Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV30114
(724 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g15860.2 68418.m01856 expressed protein 46 3e-05
At5g15860.1 68418.m01855 expressed protein 46 3e-05
At3g02410.1 68416.m00228 hypothetical protein weak similarity to... 45 4e-05
At5g23530.1 68418.m02761 expressed protein contains similarity t... 39 0.003
At1g26120.1 68414.m03188 esterase-related contains similaity to ... 39 0.004
At3g27320.1 68416.m03414 expressed protein low similarity to PrM... 38 0.009
At1g49660.1 68414.m05569 expressed protein 38 0.009
At1g68620.1 68414.m07841 expressed protein similar to PrMC3 [Pin... 37 0.016
At5g14310.1 68418.m01673 expressed protein low similarity to PrM... 36 0.027
At5g27320.1 68418.m03262 expressed protein similar to PrMC3 [Pin... 36 0.036
At5g16080.1 68418.m01879 expressed protein similar to PrMC3 [Pin... 36 0.036
At3g63010.1 68416.m07078 expressed protein similar to PrMC3 [Pin... 36 0.036
At3g05120.1 68416.m00556 expressed protein low similarity to PrM... 35 0.047
At5g06570.2 68418.m00742 expressed protein similar to PrMC3 [Pin... 33 0.14
At5g06570.1 68418.m00741 expressed protein similar to PrMC3 [Pin... 33 0.14
At2g45600.1 68415.m05670 expressed protein low similarity to PrM... 33 0.25
At1g47480.1 68414.m05267 expressed protein similar to PrMC3 [Pin... 33 0.25
At1g49650.1 68414.m05568 cell death associated protein-related s... 31 0.58
At2g03550.1 68415.m00315 expressed protein similar to PrMC3 [Pin... 31 0.77
At5g13100.1 68418.m01501 expressed protein 30 1.4
At1g50300.1 68414.m05639 zinc finger (Ran-binding) family protei... 30 1.4
At4g21430.1 68417.m03097 transcription factor jumonji (jmjC) dom... 30 1.8
At3g48690.1 68416.m05317 expressed protein similar to PrMC3 [Pin... 30 1.8
At3g59030.1 68416.m06579 transparent testa 12 protein (TT12) / m... 29 2.4
At5g62180.1 68418.m07805 expressed protein similar to PrMC3, Pin... 29 3.1
At3g23710.1 68416.m02981 chloroplast inner membrane import prote... 29 3.1
At1g58227.1 68414.m06616 hypothetical protein 29 3.1
At1g19190.1 68414.m02389 expressed protein contains similarity t... 29 4.1
At3g52250.1 68416.m05742 myb family transcription factor contain... 28 5.5
At3g59610.1 68416.m06651 F-box family protein / jacalin lectin f... 28 7.2
At1g12350.1 68414.m01427 DNA/panthothenate metabolism flavoprote... 28 7.2
At1g12050.1 68414.m01391 fumarylacetoacetase, putative similar t... 28 7.2
At5g03280.1 68418.m00277 ethylene-insensitive 2 (EIN2) identical... 27 9.5
At3g48700.1 68416.m05318 expressed protein similar to PrMC3 [Pin... 27 9.5
At3g07390.1 68416.m00881 auxin-responsive protein / auxin-induce... 27 9.5
