Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30115
         (664 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor pro...    24   1.1  
DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor pro...    24   1.1  
AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled rec...    24   1.1  
AY155490-1|AAO12861.1|  342|Apis mellifera Ammar1 transposase pr...    24   1.5  
DQ026037-1|AAY87896.1|  431|Apis mellifera nicotinic acetylcholi...    23   2.0  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             23   2.6  

>DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 8/27 (29%), Positives = 14/27 (51%)
 Frame = +3

Query: 69  WVHLLHLCQA*PLCHLQCQVHPLLQVC 149
           W+  +HLC+    C + C    +L +C
Sbjct: 102 WIFGIHLCKLWLTCDVLCCTASILNLC 128



 Score = 22.2 bits (45), Expect = 4.5
 Identities = 5/11 (45%), Positives = 9/11 (81%)
 Frame = +3

Query: 9   WVRPLHLCQVW 41
           W+  +HLC++W
Sbjct: 102 WIFGIHLCKLW 112


>DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 8/27 (29%), Positives = 14/27 (51%)
 Frame = +3

Query: 69  WVHLLHLCQA*PLCHLQCQVHPLLQVC 149
           W+  +HLC+    C + C    +L +C
Sbjct: 102 WIFGIHLCKLWLTCDVLCCTASILNLC 128



 Score = 22.2 bits (45), Expect = 4.5
 Identities = 5/11 (45%), Positives = 9/11 (81%)
 Frame = +3

Query: 9   WVRPLHLCQVW 41
           W+  +HLC++W
Sbjct: 102 WIFGIHLCKLW 112


>AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled
           receptor protein.
          Length = 399

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 8/27 (29%), Positives = 14/27 (51%)
 Frame = +3

Query: 69  WVHLLHLCQA*PLCHLQCQVHPLLQVC 149
           W+  +HLC+    C + C    +L +C
Sbjct: 102 WIFGIHLCKLWLTCDVLCCTASILNLC 128



 Score = 22.2 bits (45), Expect = 4.5
 Identities = 5/11 (45%), Positives = 9/11 (81%)
 Frame = +3

Query: 9   WVRPLHLCQVW 41
           W+  +HLC++W
Sbjct: 102 WIFGIHLCKLW 112


>AY155490-1|AAO12861.1|  342|Apis mellifera Ammar1 transposase
           protein.
          Length = 342

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 11/26 (42%), Positives = 15/26 (57%)
 Frame = +2

Query: 491 ILDSKRSQNVGILAQSLHVEFSEIEN 568
           I+DS R      +A+ LHV  + IEN
Sbjct: 77  IIDSDRHSTTREIAEKLHVSHTCIEN 102


>DQ026037-1|AAY87896.1|  431|Apis mellifera nicotinic acetylcholine
           receptor alpha9subunit protein.
          Length = 431

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 12/41 (29%), Positives = 23/41 (56%), Gaps = 2/41 (4%)
 Frame = +1

Query: 205 STSCRWLDYTTINTSKN-PSETCCPNETFILDTY-FSSTQY 321
           + + +W D+  I  +K      CCPN+T+ +  Y FS +++
Sbjct: 212 TNNSKW-DFKVIKATKVLKMYACCPNDTYPMIVYEFSISRH 251


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 19/93 (20%), Positives = 39/93 (41%), Gaps = 4/93 (4%)
 Frame = +1

Query: 28  YARYGTTSTANARDGSTSSTYARHNPYATCNARCTP-SSRYARIGA---WSPSTTADRTS 195
           + +Y  T  +  R   + +  A H  Y   ++ C P      +IG+     P+++    +
Sbjct: 46  WKQYQDTLYSGTRSSESLTAQAHHRLYPAFSSSCDPVPGNLEQIGSRPLHPPASSTSLPA 105

Query: 196 TISSTSCRWLDYTTINTSKNPSETCCPNETFIL 294
           TI++T+      TT  T+   + T     T ++
Sbjct: 106 TITTTTT-----TTTTTTATAAATATTTATGLI 133


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 154,828
Number of Sequences: 438
Number of extensions: 3293
Number of successful extensions: 14
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 19977660
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)