27%), Positives = 27/59 (45%)
Frame = +1
Query: 151 RIGAWSPSTTADRTSTISSTSCRWLDYTTINTSKNPSETCCPNETFILDTYFSSTQYSN 327
R+ + P+T A R SS +C + ++ K E+C + F T +S + SN
Sbjct: 192 RLATYKPTTWASRPKAASSLACARRGWVNVDMDKIECESCGAHLIFSTLTSWSPAEVSN 250
>03_02_0619 +
9904405-9904586,9905315-9906764,9907320-9907509,
9909578-9910164
Length = 802
Score = 29.5 bits (63), Expect = 2.5
Identities = 16/50 (32%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Frame = +2
Query: 236 RSTLRKTPV-KPAAPMKPLYWTRILAQPSIPTCHGELDSILKPLWLEIEE 382
+S+ R PV P P++ ++ T + Q + H + D +L P WLE+ E
Sbjct: 722 KSSRRCCPVWGPEGPVEVVWQTMVRRQEELAVGHPD-DKVLDPEWLEVGE 770
>01_06_0482 - 29672720-29673854,29673941-29676267
Length = 1153
Score = 29.1 bits (62), Expect = 3.3
Identities = 20/93 (21%), Positives = 45/93 (48%), Gaps = 1/93 (1%)
Frame = +2
Query: 347 SILKPLWLEIEETSLDNIDEFTDLFSRQVIKAPTKKKVEVKTKIQPVKILDSKRSQNVGI 526
SI W+ ++ +D ++FTD S+ ++ A K +E+ + Q V + + + G+
Sbjct: 906 SITLDEWMRLDSGIVDEDEQFTDRTSK-ILAAHHAKSMELVAENQNVDKKNRRSGRRWGL 964
Query: 527 LAQSLHVEFS-EIENAVYNFDTSVVSLEALQQI 622
L + V ++ + + N++ + AL Q+
Sbjct: 965 LGNNFTVALMVQLRDPLRNYEPVGTPMLALIQV 997
>04_03_0226 - 12977443-12977895
Length = 150
Score = 28.7 bits (61), Expect = 4.4
Identities = 13/28 (46%), Positives = 15/28 (53%), Gaps = 6/28 (21%)
Frame = -1
Query: 145 TWRRGCTWH-----CRWHRGYAW-HRWR 80
TWRRG W C+ R +AW RWR
Sbjct: 59 TWRRGSQWRRTWRGCQRRRSWAWRRRWR 86
>03_05_0563 -
25651529-25651621,25651712-25651790,25651875-25651920,
25652001-25652264,25652361-25652484,25652727-25652780,
25653589-25653657,25653752-25654021
Length = 332
Score = 28.7 bits (61), Expect = 4.4
Identities = 21/63 (33%), Positives = 29/63 (46%)
Frame = +1
Query: 133 PSSRYARIGAWSPSTTADRTSTISSTSCRWLDYTTINTSKNPSETCCPNETFILDTYFSS 312
P +YA +P T + T I STS +T T K S T P++T I + Y S
Sbjct: 179 PIQKYALSSHITPRLTPEATPKIMSTSASPRRMSTTATPKLMSGTTSPSKTRI-EGYMSM 237
Query: 313 TQY 321
T +
Sbjct: 238 TPW 240
>03_02_0919 -
12392471-12392636,12392740-12392931,12393366-12393463,
12393719-12394219,12394287-12394532,12395627-12396029,
12396155-12396348,12396755-12396925,12397064-12397366,
12397463-12397520,12397678-12397757,12398910-12398987,
12399530-12399613,12399692-12399757,12399908-12399980,
12400080-12400249,12400368-12400427,12400632-12400679,
12401217-12401255,12401364-12401372
Length = 1012
Score = 28.7 bits (61), Expect = 4.4
Identities = 17/64 (26%), Positives = 31/64 (48%), Gaps = 7/64 (10%)
Frame = +1
Query: 151 RIGAWSPSTTADRTSTISSTSCRWLDYTTINTSKNPSETCCPNETFI-------LDTYFS 309
R+ AW + D+ T+ S + RW+ + + + ++ P + FI LDT+FS
Sbjct: 497 RVPAWYVTLEDDQEKTLGSDNDRWIVAKSESAASVEAQKSYPGKKFILNQDPDVLDTWFS 556
Query: 310 STQY 321
S +
Sbjct: 557 SALF 560
>02_01_0265 -
1754861-1755063,1755186-1755360,1755558-1755653,
1756110-1756256,1756343-1756511,1756661-1756812,
1756898-1756968,1757064-1757247,1757332-1757523,
1757664-1757771
Length = 498
Score = 28.7 bits (61), Expect = 4.4
Identities = 25/118 (21%), Positives = 57/118 (48%), Gaps = 4/118 (3%)
Frame = +2
Query: 311 QPSIPTCHGELDSILKPLWLEIEETSLDNIDEFT----DLFSRQVIKAPTKKKVEVKTKI 478
+ S+ +++ I + ++ +E + ID+ T DL SR + K+ + K
Sbjct: 37 EKSLDNIRNQIEQIQSGIAMKNDEMGTELIDQLTSEERDLLSRLNPEITELKEKFLLCKN 96
Query: 479 QPVKILDSKRSQNVGILAQSLHVEFSEIENAVYNFDTSVVSLEALQQIYELRASEEEL 652
++I ++++ + L+ +L E+E + + D+ + LEA + EL++S+ L
Sbjct: 97 SRIEI-ETRKEELETNLSTNLMRRQKELEAIISSADSKTLPLEAESKEQELKSSKRSL 153
>07_03_0600 + 19866757-19867218,19867920-19868429
Length = 323
Score = 28.3 bits (60), Expect = 5.8
Identities = 10/22 (45%), Positives = 16/22 (72%)
Frame = -3
Query: 326 LEYWVELKYVSNIKVSLGQQVS 261
L+YW++ Y+SN +GQQV+
Sbjct: 135 LQYWMDESYLSNAFAPMGQQVT 156
>11_01_0245 + 1884361-1884400,1884549-1885282
Length = 257
Score = 27.9 bits (59), Expect = 7.6
Identities = 10/34 (29%), Positives = 16/34 (47%)
Frame = -1
Query: 169 GTRPQSWHTWRRGCTWHCRWHRGYAWHRWRRWTH 68
GT+ +SW+ W + C+ W A W W +
Sbjct: 170 GTKHESWNEWSKNCS---GWGSALADSSWGNWNN 200
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,818,955
Number of Sequences: 37544
Number of extensions: 283530
Number of successful extensions: 964
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 928
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 959
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1667659452
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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