At2g38080.1 68415.m04674 laccase, putative / diphenol oxidase, p... 27 9.5
>At5g15860.2 68418.m01856 expressed protein
Length = 299
Score = 46.0 bits (104), Expect = 3e-05
Identities = 35/113 (30%), Positives = 58/113 (51%), Gaps = 5/113 (4%)
Frame = +1
Query: 400 GDENCLFLNVYTPSTDGAFLPVMIWIHGG----GFK-WGSGNTNLYGPDFLVDRDVVVMT 564
GD+ L++Y PS + PV++++ GG G+K WGS L G L +RD++V
Sbjct: 136 GDQPRNRLDLYLPSNNDGLKPVVVFVTGGAWIIGYKAWGS----LLGMQ-LAERDIIVAC 190
Query: 565 INYRCGALGFLSLNTPEVPGNAGIKDIVQAIRWVKDNIHHFGGNAGNLTIFGE 723
++YR N P+ + + D Q I +V +NI FGG+ + + G+
Sbjct: 191 LDYR---------NFPQGTISDMVTDASQGISFVCNNISAFGGDPNRIYLMGQ 234
>At5g15860.1 68418.m01855 expressed protein
Length = 427
Score = 46.0 bits (104), Expect = 3e-05
Identities = 35/113 (30%), Positives = 58/113 (51%), Gaps = 5/113 (4%)
Frame = +1
Query: 400 GDENCLFLNVYTPSTDGAFLPVMIWIHGG----GFK-WGSGNTNLYGPDFLVDRDVVVMT 564
GD+ L++Y PS + PV++++ GG G+K WGS L G L +RD++V
Sbjct: 136 GDQPRNRLDLYLPSNNDGLKPVVVFVTGGAWIIGYKAWGS----LLGMQ-LAERDIIVAC 190
Query: 565 INYRCGALGFLSLNTPEVPGNAGIKDIVQAIRWVKDNIHHFGGNAGNLTIFGE 723
++YR N P+ + + D Q I +V +NI FGG+ + + G+
Sbjct: 191 LDYR---------NFPQGTISDMVTDASQGISFVCNNISAFGGDPNRIYLMGQ 234
>At3g02410.1 68416.m00228 hypothetical protein weak similarity to
kynurenine formamidase [Mus musculus] GI:21552719
Length = 422
Score = 45.2 bits (102), Expect = 4e-05
Identities = 33/106 (31%), Positives = 54/106 (50%), Gaps = 5/106 (4%)
Frame = +1
Query: 421 LNVYTPSTDGAFLPVMIWIHGG----GFK-WGSGNTNLYGPDFLVDRDVVVMTINYRCGA 585
L++Y P T PV++++ GG G+K WGS L G L +RD++V ++YR
Sbjct: 138 LDLYIPPTSDGLKPVVVFVTGGAWIIGYKAWGS----LLGLQ-LAERDIIVACLDYR--- 189
Query: 586 LGFLSLNTPEVPGNAGIKDIVQAIRWVKDNIHHFGGNAGNLTIFGE 723
N P+ + + D Q I +V +NI FGG+ + + G+
Sbjct: 190 ------NFPQGTISDMVSDAAQGISFVCNNISAFGGDPNRIYLMGQ 229
>At5g23530.1 68418.m02761 expressed protein contains similarity to
PrMC3 [Pinus radiata] GI:5487873
Length = 335
Score = 39.1 bits (87), Expect = 0.003
Identities = 23/73 (31%), Positives = 38/73 (52%), Gaps = 4/73 (5%)
Frame = +1
Query: 370 IDPVFAKSYVGDENC-LFLNVYTPSTDGAFLPVMIWIHGGGFKWGSGNTNLYG---PDFL 537
++ V +V D++ L+ +YTP G +PV+++ HGGGF + S N Y F
Sbjct: 57 VNIVSTSDFVVDQSRDLWFRLYTPHVSGDKIPVVVFFHGGGFAFLSPNAYPYDNVCRRFA 116
Query: 538 VDRDVVVMTINYR 576
V+++NYR
Sbjct: 117 RKLPAYVISVNYR 129
>At1g26120.1 68414.m03188 esterase-related contains similaity to
esterase 6 GI:606998 from [Drosophila simulans] and
esterase GI:12584120 from [Sphingomonas elodea]
Length = 476
Score = 38.7 bits (86), Expect = 0.004
Identities = 36/122 (29%), Positives = 59/122 (48%), Gaps = 6/122 (4%)
Frame = +1
Query: 376 PVFAKSYV-GDENCLFLNVYTPSTDGAFLPVMIWIHGG----GFK-WGSGNTNLYGPDFL 537
P +S V GD+ L++Y P PV+ ++ GG G+K WGS L G L
