Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30113
         (727 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC065542-1|AAH65542.1|  137|Homo sapiens oral cancer overexpress...    53   9e-07
BC019024-1|AAH19024.4|  137|Homo sapiens oral cancer overexpress...    53   9e-07
AF503940-1|AAM97902.1|  137|Homo sapiens TAOS1 protein.                53   9e-07
EF639695-1|ABR37294.1|   70|Homo sapiens oral cancer overexpress...    37   0.085
CR457198-1|CAG33479.1|  226|Homo sapiens C7orf36 protein.              30   9.7  
AF226046-1|AAF86946.1|  226|Homo sapiens GK003 protein.                30   9.7  
AC011290-1|AAQ96864.1|  226|Homo sapiens unknown protein.              30   9.7  

>BC065542-1|AAH65542.1|  137|Homo sapiens oral cancer overexpressed
           1 protein.
          Length = 137

 Score = 53.2 bits (122), Expect = 9e-07
 Identities = 35/119 (29%), Positives = 61/119 (51%), Gaps = 2/119 (1%)
 Frame = +2

Query: 224 DVLDDIVLGEEKESKSSYDEGFRAGIEAGNIEGYHLGYHRGAELGRELGFY--WSTVNEC 397
           D+ D IV+ +E+     Y EG+  G   G +EG   G   GA++G E+G Y  ++   +C
Sbjct: 6   DIFDAIVMADERFHGEGYREGYEEGSSLGVMEGRQHGTLHGAKIGSEIGCYQGFAFAWKC 65

Query: 398 LELNETSDAKLSEKIIAQLLKVKELIDTFPPNNSEDHDILGMADAVRAQYKKACALLKI 574
           L L+  +  K S K +  L  +  +I  FP ++     +    D +R ++K+ C+LL +
Sbjct: 66  L-LHSCTTEKDSRK-MKVLESLIGMIQKFPYDDPTYDKLHEDLDKIRGKFKQFCSLLNV 122


>BC019024-1|AAH19024.4|  137|Homo sapiens oral cancer overexpressed
           1 protein.
          Length = 137

 Score = 53.2 bits (122), Expect = 9e-07
 Identities = 35/119 (29%), Positives = 61/119 (51%), Gaps = 2/119 (1%)
 Frame = +2

Query: 224 DVLDDIVLGEEKESKSSYDEGFRAGIEAGNIEGYHLGYHRGAELGRELGFY--WSTVNEC 397
           D+ D IV+ +E+     Y EG+  G   G +EG   G   GA++G E+G Y  ++   +C
Sbjct: 6   DIFDAIVMADERFHGEGYREGYEEGSSLGVMEGRQHGTLHGAKIGSEIGCYQGFAFAWKC 65

Query: 398 LELNETSDAKLSEKIIAQLLKVKELIDTFPPNNSEDHDILGMADAVRAQYKKACALLKI 574
           L L+  +  K S K +  L  +  +I  FP ++     +    D +R ++K+ C+LL +
Sbjct: 66  L-LHSCTTEKDSRK-MKVLESLIGMIQKFPYDDPTYDKLHEDLDKIRGKFKQFCSLLNV 122


>AF503940-1|AAM97902.1|  137|Homo sapiens TAOS1 protein.
          Length = 137

 Score = 53.2 bits (122), Expect = 9e-07
 Identities = 35/119 (29%), Positives = 61/119 (51%), Gaps = 2/119 (1%)
 Frame = +2

Query: 224 DVLDDIVLGEEKESKSSYDEGFRAGIEAGNIEGYHLGYHRGAELGRELGFY--WSTVNEC 397
           D+ D IV+ +E+     Y EG+  G   G +EG   G   GA++G E+G Y  ++   +C
Sbjct: 6   DIFDAIVMADERFHGEGYREGYEEGSSLGVMEGRQHGTLHGAKIGSEIGCYQGFAFAWKC 65

Query: 398 LELNETSDAKLSEKIIAQLLKVKELIDTFPPNNSEDHDILGMADAVRAQYKKACALLKI 574
           L L+  +  K S K +  L  +  +I  FP ++     +    D +R ++K+ C+LL +
Sbjct: 66  L-LHSCTTEKDSRK-MKVLESLIGMIQKFPYDDPTYDKLHEDLDKIRGKFKQFCSLLNV 122


>EF639695-1|ABR37294.1|   70|Homo sapiens oral cancer overexpressed
           protein 1-A protein.
          Length = 70

 Score = 36.7 bits (81), Expect = 0.085
 Identities = 17/47 (36%), Positives = 25/47 (53%)
 Frame = +2

Query: 224 DVLDDIVLGEEKESKSSYDEGFRAGIEAGNIEGYHLGYHRGAELGRE 364
           D+ D IV+ +E+     Y EG+  G   G +EG   G   GA++G E
Sbjct: 6   DIFDAIVMADERFHGEGYREGYEEGSSLGVMEGRQHGTLHGAKIGSE 52


>CR457198-1|CAG33479.1|  226|Homo sapiens C7orf36 protein.
          Length = 226

 Score = 29.9 bits (64), Expect = 9.7
 Identities = 19/68 (27%), Positives = 35/68 (51%), Gaps = 7/68 (10%)
 Frame = +2

Query: 218 FNDVLDDIVLGE---EKESKSSYDEGFRAGIEAGNI----EGYHLGYHRGAELGRELGFY 376
           F++  D+ +L +   +   +    EG+R GI+AG      +G++ GY +GAE+    G  
Sbjct: 20  FDEEADESLLAQREWQSNMQRRVKEGYRDGIDAGKAVTLQQGFNQGYKKGAEVILNYGRL 79

Query: 377 WSTVNECL 400
             T++  L
Sbjct: 80  RGTLSALL 87


>AF226046-1|AAF86946.1|  226|Homo sapiens GK003 protein.
          Length = 226

 Score = 29.9 bits (64), Expect = 9.7
 Identities = 19/68 (27%), Positives = 35/68 (51%), Gaps = 7/68 (10%)
 Frame = +2

Query: 218 FNDVLDDIVLGE---EKESKSSYDEGFRAGIEAGNI----EGYHLGYHRGAELGRELGFY 376
           F++  D+ +L +   +   +    EG+R GI+AG      +G++ GY +GAE+    G  
Sbjct: 20  FDEEADESLLAQREWQSNMQRRVKEGYRDGIDAGKAVTLQQGFNQGYKKGAEVILNYGRL 79

Query: 377 WSTVNECL 400
             T++  L
Sbjct: 80  RGTLSALL 87


>AC011290-1|AAQ96864.1|  226|Homo sapiens unknown protein.
          Length = 226

 Score = 29.9 bits (64), Expect = 9.7
 Identities = 19/68 (27%), Positives = 35/68 (51%), Gaps = 7/68 (10%)
 Frame = +2

Query: 218 FNDVLDDIVLGE---EKESKSSYDEGFRAGIEAGNI----EGYHLGYHRGAELGRELGFY 376
           F++  D+ +L +   +   +    EG+R GI+AG      +G++ GY +GAE+    G  
Sbjct: 20  FDEEADESLLAQREWQSNMQRRVKEGYRDGIDAGKAVTLQQGFNQGYKKGAEVILNYGRL 79

Query: 377 WSTVNECL 400
             T++  L
Sbjct: 80  RGTLSALL 87


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 87,219,804
Number of Sequences: 237096
Number of extensions: 1566186
Number of successful extensions: 7377
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7300
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7362
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8567175942
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)