Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30113
         (727 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE013599-1413|AAF58560.2|  141|Drosophila melanogaster CG13175-P...    89   6e-18
BT011410-1|AAR96202.1| 1887|Drosophila melanogaster AT19428p pro...    29   8.5  
AE014298-3007|AAF50916.1|  110|Drosophila melanogaster CG15460-P...    29   8.5  
AE014297-4235|AAF56793.2| 5106|Drosophila melanogaster CG1842-PA...    29   8.5  

>AE013599-1413|AAF58560.2|  141|Drosophila melanogaster CG13175-PA,
           isoform A protein.
          Length = 141

 Score = 89.0 bits (211), Expect = 6e-18
 Identities = 48/120 (40%), Positives = 68/120 (56%)
 Frame = +2

Query: 209 SKDFNDVLDDIVLGEEKESKSSYDEGFRAGIEAGNIEGYHLGYHRGAELGRELGFYWSTV 388
           S+D ND+ DDIVL EEKE++  Y+EG + G E GN EGY LGY +G  LG ELG     V
Sbjct: 5   SRDINDLFDDIVLTEEKEARLGYEEGLKDGQEQGNEEGYKLGYAQGVSLGEELGKILGQV 64

Query: 389 NECLELNETSDAKLSEKIIAQLLKVKELIDTFPPNNSEDHDILGMADAVRAQYKKACALL 568
               +L  T      +K+   L +++ LI+ FP  N    DI+G    +R+ +++  A L
Sbjct: 65  VAQQQLKHT------DKVRRSLEQLRSLIEEFPRTNDPQADIVGAVQDIRSSHRRLRAQL 118


>BT011410-1|AAR96202.1| 1887|Drosophila melanogaster AT19428p
           protein.
          Length = 1887

 Score = 28.7 bits (61), Expect = 8.5
 Identities = 16/45 (35%), Positives = 21/45 (46%)
 Frame = +2

Query: 467 ELIDTFPPNNSEDHDILGMADAVRAQYKKACALLKIPSNNPYDAG 601
           E+ + FPP   E+H   G  DA  A+ +    LL  PS    D G
Sbjct: 78  EVAERFPPTFEEEH---GFIDAAAAEAEAQARLLYEPSKADIDGG 119


>AE014298-3007|AAF50916.1|  110|Drosophila melanogaster CG15460-PA
           protein.
          Length = 110

 Score = 28.7 bits (61), Expect = 8.5
 Identities = 15/49 (30%), Positives = 25/49 (51%), Gaps = 3/49 (6%)
 Frame = +2

Query: 380 STVNECLELNETSDAKLSEKIIAQLLKVKELIDTFPPNNS---EDHDIL 517
           +TVN+  +    +D  L   +IA L  +  ++D   PN S   E+H+ L
Sbjct: 52  NTVNKSAQTASVNDGNLQASVIAMLAGMDSILDMEQPNRSPSREEHERL 100


>AE014297-4235|AAF56793.2| 5106|Drosophila melanogaster CG1842-PA
            protein.
          Length = 5106

 Score = 28.7 bits (61), Expect = 8.5
 Identities = 16/45 (35%), Positives = 21/45 (46%)
 Frame = +2

Query: 467  ELIDTFPPNNSEDHDILGMADAVRAQYKKACALLKIPSNNPYDAG 601
            E+ + FPP   E+H   G  DA  A+ +    LL  PS    D G
Sbjct: 3291 EVAERFPPTFEEEH---GFIDAAAAEAEAQARLLYEPSKADIDGG 3332


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,104,879
Number of Sequences: 53049
Number of extensions: 500388
Number of successful extensions: 1058
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1027
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1058
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3252477558
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)