Sbjct: 178 PYVRRSIVYGDQPRNRLDLYLPKNSTGPKPVVAFVTGGAWIIGYKAWGS----LLGQQ-L 232
Query: 538 VDRDVVVMTINYRCGALGFLSLNTPEVPGNAGIKDIVQAIRWVKDNIHHFGGNAGNLTIF 717
+RD++V I+YR N P+ + +KD I +V ++I +GG+ + +
Sbjct: 233 SERDIIVACIDYR---------NFPQGSISDMVKDASSGISFVCNHIAEYGGDPDRIYLM 283
Query: 718 GE 723
G+
Sbjct: 284 GQ 285
>At3g27320.1 68416.m03414 expressed protein low similarity to PrMC3
[Pinus radiata] GI:5487873
Length = 460
Score = 37.5 bits (83), Expect = 0.009
Identities = 22/57 (38%), Positives = 30/57 (52%), Gaps = 8/57 (14%)
Frame = +1
Query: 430 YTPSTDGAF---LPVMIWIHGGGFKWGSGNTNLYGPDFLVDR-----DVVVMTINYR 576
Y PS+ G LPVM+ HGGG W SG+ + DF R D++V+ + YR
Sbjct: 154 YAPSSSGGNSRKLPVMLQFHGGG--WVSGSNDSVANDFFCRRMAKHCDIIVLAVGYR 208
>At1g49660.1 68414.m05569 expressed protein
Length = 319
Score = 37.5 bits (83), Expect = 0.009
Identities = 34/110 (30%), Positives = 55/110 (50%), Gaps = 9/110 (8%)
Frame = +1
Query: 364 AQIDPVF---AKSYV-GDENCLFLNVYTPS-----TDGAFLPVMIWIHGGGFKWGSGNTN 516
A +DP + +K + EN L + ++ P T G LP++I+IHGG + S +
Sbjct: 32 ASLDPTYDVVSKDVIYSPENNLSVRLFLPHKSTKLTAGNKLPLLIYIHGGAWIIESPFSP 91
Query: 517 LYGPDFLVDRDVVVMTINYRCGALGFLSLNTPEVPGNAGIKDIVQAIRWV 666
LY ++L + VV + N C A+ PE P A +D+ AI+W+
Sbjct: 92 LY-HNYLTE---VVKSAN--CLAVSVQYRRAPEDPVPAAYEDVWSAIQWI 135
>At1g68620.1 68414.m07841 expressed protein similar to PrMC3 [Pinus
radiata] GI:5487873
Length = 336
Score = 36.7 bits (81), Expect = 0.016
Identities = 28/88 (31%), Positives = 44/88 (50%), Gaps = 4/88 (4%)
Frame = +1
Query: 415 LFLNVYTPSTDGAFLPVMIWIHGGGFKWGSGNTNLYGPDFLVDRDV----VVMTINYRCG 582
L++ + T + + LP++++ HGGGF GS + Y +FL +VM++NYR
Sbjct: 75 LYVPMTTTKSSVSKLPLIVYFHGGGFCVGSASWLCY-HEFLARLSARSRCLVMSVNYRL- 132
Query: 583 ALGFLSLNTPEVPGNAGIKDIVQAIRWV 666
PE P A +D V AI W+
Sbjct: 133 --------APENPLPAAYEDGVNAILWL 152
>At5g14310.1 68418.m01673 expressed protein low similarity to PrMC3
[Pinus radiata] GI:5487873
Length = 446
Score = 35.9 bits (79), Expect = 0.027
Identities = 22/56 (39%), Positives = 30/56 (53%), Gaps = 7/56 (12%)
Frame = +1
Query: 430 YTPST--DGAFLPVMIWIHGGGFKWGSGNTNLYGPDFLVDR-----DVVVMTINYR 576
Y PS + LPVM+ HGGG W SG+++ DF R DV+V+ + YR
Sbjct: 140 YAPSAKRNSRKLPVMLQFHGGG--WVSGSSDSAANDFFCRRIAKVCDVIVLAVGYR 193
>At5g27320.1 68418.m03262 expressed protein similar to PrMC3 [Pinus
radiata] GI:5487873
Length = 344
Score = 35.5 bits (78), Expect = 0.036
Identities = 20/49 (40%), Positives = 29/49 (59%), Gaps = 5/49 (10%)
Frame = +1
Query: 445 DGAFLPVMIWIHGGGFKWGSGNTNLYGPDFLVDRDV-----VVMTINYR 576
DG +PV+++ HGG F S N+ +Y D L R V VV+++NYR
Sbjct: 100 DGEIVPVIVFFHGGSFAHSSANSAIY--DTLCRRLVGLCGAVVVSVNYR 146
>At5g16080.1 68418.m01879 expressed protein similar to PrMC3 [Pinus
radiata] GI:5487873
Length = 344
