Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30113
         (727 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At2g20830.2 68415.m02454 expressed protein weak similarity to fo...    55   6e-08
At3g15750.1 68416.m01995 expressed protein                             30   1.8  
At2g31540.1 68415.m03853 GDSL-motif lipase/hydrolase family prot...    29   2.4  
At5g43810.1 68418.m05357 pinhead protein (PINHEAD) / zwille prot...    27   9.6  

>At2g20830.2 68415.m02454 expressed protein weak similarity to
           formiminotransferase cyclodeaminase (GI:3980064) [Gallus
           gallus]
          Length = 431

 Score = 54.8 bits (126), Expect = 6e-08
 Identities = 37/118 (31%), Positives = 56/118 (47%), Gaps = 3/118 (2%)
 Frame = +2

Query: 224 DVLDDIVLGEEKESKSSYDEGFRAGIEAGNIEGYHLGYHRGAELGRELGFY---WSTVNE 394
           D LD IV  EE   +  +DEG+  G+ +G  +  HLG   G E G  +GFY    +  N 
Sbjct: 8   DFLDCIVRLEETHVQQGFDEGYEEGLVSGREDARHLGLKLGFETGELIGFYRGCSALWNS 67

Query: 395 CLELNETSDAKLSEKIIAQLLKVKELIDTFPPNNSEDHDILGMADAVRAQYKKACALL 568
            L ++ T   + S ++   L     L+D  P  + ED    G+ D +R ++   CA L
Sbjct: 68  ALRIDPT---RFSPQLHKHLNDFHVLLDKIPLLDPEDEAKDGIKDDLRVKFSIICASL 122


>At3g15750.1 68416.m01995 expressed protein 
          Length = 186

 Score = 29.9 bits (64), Expect = 1.8
 Identities = 24/83 (28%), Positives = 34/83 (40%), Gaps = 6/83 (7%)
 Frame = +2

Query: 209 SKDFNDVLDDIVLGEEKESK------SSYDEGFRAGIEAGNIEGYHLGYHRGAELGRELG 370
           S D  D  +  VLG E + +      + Y +G  AG EA   EGY+ GY      G + G
Sbjct: 19  SSDEEDYSEARVLGNENKQRRVKFHSAGYRDGIVAGKEAIAQEGYNFGYKESVLNGYQFG 78

Query: 371 FYWSTVNECLELNETSDAKLSEK 439
                 +    L +    KL +K
Sbjct: 79  LVRGVSSALAFLPDELREKLIDK 101


>At2g31540.1 68415.m03853 GDSL-motif lipase/hydrolase family protein
           similar to family II lipases EXL3 GI:15054386, EXL1
           GI:15054382, EXL2 GI:15054384 from [Arabidopsis
           thaliana]; contains Pfam profile PF00657: GDSL-like
           Lipase/Acylhydrolase
          Length = 360

 Score = 29.5 bits (63), Expect = 2.4
 Identities = 16/34 (47%), Positives = 18/34 (52%)
 Frame = +2

Query: 416 SDAKLSEKIIAQLLKVKELIDTFPPNNSEDHDIL 517
           S+ KL   IIA  L +KE I  F   N  D DIL
Sbjct: 78  SNGKLISDIIATKLNIKEFIPPFLQPNLSDQDIL 111


>At5g43810.1 68418.m05357 pinhead protein (PINHEAD) / zwille protein
           (ZWILLE) identical to SP|Q9XGW1 PINHEAD protein (ZWILLE
           protein) {Arabidopsis thaliana}; contains Pfam profiles
           PF02171: Piwi domain, PF02170: PAZ domain
          Length = 988

 Score = 27.5 bits (58), Expect = 9.6
 Identities = 22/62 (35%), Positives = 29/62 (46%), Gaps = 3/62 (4%)
 Frame = +2

Query: 548 KKACALLKIPSNNPYDAGVSF*KK---RFNENNNS*SMSQYRFHNQLPCTIFATGHCHMV 718
           +KACA L+ P+  P    +   K+   R   NN+    S  R  N LP T+  T  CH  
Sbjct: 814 RKACASLE-PNYQPPVTFIVVQKRHHTRLFANNHRDKNSTDRSGNILPGTVVDTKICHPT 872

Query: 719 EF 724
           EF
Sbjct: 873 EF 874


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,340,817
Number of Sequences: 28952
Number of extensions: 246710
Number of successful extensions: 670
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 654
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 666
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1584903024
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)