Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30113
         (727 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine vasopre...    24   1.4  
AJ005422-1|CAA06528.1|  287|Tribolium castaneum caudal protein p...    24   1.4  
AJ005421-1|CAA06527.1|  249|Tribolium castaneum caudal protein p...    24   1.4  
AY074761-1|AAL71874.1|  314|Tribolium castaneum ultrabithorax pr...    23   3.3  
EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450 ...    22   5.8  
EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock prote...    22   5.8  
AY695257-1|AAW21974.1|  224|Tribolium castaneum intermediate neu...    22   5.8  

>EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine
           vasopressin receptor protein.
          Length = 403

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 11/24 (45%), Positives = 16/24 (66%)
 Frame = -1

Query: 337 IAQVITLYVTSFYACSEPFIIARL 266
           + Q I + V  + ACS PFI+A+L
Sbjct: 263 VKQTIAVIVM-YIACSTPFILAQL 285


>AJ005422-1|CAA06528.1|  287|Tribolium castaneum caudal protein
           protein.
          Length = 287

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 7/17 (41%), Positives = 13/17 (76%)
 Frame = +2

Query: 314 IEGYHLGYHRGAELGRE 364
           +  ++ GYH+GA++G E
Sbjct: 25  MHSWYAGYHQGAQMGPE 41


>AJ005421-1|CAA06527.1|  249|Tribolium castaneum caudal protein
           protein.
          Length = 249

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 7/17 (41%), Positives = 13/17 (76%)
 Frame = +2

Query: 314 IEGYHLGYHRGAELGRE 364
           +  ++ GYH+GA++G E
Sbjct: 25  MHSWYAGYHQGAQMGPE 41


>AY074761-1|AAL71874.1|  314|Tribolium castaneum ultrabithorax
           protein.
          Length = 314

 Score = 22.6 bits (46), Expect = 3.3
 Identities = 10/31 (32%), Positives = 17/31 (54%)
 Frame = +2

Query: 515 LGMADAVRAQYKKACALLKIPSNNPYDAGVS 607
           LGM+    +Q+       + P ++PYDA V+
Sbjct: 43  LGMSPYASSQHHHHHLQARPPQDSPYDASVA 73


>EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450
           protein.
          Length = 493

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 9/30 (30%), Positives = 15/30 (50%)
 Frame = -3

Query: 413 FHLVQGIHLLCSSRNLAHDPVQHPDDSPSD 324
           F L +G+ ++     L +DP  +PD    D
Sbjct: 381 FTLDKGVSIMVPISGLHYDPEYYPDPEKYD 410


>EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock protein
           90 protein.
          Length = 721

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 8/20 (40%), Positives = 15/20 (75%)
 Frame = -1

Query: 337 IAQVITLYVTSFYACSEPFI 278
           IAQ+++L + +FY+  E F+
Sbjct: 19  IAQLMSLIINTFYSNKEIFL 38


>AY695257-1|AAW21974.1|  224|Tribolium castaneum intermediate
           neuroblasts defectiveprotein protein.
          Length = 224

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 11/21 (52%), Positives = 13/21 (61%)
 Frame = -2

Query: 522 IPSMSWSSELLGGKVSISSLT 460
           IPS   SS +L  KVS+S  T
Sbjct: 77  IPSPKRSSPILAEKVSVSPTT 97


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 152,590
Number of Sequences: 336
Number of extensions: 3079
Number of successful extensions: 11
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19363530
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)