Score = 35.5 bits (78), Expect = 0.036
Identities = 34/104 (32%), Positives = 45/104 (43%), Gaps = 9/104 (8%)
Frame = +1
Query: 409 NCLFLNVYTPSTDGAF----LPVMIWIHGGGFKWGSGNTNLYGPDFLVDRDV----VVMT 564
N + VY P A LP++++ HGGGF GS + Y DFL V V+++
Sbjct: 72 NDTWTRVYIPDAAAASPSVTLPLLVYFHGGGFCVGSAAWSCY-HDFLTSLAVKARCVIVS 130
Query: 565 INYRCGALGFLSLNTPEVPGNAGIKDIVQAIRW-VKDNIHHFGG 693
+NYR PE A D V + W VK I GG
Sbjct: 131 VNYRL---------APEHRLPAAYDDGVNVVSWLVKQQISTGGG 165
>At3g63010.1 68416.m07078 expressed protein similar to PrMC3 [Pinus
radiata] GI:5487873
Length = 358
Score = 35.5 bits (78), Expect = 0.036
Identities = 26/102 (25%), Positives = 44/102 (43%), Gaps = 3/102 (2%)
Frame = +1
Query: 421 LNVYTPSTDGAFLPVMIWIHGGGFKWGSGNTNLYGP---DFLVDRDVVVMTINYRCGALG 591
L + P + +PV+I+ HGG F S N+ +Y + VVV++++YR
Sbjct: 94 LELTKPLSTTEIVPVLIFFHGGSFTHSSANSAIYDTFCRRLVTICGVVVVSVDYR----- 148
Query: 592 FLSLNTPEVPGNAGIKDIVQAIRWVKDNIHHFGGNAGNLTIF 717
+PE D A+ WVK + G N+ ++
Sbjct: 149 ----RSPEHRYPCAYDDGWNALNWVKSRVWLQSGKDSNVYVY 186
>At3g05120.1 68416.m00556 expressed protein low similarity to PrMC3
[Pinus radiata] GI:5487873
Length = 345
Score = 35.1 bits (77), Expect = 0.047
Identities = 23/71 (32%), Positives = 35/71 (49%), Gaps = 5/71 (7%)
Frame = +1
Query: 379 VFAKSYVGDENCLFLNVYTPSTDGAFLPVMIWIHGGGFKWGSGNTNLYGPDFLVDRDV-- 552
V+ +Y E + DG +PV+++ HGG F S N+ +Y D L R V
Sbjct: 80 VYRPAYADQEQPPSILDLEKPVDGDIVPVILFFHGGSFAHSSANSAIY--DTLCRRLVGL 137
Query: 553 ---VVMTINYR 576
VV+++NYR
Sbjct: 138 CKCVVVSVNYR 148
>At5g06570.2 68418.m00742 expressed protein similar to PrMC3 [Pinus
radiata] GI:5487873
Length = 329
Score = 33.5 bits (73), Expect = 0.14
Identities = 17/44 (38%), Positives = 26/44 (59%), Gaps = 2/44 (4%)
Frame = +1
Query: 379 VFAKSYVGDENCLFLNVYTP--STDGAFLPVMIWIHGGGFKWGS 504
+F S N L L +Y P +++ LPV+++ HGGGF +GS
Sbjct: 48 LFKDSIYHKPNNLHLRLYKPISASNRTALPVVVFFHGGGFCFGS 91
>At5g06570.1 68418.m00741 expressed protein similar to PrMC3 [Pinus
radiata] GI:5487873
Length = 329
Score = 33.5 bits (73), Expect = 0.14
Identities = 17/44 (38%), Positives = 26/44 (59%), Gaps = 2/44 (4%)
Frame = +1
Query: 379 VFAKSYVGDENCLFLNVYTP--STDGAFLPVMIWIHGGGFKWGS 504
+F S N L L +Y P +++ LPV+++ HGGGF +GS
Sbjct: 48 LFKDSIYHKPNNLHLRLYKPISASNRTALPVVVFFHGGGFCFGS 91
>At2g45600.1 68415.m05670 expressed protein low similarity to PrMC3
[Pinus radiata] GI:5487873
Length = 329
Score = 32.7 bits (71), Expect = 0.25
Identities = 24/93 (25%), Positives = 44/93 (47%), Gaps = 5/93 (5%)
Frame = +1
Query: 409 NCLFLNVYTPST--DGAFLPVMIWIHGGGFKWGSGNTNLYGPDF--LVDR-DVVVMTINY 573
N F+ ++ P + LP++++ HGGGF S + + + DR +++++ Y
Sbjct: 48 NNTFIRIFKPRNIPPESKLPILVYFHGGGFILYSAASAPFHESCTKMADRLQTIILSVEY 107
