Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30113
         (727 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z75547-11|CAA99905.4|  394|Caenorhabditis elegans Hypothetical p...    31   0.84 
AF067943-3|AAC17664.1|  266|Caenorhabditis elegans Hypothetical ...    31   0.84 
AF016665-7|AAL02469.1|  110|Caenorhabditis elegans Skn-1 depende...    28   5.9  
Z81531-7|CAB04320.1|  722|Caenorhabditis elegans Hypothetical pr...    28   7.8  
Z70307-1|CAA94334.1|  205|Caenorhabditis elegans Hypothetical pr...    28   7.8  
U42847-4|AAF23186.1| 1073|Caenorhabditis elegans Immunoglobulin-...    28   7.8  

>Z75547-11|CAA99905.4|  394|Caenorhabditis elegans Hypothetical
           protein R11D1.10a protein.
          Length = 394

 Score = 31.1 bits (67), Expect = 0.84
 Identities = 16/56 (28%), Positives = 28/56 (50%), Gaps = 3/56 (5%)
 Frame = +2

Query: 350 ELGRELGFYWSTVNECLELNETSD---AKLSEKIIAQLLKVKELIDTFPPNNSEDH 508
           ++ +E+G +W   NE L ++E  D     L E+   ++L   E  +  PP  SE +
Sbjct: 312 KITKEIGGFWDRRNEKLSVDEDEDEDEKSLDEETFKKILHEAENSEDLPPQTSESN 367


>AF067943-3|AAC17664.1|  266|Caenorhabditis elegans Hypothetical
           protein F59B1.4 protein.
          Length = 266

 Score = 31.1 bits (67), Expect = 0.84
 Identities = 17/61 (27%), Positives = 31/61 (50%), Gaps = 4/61 (6%)
 Frame = -2

Query: 201 ISRHSLATFWWSPFSIFVSG*VIY----VLNLYYQCASNKFFVFKLNSSDYFLFCVILV* 34
           I+ + L  FW +   IF+    +Y    +L +  +  + K  +F  ++  Y++FCVIL  
Sbjct: 71  IANNLLNAFWSAAIWIFLFAGFVYFTFMILVVRLKIVARKGKIFDFSNRSYYIFCVILAL 130

Query: 33  Y 31
           Y
Sbjct: 131 Y 131


>AF016665-7|AAL02469.1|  110|Caenorhabditis elegans Skn-1 dependent
           zygotic transcriptprotein 7 protein.
          Length = 110

 Score = 28.3 bits (60), Expect = 5.9
 Identities = 13/36 (36%), Positives = 23/36 (63%)
 Frame = +3

Query: 570 RYLQTIHMMQESHSKRKDSMKTTIRSLCHNIDSIIN 677
           R LQT+  +Q   +   + +K  +RSL HN+++I+N
Sbjct: 27  RCLQTL--LQNPKTSAIEELKKPVRSLSHNLNTILN 60


>Z81531-7|CAB04320.1|  722|Caenorhabditis elegans Hypothetical
           protein F36D3.8 protein.
          Length = 722

 Score = 27.9 bits (59), Expect = 7.8
 Identities = 14/37 (37%), Positives = 21/37 (56%)
 Frame = +2

Query: 500 EDHDILGMADAVRAQYKKACALLKIPSNNPYDAGVSF 610
           ED +++G+  A+  Q KK C L  I ++NP  A   F
Sbjct: 242 EDGNVIGIGQAIVYQTKKDCNLGPIYADNPRVAQAMF 278


>Z70307-1|CAA94334.1|  205|Caenorhabditis elegans Hypothetical
           protein C39E9.1 protein.
          Length = 205

 Score = 27.9 bits (59), Expect = 7.8
 Identities = 10/18 (55%), Positives = 12/18 (66%)
 Frame = -3

Query: 605 RLLHHMDCLKVSLTKHKP 552
           ++ HH DCL  SL KH P
Sbjct: 56  KIEHHTDCLSSSLRKHMP 73


>U42847-4|AAF23186.1| 1073|Caenorhabditis elegans
           Immunoglobulin-like cell adhesionmolecule family protein
           1 protein.
          Length = 1073

 Score = 27.9 bits (59), Expect = 7.8
 Identities = 15/48 (31%), Positives = 22/48 (45%)
 Frame = +2

Query: 392 ECLELNETSDAKLSEKIIAQLLKVKELIDTFPPNNSEDHDILGMADAV 535
           EC   NE  +     K++ Q +    + ++  PN  ED DIL    AV
Sbjct: 311 ECRSTNELGEGTAVLKMVVQHIPRINVPESISPNEMEDIDILCEVSAV 358


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,358,680
Number of Sequences: 27780
Number of extensions: 274970
Number of successful extensions: 743
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 720
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 743
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1708383636
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)