Query: 574 RCGALGFLSLNTPEVPGNAGIKDIVQAIRWVKD 672
R PE A +D V+AI W++D
Sbjct: 108 RL---------APEHRLPAAYEDAVEAILWLRD 131
>At1g47480.1 68414.m05267 expressed protein similar to PrMC3 [Pinus
radiata] GI:5487873
Length = 314
Score = 32.7 bits (71), Expect = 0.25
Identities = 27/94 (28%), Positives = 47/94 (50%), Gaps = 10/94 (10%)
Frame = +1
Query: 325 DGIRDATAEGNVCAQ-IDP---VFAKSYVGDENC-LFLNVYTPST--DGAFLPVMIWIHG 483
DG + A VC +DP VF+K + + L +Y P + G +P+M++ HG
Sbjct: 21 DGTVERLAGTEVCPPGLDPITGVFSKDIIIEPKTGLSARIYRPFSIQPGQKIPLMLYFHG 80
Query: 484 GGFKWGSGNTNLYGPDF--LVDR-DVVVMTINYR 576
G F S + Y +V++ +V+ +++NYR
Sbjct: 81 GAFLISSTSFPSYHTSLNKIVNQANVIAVSVNYR 114
>At1g49650.1 68414.m05568 cell death associated protein-related
similar to PrMC3 [Pinus radiata] GI:5487873; weak
similarity to cell death associated protein [Nicotiana
tabacum] GI:7417008, hsr203J [Nicotiana tabacum]
GI:22830761
Length = 374
Score = 31.5 bits (68), Expect = 0.58
Identities = 24/73 (32%), Positives = 37/73 (50%)
Frame = +1
Query: 448 GAFLPVMIWIHGGGFKWGSGNTNLYGPDFLVDRDVVVMTINYRCGALGFLSLNTPEVPGN 627
G LP++I+ HGG + S + +Y +FL + VV + N C A+ PE P
Sbjct: 125 GNKLPLLIYFHGGAWINESPFSPIYH-NFLTE---VVKSAN--CLAVSVQYRRAPEDPVP 178
Query: 628 AGIKDIVQAIRWV 666
A +D AI+W+
Sbjct: 179 AAYEDTWSAIQWI 191
>At2g03550.1 68415.m00315 expressed protein similar to PrMC3 [Pinus
radiata] GI:5487873; contains an
esterase/lipase/thioesterase active site serine domain
(prosite: PS50187)
Length = 312
Score = 31.1 bits (67), Expect = 0.77
Identities = 25/92 (27%), Positives = 38/92 (41%), Gaps = 1/92 (1%)
Frame = +1
Query: 406 ENCLFLNVYTPS-TDGAFLPVMIWIHGGGFKWGSGNTNLYGPDFLVDRDVVVMTINYRCG 582
E L L +Y P LP++I+ HGGGF + + P + V N C
Sbjct: 50 EKNLSLRIYLPEKVTVKKLPILIYFHGGGFIIETA----FSPPYHTFLTSAVAAAN--CL 103
Query: 583 ALGFLSLNTPEVPGNAGIKDIVQAIRWVKDNI 678
A+ PE P +D +++WV +I
Sbjct: 104 AISVNYRRAPEFPVPIPYEDSWDSLKWVLTHI 135
>At5g13100.1 68418.m01501 expressed protein
Length = 354
Score = 30.3 bits (65), Expect = 1.4
Identities = 14/44 (31%), Positives = 24/44 (54%)
Frame = +1
Query: 397 VGDENCLFLNVYTPSTDGAFLPVMIWIHGGGFKWGSGNTNLYGP 528
V +ENC+F + P ++ +PV +++ G G W G + Y P
Sbjct: 295 VEEENCVFFLPHKPRSEVLEVPVFLFMKGTG--WCGGGADHYEP 336
>At1g50300.1 68414.m05639 zinc finger (Ran-binding) family protein /
RNA recognition motif (RRM)-containing protein similar
to SP|Q27294 RNA-binding protein cabeza {Drosophila
melanogaster}; contains Pfam profiles: PF00076 RNA
recognition motif (aka RRM, RBD, or RNP domain),
PF00641: Zn-finger in Ran binding protein and others
Length = 372
Score = 30.3 bits (65), Expect = 1.4
Identities = 17/45 (37%), Positives = 19/45 (42%), Gaps = 1/45 (2%)
Frame = -3
Query: 314 GDCGALNRKEPNGGFAYGIPWKL*KAFPDGLFTIRPWSCP-CSTV 183
G GA + GG G P K P GLF W+CP C V
Sbjct: 171 GSMGAGRGRGRGGGADGGAPGKQPSGAPTGLFGPNDWACPMCGNV 215
>At4g21430.1 68417.m03097 transcription factor jumonji (jmjC)
domain-containing protein contains Pfam domain, PF02373:
jmjC domain
Length = 728
Score = 29.9 bits (64), Expect = 1.8
Identities = 14/39 (35%), Positives = 23/39 (58%)
Frame = -3
Query: 296 NRKEPNGGFAYGIPWKL*KAFPDGLFTIRPWSCPCSTVT 180
N+K+ NGGF+ + +L + P+G+ I P S S V+
Sbjct: 137 NKKKSNGGFSEFVGEELTRVLPNGIMAISPPSPTTSNVS 175
>At3g48690.1 68416.m05317 expressed protein similar to PrMC3 [Pinus
radiata] GI:5487873
Length = 324
Score = 29.9 bits (64), Expect = 1.8
Identities = 27/99 (27%), Positives = 41/99 (41%), Gaps = 4/99 (4%)
Frame = +1
Query: 394 YVGDENCLFLNVYTPSTDGAF----LPVMIWIHGGGFKWGSGNTNLYGPDFLVDRDVVVM 561
Y D N L + +Y P A LP++++ HGGGF + + P + V
Sbjct: 47 YSADNN-LSVRIYLPEKAAAETDSKLPLLVYFHGGGFIIETA----FSPTYHTFLTTSVS 101
Query: 562 TINYRCGALGFLSLNTPEVPGNAGIKDIVQAIRWVKDNI 678
N C A+ PE P + D A++WV +I
Sbjct: 102 ASN--CVAVSVDYRRAPEHPISVPFDDSWTALKWVFTHI 138
>At3g59030.1 68416.m06579 transparent testa 12 protein (TT12) /
multidrug transporter-like protein similar to ripening
regulated protein DDTFR18 [Lycopersicon esculentum]
GI:12231296, putative multidrug efflux protein NorM -
Vibrio parahaemolyticus, EMBL:AB010463; contains Pfam
profile PF01554: Uncharacterized membrane protein
family; identical to cDNA multidrug transporter-like
protein (tt12) GI:13624642, SP|Q9LYT3 TRANSPARENT TESTA
12 protein {Arabidopsis thaliana}, multidrug
transporter-like protein [Arabidopsis thaliana]
GI:13624643
Length = 507
Score = 29.5 bits (63), Expect = 2.4
Identities = 8/22 (36%), Positives = 16/22 (72%)
Frame = +3
Query: 462 GHDLDPRWWVQVGIRQYQLVWT 527
G + PRWW+++ + + +L+WT
Sbjct: 36 GSTVTPRWWLKLAVWESKLLWT 57
>At5g62180.1 68418.m07805 expressed protein similar to PrMC3, Pinus
radiata, GI:5487873
Length = 327
Score = 29.1 bits (62), Expect = 3.1
Identities = 25/75 (33%), Positives = 39/75 (52%), Gaps = 4/75 (5%)
Frame = +1
Query: 457 LPVMIWIHGGGFKWGSGNTNLYGPDFL--VDRDV--VVMTINYRCGALGFLSLNTPEVPG 624
LP++++ HGGGF S + L+ DF V RD+ +V++ +YR PE
Sbjct: 80 LPIVVYYHGGGFILCSVDMQLF-HDFCSEVARDLNAIVVSPSYRL---------APEHRL 129
Query: 625 NAGIKDIVQAIRWVK 669
A D V+A+ W+K
Sbjct: 130 PAAYDDGVEALDWIK 144
>At3g23710.1 68416.m02981 chloroplast inner membrane import protein
Tic22, putative similar to Tic22 [Pisum sativum]
gi|3769671|gb|AAC64606; contains Pfam domain PF04278:
Tic22-like family
Length = 313
Score = 29.1 bits (62), Expect = 3.1
Identities = 14/45 (31%), Positives = 23/45 (51%)
Frame = +1
Query: 19 LSHECSE*IKHLCNELNKILINNSGVNNEFPTMISAVNEFLDDLR 153
L +CS + ++ LN + N+ NN P + SA+N F D +
Sbjct: 25 LQSQCSNLLLNVSQTLNPLF--NANTNNNKPNIFSALNSFRDQAK 67
>At1g58227.1 68414.m06616 hypothetical protein
Length = 1323
Score = 29.1 bits (62), Expect = 3.1
Identities = 22/80 (27%), Positives = 39/80 (48%)
Frame = +1
Query: 13 LFLSHECSE*IKHLCNELNKILINNSGVNNEFPTMISAVNEFLDDLRGGRMSESPLVTVE 192
+FLSH C + + +L ++++L+ G FP + + +E L L G R E P + ++
Sbjct: 1241 IFLSHPCRDNVLYLLRLVDEMLVREFGSRLLFPAISTDFSEDLLQL-GNR--EDPTLGLD 1297
Query: 193 QGQLQGRIVNSPSGKAFYSF 252
+ Q + S A Y F
Sbjct: 1298 E-SFQRFLTEEISRYAVYKF 1316
>At1g19190.1 68414.m02389 expressed protein contains similarity to
anther-specific and pathogenesis response protein
(PrMC3) GI:5487873 from [Pinus radiata]
Length = 318
Score = 28.7 bits (61), Expect = 4.1
Identities = 27/104 (25%), Positives = 44/104 (42%), Gaps = 9/104 (8%)
Frame = +1
Query: 406 ENCLFLNVYTPS-----TDGAFLPVMIWIHGGGFKWGSGNTNLYGPDFLVD----RDVVV 558
E L L +Y P T +P++++ HGGGF + + +Y FL D +
Sbjct: 50 EKNLSLRIYLPQNSVYETGEKKIPLLVYFHGGGFIMETAFSPIY-HTFLTSAVSATDCIA 108
Query: 559 MTINYRCGALGFLSLNTPEVPGNAGIKDIVQAIRWVKDNIHHFG 690
+++ YR PE P +D AI+W+ +I G
Sbjct: 109 VSVEYR---------RAPEHPIPTLYEDSWDAIQWIFTHITRSG 143
>At3g52250.1 68416.m05742 myb family transcription factor contains
Pfam profile: PF00249 myb-like DNA-binding domain
Length = 1677
Score = 28.3 bits (60), Expect = 5.5
Identities = 11/26 (42%), Positives = 19/26 (73%)
Frame = +1
Query: 46 KHLCNELNKILINNSGVNNEFPTMIS 123
K+LC + + L+NN+ VN FP+++S
Sbjct: 1244 KYLCLKDDNNLVNNAYVNGGFPSLVS 1269
>At3g59610.1 68416.m06651 F-box family protein / jacalin lectin
family protein contains Pfam profile PF01419:
Jacalin-like lectin domain
Length = 521
Score = 27.9 bits (59), Expect = 7.2
Identities = 11/29 (37%), Positives = 16/29 (55%)
Frame = +1
Query: 493 KWGSGNTNLYGPDFLVDRDVVVMTINYRC 579
+W S + N Y P + VD D V +T+ C
Sbjct: 290 EWSSLSVNYYPPSYFVDEDKVGLTLVICC 318
>At1g12350.1 68414.m01427 DNA/panthothenate metabolism flavoprotein
family protein contains Pfam domain PF04127: DNA /
pantothenate metabolism flavoprotein
Length = 317
Score = 27.9 bits (59), Expect = 7.2
Identities = 16/39 (41%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Frame = +3
Query: 159 QDVRVASSHSGARAAPGTDRKQPVREG-LLQFPRNTICE 272
++++V SHSGA D++ V EG LL+ P +TI E
Sbjct: 123 KNIQVHGSHSGAVKMAVMDQQAAVAEGRLLKLPFSTIYE 161
>At1g12050.1 68414.m01391 fumarylacetoacetase, putative similar to
fumarylacetoacetase (Fumarylacetoacetate hydrolase,
Beta-diketonase, FAA)[Rattus norvegicus]
SWISS-PROT:P25093
Length = 421
Score = 27.9 bits (59), Expect = 7.2
Identities = 13/37 (35%), Positives = 20/37 (54%)
Frame = +2
Query: 290 CDLRPHNLQNPGTASGMPRRKGTCVLKSIQSSRNPMS 400
C+LRP +L GT SG C+L+ + + P+S
Sbjct: 343 CNLRPGDLLGTGTISGPEPDSYGCLLELTWNGQKPLS 379
>At5g03280.1 68418.m00277 ethylene-insensitive 2 (EIN2) identical to
EIN2 [Arabidopsis thaliana] gi|5231113|gb|AAD41076;
member of the natural resistance-associated macrophage
protein (NRAMP) metal transporter family, PMID:11500563;
metal transport capacity has not been shown,
PMID:11500563, PMID:1038174
Length = 1294
Score = 27.5 bits (58), Expect = 9.5
Identities = 22/72 (30%), Positives = 31/72 (43%)
Frame = +1
Query: 139 LDDLRGGRMSESPLVTVEQGQLQGRIVNSPSGKAFYSFQGIPYAKPPLGSLRFKAPQSPE 318
+D L G + SP V + Q+ G N+ + Y Y+ SLR AP S E
Sbjct: 758 IDSLYGLQRGSSPSPLVNRMQMLGAYGNTTNNNNAYELSERRYS-----SLR--APSSSE 810
Query: 319 PWDGIRDATAEG 354
W+ + AT G
Sbjct: 811 GWEHQQPATVHG 822
>At3g48700.1 68416.m05318 expressed protein similar to PrMC3 [Pinus
radiata] GI:5487873
Length = 329
Score = 27.5 bits (58), Expect = 9.5
Identities = 28/102 (27%), Positives = 45/102 (44%), Gaps = 11/102 (10%)
Frame = +1
Query: 406 ENCLFLNVYTPS------TDGAF-LPVMIWIHGGGFKWGSGNTNLYGPDFLV----DRDV 552
+N L L +Y P T+ + LP++++ HGGGF + + Y FL D
Sbjct: 50 DNNLSLRIYLPEKAATAETEASVKLPLLVYFHGGGFLVETAFSPTY-HTFLTAAVSASDC 108
Query: 553 VVMTINYRCGALGFLSLNTPEVPGNAGIKDIVQAIRWVKDNI 678
V ++++YR PE P D A++WV +I
Sbjct: 109 VAVSVDYR---------RAPEHPIPTSYDDSWTALKWVFSHI 141
>At3g07390.1 68416.m00881 auxin-responsive protein / auxin-induced
protein (AIR12) identical (with 7 residue gap) to
auxin-induced protein AIR12 GI:11357190 [Arabidopsis
thaliana]
Length = 273
Score = 27.5 bits (58), Expect = 9.5
Identities = 25/95 (26%), Positives = 38/95 (40%)
Frame = +1
Query: 349 EGNVCAQIDPVFAKSYVGDENCLFLNVYTPSTDGAFLPVMIWIHGGGFKWGSGNTNLYGP 528
EG + + A+S G +F V P+ GA +W GG G + +GP
Sbjct: 144 EGKLAFDFWNLRAESLSGGRIAIFTTVKVPA--GADSVNQVWQIGGNVTNGRPGVHPFGP 201
Query: 529 DFLVDRDVVVMTINYRCGALGFLSLNTPEVPGNAG 633
D L V+ T + G+ S + PG +G
Sbjct: 202 DNLGSHRVLSFTEDAAPGSAP--SPGSAPAPGTSG 234
>At2g38080.1 68415.m04674 laccase, putative / diphenol oxidase,
putative similar to diphenol oxidase [Nicotiana
tabacum][GI:1685087]
Length = 558
Score = 27.5 bits (58), Expect = 9.5
Identities = 12/43 (27%), Positives = 22/43 (51%)
Frame = -2
Query: 324 PGFWRLWGLKSQRTQWGFRIWYSLETVEGLPGRAVYDPSLELP 196
PG W + T WG ++ + +E +G P +++ P +LP
Sbjct: 515 PGVWFMHCHLEVHTTWGLKMAFLVENGKG-PNQSILPPPKDLP 556
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,189,949
Number of Sequences: 28952
Number of extensions: 452613
Number of successful extensions: 1095
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 1052
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1087
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1575119672
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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